RNA–Protein interactions for RNA: ENST00000437413.2

SMG1P3-202, Transcript of SMG1 pseudogene 3, humanhuman

TSL 4

Gene SMG1P3, Length 589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-202ENST00000437413 KIF24Q5T7B8 1368 aa29.97■■■□□ 2.39
SMG1P3-202ENST00000437413 COL5A2P05997 1499 aaPredicted RBP29.95■■■□□ 2.39
SMG1P3-202ENST00000437413 RTL1A6NKG5 1358 aa29.95■■■□□ 2.39
SMG1P3-202ENST00000437413 ZBTB7CA1YPR0 619 aa29.95■■■□□ 2.39
SMG1P3-202ENST00000437413 RXRBP28702 533 aa29.95■■■□□ 2.39
SMG1P3-202ENST00000437413 BLMP54132 1417 aaPredicted RBP29.95■■■□□ 2.38
SMG1P3-202ENST00000437413 CDK12Q9NYV4 1490 aaPredicted RBP29.94■■■□□ 2.38
SMG1P3-202ENST00000437413 EVA1CP58658 441 aa29.94■■■□□ 2.38
SMG1P3-202ENST00000437413 GJD4Q96KN9 370 aaPredicted RBP29.94■■■□□ 2.38
SMG1P3-202ENST00000437413 MAP3K19Q56UN5 1328 aa29.93■■■□□ 2.38
SMG1P3-202ENST00000437413 IP6K1Q92551 441 aa29.91■■■□□ 2.38
SMG1P3-202ENST00000437413 MORC1Q86VD1 984 aa29.9■■■□□ 2.38
SMG1P3-202ENST00000437413 AXIN2Q9Y2T1 843 aa29.9■■■□□ 2.38
SMG1P3-202ENST00000437413 AMPHP49418 695 aa29.89■■■□□ 2.38
SMG1P3-202ENST00000437413 STRN4Q9NRL3 753 aa29.89■■■□□ 2.38
SMG1P3-202ENST00000437413 RGPD5Q99666 1765 aa29.89■■■□□ 2.38
SMG1P3-202ENST00000437413 CCDC9Q9Y3X0 531 aaKnown RBP29.88■■■□□ 2.37
SMG1P3-202ENST00000437413 SPATA31A5Q5VU36 1347 aa29.88■■■□□ 2.37
SMG1P3-202ENST00000437413 SPATA31A7Q8IWB4 1347 aa29.88■■■□□ 2.37
SMG1P3-202ENST00000437413 GLI3P10071 1580 aa29.87■■■□□ 2.37
SMG1P3-202ENST00000437413 WDR17Q8IZU2 1322 aa29.87■■■□□ 2.37
SMG1P3-202ENST00000437413 FLT4P35916 1363 aa29.87■■■□□ 2.37
SMG1P3-202ENST00000437413 CRB1P82279 1406 aa29.87■■■□□ 2.37
SMG1P3-202ENST00000437413 ZNF316A6NFI3 1004 aaPredicted RBP29.86■■■□□ 2.37
SMG1P3-202ENST00000437413 RRS1Q15050 365 aaKnown RBP29.86■■■□□ 2.37
SMG1P3-202ENST00000437413 MAP2P11137 1827 aaKnown RBP29.86■■■□□ 2.37
SMG1P3-202ENST00000437413 HOXC9P31274 260 aa29.85■■■□□ 2.37
SMG1P3-202ENST00000437413 FAM208AQ9UK61 1670 aaKnown RBP29.85■■■□□ 2.37
SMG1P3-202ENST00000437413 FBLN1P23142 703 aa29.84■■■□□ 2.37
SMG1P3-202ENST00000437413 THRAP3Q9Y2W1 955 aaKnown RBP29.84■■■□□ 2.37
SMG1P3-202ENST00000437413 ERBB3P21860 1342 aa29.84■■■□□ 2.37
SMG1P3-202ENST00000437413 SPATA31A1Q5TZJ5 1347 aa29.84■■■□□ 2.37
SMG1P3-202ENST00000437413 LARP1Q6PKG0 1096 aaKnown RBP29.83■■■□□ 2.37
SMG1P3-202ENST00000437413 INSRP06213 1382 aa29.82■■■□□ 2.36
SMG1P3-202ENST00000437413 SMG6Q86US8 1419 aaKnown RBP29.81■■■□□ 2.36
SMG1P3-202ENST00000437413 ONECUT3O60422 494 aaPredicted RBP29.81■■■□□ 2.36
SMG1P3-202ENST00000437413 CC2D1BQ5T0F9 858 aaKnown RBP29.81■■■□□ 2.36
SMG1P3-202ENST00000437413 POLKQ9UBT6 870 aa29.81■■■□□ 2.36
SMG1P3-202ENST00000437413 PEAK1Q9H792 1746 aa29.8■■■□□ 2.36
SMG1P3-202ENST00000437413 CSB-PGBD3P0DP91 1061 aa29.8■■■□□ 2.36
SMG1P3-202ENST00000437413 TOM1L2Q6ZVM7 507 aa29.8■■■□□ 2.36
SMG1P3-202ENST00000437413 ANKRD24Q8TF21 1146 aa29.8■■■□□ 2.36
SMG1P3-202ENST00000437413 DDX10Q13206 875 aaKnown RBP29.79■■■□□ 2.36
SMG1P3-202ENST00000437413 EMILIN1Q9Y6C2 1016 aa29.79■■■□□ 2.36
SMG1P3-202ENST00000437413 TNNT2P45379 298 aaPredicted RBP29.78■■■□□ 2.36
SMG1P3-202ENST00000437413 BARGINQ6ZT62 677 aa29.78■■■□□ 2.36
SMG1P3-202ENST00000437413 TCP11L2Q8N4U5 519 aa29.78■■■□□ 2.36
SMG1P3-202ENST00000437413 CARD10Q9BWT7 1032 aa29.78■■■□□ 2.36
SMG1P3-202ENST00000437413 RGS12O14924 1447 aa29.77■■■□□ 2.36
SMG1P3-202ENST00000437413 PPM1GO15355 546 aaPredicted RBP29.73■■■□□ 2.35
SMG1P3-202ENST00000437413 THSD7AQ9UPZ6 1657 aa29.72■■■□□ 2.35
SMG1P3-202ENST00000437413 FAM98CQ17RN3 349 aaKnown RBP29.72■■■□□ 2.35
SMG1P3-202ENST00000437413 HSP90AB2PQ58FF8 381 aa29.72■■■□□ 2.35
SMG1P3-202ENST00000437413 CDCA7Q9BWT1 371 aaPredicted RBP29.72■■■□□ 2.35
SMG1P3-202ENST00000437413 USP35Q9P2H5 1018 aa29.72■■■□□ 2.35
SMG1P3-202ENST00000437413 NLRP2Q9NX02 1062 aa29.7■■■□□ 2.35
SMG1P3-202ENST00000437413 WNK3Q9BYP7 1800 aa29.69■■■□□ 2.34
SMG1P3-202ENST00000437413 SEPT12Q8IYM1 358 aa29.69■■■□□ 2.34
SMG1P3-202ENST00000437413 LTV1Q96GA3 475 aaPredicted RBP29.68■■■□□ 2.34
SMG1P3-202ENST00000437413 PARP4Q9UKK3 1724 aaKnown RBP29.66■■■□□ 2.34
SMG1P3-202ENST00000437413 PARD3Q8TEW0 1356 aa29.65■■■□□ 2.34
SMG1P3-202ENST00000437413 A0A0G2JS52 829 aa29.65■■■□□ 2.34
SMG1P3-202ENST00000437413 MYT1Q01538 1121 aa29.65■■■□□ 2.34
SMG1P3-202ENST00000437413 MTHFSP49914 203 aa29.64■■■□□ 2.34
SMG1P3-202ENST00000437413 DISP2A7MBM2 1401 aa29.63■■■□□ 2.33
SMG1P3-202ENST00000437413 RALBP1Q15311 655 aa29.63■■■□□ 2.33
SMG1P3-202ENST00000437413 CNGB1Q14028 1251 aaPredicted RBP29.62■■■□□ 2.33
SMG1P3-202ENST00000437413 RGPD2P0DJD1 1756 aa29.61■■■□□ 2.33
SMG1P3-202ENST00000437413 BRWD3Q6RI45 1802 aa29.61■■■□□ 2.33
SMG1P3-202ENST00000437413 IL2RBP14784 551 aa29.6■■■□□ 2.33
SMG1P3-202ENST00000437413 EIF4A2Q14240 407 aaKnown RBP29.6■■■□□ 2.33
SMG1P3-202ENST00000437413 NCAPD2Q15021 1401 aa29.6■■■□□ 2.33
SMG1P3-202ENST00000437413 NBPF6Q5VWK0 638 aa29.59■■■□□ 2.33
SMG1P3-202ENST00000437413 KRT27Q7Z3Y8 459 aa29.59■■■□□ 2.33
SMG1P3-202ENST00000437413 NBPF4Q96M43 638 aa29.59■■■□□ 2.33
SMG1P3-202ENST00000437413 PPP2R1AP30153 589 aa29.58■■■□□ 2.33
SMG1P3-202ENST00000437413 LRRC37A3O60309 1634 aa29.56■■■□□ 2.32
SMG1P3-202ENST00000437413 DDB1Q16531 1140 aa29.56■■■□□ 2.32
SMG1P3-202ENST00000437413 CFAP53Q96M91 514 aa29.56■■■□□ 2.32
SMG1P3-202ENST00000437413 PLEKHG2Q9H7P9 1386 aa29.55■■■□□ 2.32
SMG1P3-202ENST00000437413 PDE3BQ13370 1112 aa29.54■■■□□ 2.32
SMG1P3-202ENST00000437413 EYA1Q99502 592 aa29.54■■■□□ 2.32
SMG1P3-202ENST00000437413 IGSF1Q8N6C5 1336 aa29.53■■■□□ 2.32
SMG1P3-202ENST00000437413 EXOC5O00471 708 aa29.53■■■□□ 2.32
SMG1P3-202ENST00000437413 TNS2Q63HR2 1409 aa29.53■■■□□ 2.32
SMG1P3-202ENST00000437413 DIAPH1O60610 1272 aaKnown RBP29.52■■■□□ 2.32
SMG1P3-202ENST00000437413 IL13P35225 146 aa29.52■■■□□ 2.32
SMG1P3-202ENST00000437413 RAPGEF4Q8WZA2 1011 aa29.52■■■□□ 2.32
SMG1P3-202ENST00000437413 COL3A1P02461 1466 aaPredicted RBP29.51■■■□□ 2.31
SMG1P3-202ENST00000437413 RGPD1P0DJD0 1748 aa29.51■■■□□ 2.31
SMG1P3-202ENST00000437413 OVOS2A0A0G2JMS6 1433 aa29.49■■■□□ 2.31
SMG1P3-202ENST00000437413 MYBBP1AQ9BQG0 1328 aaKnown RBP29.48■■■□□ 2.31
SMG1P3-202ENST00000437413 TATP17735 454 aaPredicted RBP29.48■■■□□ 2.31
SMG1P3-202ENST00000437413 USHBP1Q8N6Y0 703 aa29.48■■■□□ 2.31
SMG1P3-202ENST00000437413 MEGF6O75095 1541 aa29.47■■■□□ 2.31
SMG1P3-202ENST00000437413 PRKRIP1Q9H875 184 aaPredicted RBP29.47■■■□□ 2.31
SMG1P3-202ENST00000437413 KDRP35968 1356 aa29.45■■■□□ 2.31
SMG1P3-202ENST00000437413 FAM196AQ6ZSG2 479 aa29.45■■■□□ 2.31
SMG1P3-202ENST00000437413 NUDCQ9Y266 331 aa29.44■■■□□ 2.3
SMG1P3-202ENST00000437413 BCL9O00512 1426 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms