RNA–Protein interactions for RNA: ENST00000437654.5

IRF1-203, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-203ENST00000437654 AXIN2Q9Y2T1 843 aa24.7■■□□□ 1.54
IRF1-203ENST00000437654 BLMP54132 1417 aaPredicted RBP24.69■■□□□ 1.54
IRF1-203ENST00000437654 FBLN1P23142 703 aa24.69■■□□□ 1.54
IRF1-203ENST00000437654 RRS1Q15050 365 aaKnown RBP24.69■■□□□ 1.54
IRF1-203ENST00000437654 LMO7Q8WWI1 1683 aa24.69■■□□□ 1.54
IRF1-203ENST00000437654 CAMTA1Q9Y6Y1 1673 aa24.69■■□□□ 1.54
IRF1-203ENST00000437654 HOXC9P31274 260 aa24.68■■□□□ 1.54
IRF1-203ENST00000437654 COL18A1P39060 1754 aa24.67■■□□□ 1.54
IRF1-203ENST00000437654 TNNT2P45379 298 aaPredicted RBP24.67■■□□□ 1.54
IRF1-203ENST00000437654 FLT4P35916 1363 aa24.67■■□□□ 1.54
IRF1-203ENST00000437654 PLCH1Q4KWH8 1693 aa24.66■■□□□ 1.54
IRF1-203ENST00000437654 RALBP1Q15311 655 aa24.66■■□□□ 1.54
IRF1-203ENST00000437654 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.66■■□□□ 1.54
IRF1-203ENST00000437654 ATRNO75882 1429 aa24.65■■□□□ 1.54
IRF1-203ENST00000437654 INSRP06213 1382 aa24.65■■□□□ 1.54
IRF1-203ENST00000437654 COL5A2P05997 1499 aaPredicted RBP24.64■■□□□ 1.54
IRF1-203ENST00000437654 GJD4Q96KN9 370 aaPredicted RBP24.64■■□□□ 1.54
IRF1-203ENST00000437654 STRN4Q9NRL3 753 aa24.64■■□□□ 1.54
IRF1-203ENST00000437654 EMILIN1Q9Y6C2 1016 aa24.64■■□□□ 1.54
IRF1-203ENST00000437654 WDR17Q8IZU2 1322 aa24.63■■□□□ 1.53
IRF1-203ENST00000437654 LTN1O94822 1766 aa24.63■■□□□ 1.53
IRF1-203ENST00000437654 RBM6P78332 1123 aaKnown RBP24.63■■□□□ 1.53
IRF1-203ENST00000437654 ERBB3P21860 1342 aa24.62■■□□□ 1.53
IRF1-203ENST00000437654 SMG6Q86US8 1419 aaKnown RBP24.62■■□□□ 1.53
IRF1-203ENST00000437654 RXRBP28702 533 aa24.62■■□□□ 1.53
IRF1-203ENST00000437654 POTEAQ6S8J7 498 aa24.62■■□□□ 1.53
IRF1-203ENST00000437654 PPM1GO15355 546 aaPredicted RBP24.61■■□□□ 1.53
IRF1-203ENST00000437654 ANKRD24Q8TF21 1146 aa24.61■■□□□ 1.53
IRF1-203ENST00000437654 THRAP3Q9Y2W1 955 aaKnown RBP24.61■■□□□ 1.53
IRF1-203ENST00000437654 PARD3Q8TEW0 1356 aa24.61■■□□□ 1.53
IRF1-203ENST00000437654 SPATA31A5Q5VU36 1347 aa24.61■■□□□ 1.53
IRF1-203ENST00000437654 SPATA31A7Q8IWB4 1347 aa24.61■■□□□ 1.53
IRF1-203ENST00000437654 CSB-PGBD3P0DP91 1061 aa24.6■■□□□ 1.53
IRF1-203ENST00000437654 HSP90AB2PQ58FF8 381 aa24.6■■□□□ 1.53
IRF1-203ENST00000437654 LARP1Q6PKG0 1096 aaKnown RBP24.6■■□□□ 1.53
IRF1-203ENST00000437654 NRAPQ86VF7 1730 aa24.6■■□□□ 1.53
IRF1-203ENST00000437654 CRB1P82279 1406 aa24.6■■□□□ 1.53
IRF1-203ENST00000437654 MAP2P11137 1827 aaKnown RBP24.59■■□□□ 1.53
IRF1-203ENST00000437654 MTHFSP49914 203 aa24.59■■□□□ 1.53
IRF1-203ENST00000437654 CARD10Q9BWT7 1032 aa24.59■■□□□ 1.53
IRF1-203ENST00000437654 CCDC9Q9Y3X0 531 aaKnown RBP24.59■■□□□ 1.53
IRF1-203ENST00000437654 SPATA31A1Q5TZJ5 1347 aa24.59■■□□□ 1.53
IRF1-203ENST00000437654 TOM1L2Q6ZVM7 507 aa24.58■■□□□ 1.53
IRF1-203ENST00000437654 ONECUT3O60422 494 aaPredicted RBP24.57■■□□□ 1.52
IRF1-203ENST00000437654 CNGB1Q14028 1251 aaPredicted RBP24.57■■□□□ 1.52
IRF1-203ENST00000437654 PPP2R1AP30153 589 aa24.56■■□□□ 1.52
IRF1-203ENST00000437654 BARGINQ6ZT62 677 aa24.56■■□□□ 1.52
IRF1-203ENST00000437654 TCP11L2Q8N4U5 519 aa24.56■■□□□ 1.52
IRF1-203ENST00000437654 CDK12Q9NYV4 1490 aaPredicted RBP24.56■■□□□ 1.52
IRF1-203ENST00000437654 PRKRIP1Q9H875 184 aaPredicted RBP24.54■■□□□ 1.52
IRF1-203ENST00000437654 PEAK1Q9H792 1746 aa24.53■■□□□ 1.52
IRF1-203ENST00000437654 CFAP53Q96M91 514 aa24.53■■□□□ 1.52
IRF1-203ENST00000437654 CDCA7Q9BWT1 371 aaPredicted RBP24.53■■□□□ 1.52
IRF1-203ENST00000437654 NLRP2Q9NX02 1062 aa24.53■■□□□ 1.52
IRF1-203ENST00000437654 LTV1Q96GA3 475 aaPredicted RBP24.52■■□□□ 1.52
IRF1-203ENST00000437654 RGPD5Q99666 1765 aa24.52■■□□□ 1.52
IRF1-203ENST00000437654 EIF4A2Q14240 407 aaKnown RBP24.5■■□□□ 1.51
IRF1-203ENST00000437654 MYBBP1AQ9BQG0 1328 aaKnown RBP24.5■■□□□ 1.51
IRF1-203ENST00000437654 FAM208AQ9UK61 1670 aaKnown RBP24.49■■□□□ 1.51
IRF1-203ENST00000437654 ANP32CO43423 234 aa24.48■■□□□ 1.51
IRF1-203ENST00000437654 USP35Q9P2H5 1018 aa24.48■■□□□ 1.51
IRF1-203ENST00000437654 GLI3P10071 1580 aa24.47■■□□□ 1.51
IRF1-203ENST00000437654 DIAPH1O60610 1272 aaKnown RBP24.47■■□□□ 1.51
IRF1-203ENST00000437654 IL13P35225 146 aa24.47■■□□□ 1.51
IRF1-203ENST00000437654 NBPF6Q5VWK0 638 aa24.47■■□□□ 1.51
IRF1-203ENST00000437654 NBPF4Q96M43 638 aa24.47■■□□□ 1.51
IRF1-203ENST00000437654 FAM98CQ17RN3 349 aaKnown RBP24.46■■□□□ 1.51
IRF1-203ENST00000437654 EYA1Q99502 592 aa24.45■■□□□ 1.5
IRF1-203ENST00000437654 IL2RBP14784 551 aa24.43■■□□□ 1.5
IRF1-203ENST00000437654 SEPT12Q8IYM1 358 aa24.43■■□□□ 1.5
IRF1-203ENST00000437654 NUDCQ9Y266 331 aa24.43■■□□□ 1.5
IRF1-203ENST00000437654 IGSF1Q8N6C5 1336 aa24.42■■□□□ 1.5
IRF1-203ENST00000437654 NCAPD2Q15021 1401 aa24.42■■□□□ 1.5
IRF1-203ENST00000437654 PLEKHG2Q9H7P9 1386 aa24.42■■□□□ 1.5
IRF1-203ENST00000437654 DISP2A7MBM2 1401 aa24.39■■□□□ 1.5
IRF1-203ENST00000437654 RAPGEF4Q8WZA2 1011 aa24.39■■□□□ 1.49
IRF1-203ENST00000437654 COL3A1P02461 1466 aaPredicted RBP24.38■■□□□ 1.49
IRF1-203ENST00000437654 EXOC5O00471 708 aa24.38■■□□□ 1.49
IRF1-203ENST00000437654 RGS12O14924 1447 aa24.37■■□□□ 1.49
IRF1-203ENST00000437654 A0A0G2JS52 829 aa24.37■■□□□ 1.49
IRF1-203ENST00000437654 MYT1Q01538 1121 aa24.37■■□□□ 1.49
IRF1-203ENST00000437654 DDB1Q16531 1140 aa24.37■■□□□ 1.49
IRF1-203ENST00000437654 TATP17735 454 aaPredicted RBP24.36■■□□□ 1.49
IRF1-203ENST00000437654 THSD7AQ9UPZ6 1657 aa24.36■■□□□ 1.49
IRF1-203ENST00000437654 KDRP35968 1356 aa24.35■■□□□ 1.49
IRF1-203ENST00000437654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.35■■□□□ 1.49
IRF1-203ENST00000437654 PDE3BQ13370 1112 aa24.34■■□□□ 1.49
IRF1-203ENST00000437654 KRT27Q7Z3Y8 459 aa24.34■■□□□ 1.49
IRF1-203ENST00000437654 USHBP1Q8N6Y0 703 aa24.34■■□□□ 1.49
IRF1-203ENST00000437654 SULT6B1Q6IMI4 303 aa24.33■■□□□ 1.49
IRF1-203ENST00000437654 U2SURPO15042 1029 aaKnown RBP24.32■■□□□ 1.48
IRF1-203ENST00000437654 DIEXFQ68CQ4 756 aaKnown RBP24.31■■□□□ 1.48
IRF1-203ENST00000437654 ZCRB1Q8TBF4 217 aaKnown RBP24.31■■□□□ 1.48
IRF1-203ENST00000437654 PARP4Q9UKK3 1724 aaKnown RBP24.31■■□□□ 1.48
IRF1-203ENST00000437654 RGPD2P0DJD1 1756 aa24.31■■□□□ 1.48
IRF1-203ENST00000437654 RGPD1P0DJD0 1748 aa24.3■■□□□ 1.48
IRF1-203ENST00000437654 OVOS2A0A0G2JMS6 1433 aa24.3■■□□□ 1.48
IRF1-203ENST00000437654 FCHSD2O94868 740 aa24.3■■□□□ 1.48
IRF1-203ENST00000437654 AMOTQ4VCS5 1084 aa24.3■■□□□ 1.48
IRF1-203ENST00000437654 PNNQ9H307 717 aaKnown RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms