RNA–Protein interactions for RNA: ENST00000437113.2

LINC01039-201, Transcript of long intergenic non-protein coding RNA 1039, humanhuman

TSL 5 BASIC

Gene LINC01039, Length 650 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01039-201ENST00000437113 NRAPQ86VF7 1730 aa14.11□□□□□ -0.15
LINC01039-201ENST00000437113 ARHGEF25Q86VW2 580 aa14.11□□□□□ -0.15
LINC01039-201ENST00000437113 UNC5CLQ8IV45 518 aa14.11□□□□□ -0.15
LINC01039-201ENST00000437113 TRPC5Q9UL62 973 aaPredicted RBP14.11□□□□□ -0.15
LINC01039-201ENST00000437113 COL18A1P39060 1754 aa14.11□□□□□ -0.15
LINC01039-201ENST00000437113 BCL9LQ86UU0 1499 aa14.11□□□□□ -0.15
LINC01039-201ENST00000437113 BTG4Q9NY30 223 aa14.1□□□□□ -0.15
LINC01039-201ENST00000437113 SOX12O15370 315 aa14.09□□□□□ -0.15
LINC01039-201ENST00000437113 CHRNA2Q15822 529 aa14.09□□□□□ -0.15
LINC01039-201ENST00000437113 QTRT2Q9H974 415 aaKnown RBP14.09□□□□□ -0.15
LINC01039-201ENST00000437113 RGPD5Q99666 1765 aa14.09□□□□□ -0.15
LINC01039-201ENST00000437113 KIF24Q5T7B8 1368 aa14.08□□□□□ -0.16
LINC01039-201ENST00000437113 CAMTA1Q9Y6Y1 1673 aa14.07□□□□□ -0.16
LINC01039-201ENST00000437113 ATRNO75882 1429 aa14.07□□□□□ -0.16
LINC01039-201ENST00000437113 EVA1CP58658 441 aa14.07□□□□□ -0.16
LINC01039-201ENST00000437113 VPS72Q15906 364 aa14.07□□□□□ -0.16
LINC01039-201ENST00000437113 CFAP53Q96M91 514 aa14.07□□□□□ -0.16
LINC01039-201ENST00000437113 ZBTB7CA1YPR0 619 aa14.06□□□□□ -0.16
LINC01039-201ENST00000437113 RXRBP28702 533 aa14.06□□□□□ -0.16
LINC01039-201ENST00000437113 RBM6P78332 1123 aaKnown RBP14.06□□□□□ -0.16
LINC01039-201ENST00000437113 POTEAQ6S8J7 498 aa14.06□□□□□ -0.16
LINC01039-201ENST00000437113 BLMP54132 1417 aaPredicted RBP14.06□□□□□ -0.16
LINC01039-201ENST00000437113 PPM1GO15355 546 aaPredicted RBP14.05□□□□□ -0.16
LINC01039-201ENST00000437113 GJD4Q96KN9 370 aaPredicted RBP14.05□□□□□ -0.16
LINC01039-201ENST00000437113 RTL1A6NKG5 1358 aa14.05□□□□□ -0.16
LINC01039-201ENST00000437113 COL5A2P05997 1499 aaPredicted RBP14.05□□□□□ -0.16
LINC01039-201ENST00000437113 AMPHP49418 695 aa14.04□□□□□ -0.16
LINC01039-201ENST00000437113 MTHFSP49914 203 aa14.04□□□□□ -0.16
LINC01039-201ENST00000437113 CCDC184Q52MB2 194 aa14.04□□□□□ -0.16
LINC01039-201ENST00000437113 IP6K1Q92551 441 aa14.04□□□□□ -0.16
LINC01039-201ENST00000437113 MAP3K19Q56UN5 1328 aa14.04□□□□□ -0.16
LINC01039-201ENST00000437113 SMG6Q86US8 1419 aaKnown RBP14.04□□□□□ -0.16
LINC01039-201ENST00000437113 CDK12Q9NYV4 1490 aaPredicted RBP14.04□□□□□ -0.16
LINC01039-201ENST00000437113 FAM208AQ9UK61 1670 aaKnown RBP14.04□□□□□ -0.16
LINC01039-201ENST00000437113 RRS1Q15050 365 aaKnown RBP14.03□□□□□ -0.16
LINC01039-201ENST00000437113 STRN4Q9NRL3 753 aa14.03□□□□□ -0.16
LINC01039-201ENST00000437113 PEAK1Q9H792 1746 aa14.03□□□□□ -0.16
LINC01039-201ENST00000437113 FLT4P35916 1363 aa14.02□□□□□ -0.17
LINC01039-201ENST00000437113 WDR43Q15061 677 aaKnown RBP eCLIP14.02□□□□□ -0.17
LINC01039-201ENST00000437113 FAM9BQ8IZU0 186 aa14.02□□□□□ -0.17
LINC01039-201ENST00000437113 AXIN2Q9Y2T1 843 aa14.02□□□□□ -0.17
LINC01039-201ENST00000437113 CCDC9Q9Y3X0 531 aaKnown RBP14.02□□□□□ -0.17
LINC01039-201ENST00000437113 EMILIN1Q9Y6C2 1016 aa14.02□□□□□ -0.17
LINC01039-201ENST00000437113 GLI3P10071 1580 aa14.01□□□□□ -0.17
LINC01039-201ENST00000437113 CRB1P82279 1406 aa14.01□□□□□ -0.17
LINC01039-201ENST00000437113 SPATA31A5Q5VU36 1347 aa14.01□□□□□ -0.17
LINC01039-201ENST00000437113 SPATA31A7Q8IWB4 1347 aa14.01□□□□□ -0.17
LINC01039-201ENST00000437113 WDR17Q8IZU2 1322 aa14.01□□□□□ -0.17
LINC01039-201ENST00000437113 FBLN1P23142 703 aa14.01□□□□□ -0.17
LINC01039-201ENST00000437113 HOXC9P31274 260 aa14.01□□□□□ -0.17
LINC01039-201ENST00000437113 POLKQ9UBT6 870 aa14.01□□□□□ -0.17
LINC01039-201ENST00000437113 ERBB3P21860 1342 aa14□□□□□ -0.17
LINC01039-201ENST00000437113 SPATA31A1Q5TZJ5 1347 aa14□□□□□ -0.17
LINC01039-201ENST00000437113 THRAP3Q9Y2W1 955 aaKnown RBP14□□□□□ -0.17
LINC01039-201ENST00000437113 INSRP06213 1382 aa13.99□□□□□ -0.17
LINC01039-201ENST00000437113 ONECUT3O60422 494 aaPredicted RBP13.99□□□□□ -0.17
LINC01039-201ENST00000437113 CSB-PGBD3P0DP91 1061 aa13.99□□□□□ -0.17
LINC01039-201ENST00000437113 LARP1Q6PKG0 1096 aaKnown RBP13.99□□□□□ -0.17
LINC01039-201ENST00000437113 TOM1L2Q6ZVM7 507 aa13.99□□□□□ -0.17
LINC01039-201ENST00000437113 COL3A1P02461 1466 aaPredicted RBP13.99□□□□□ -0.17
LINC01039-201ENST00000437113 ANKRD24Q8TF21 1146 aa13.98□□□□□ -0.17
LINC01039-201ENST00000437113 YTHDC1Q96MU7 727 aaKnown RBP13.98□□□□□ -0.17
LINC01039-201ENST00000437113 CARD10Q9BWT7 1032 aa13.98□□□□□ -0.17
LINC01039-201ENST00000437113 NUDCQ9Y266 331 aa13.98□□□□□ -0.17
LINC01039-201ENST00000437113 DIAPH1O60610 1272 aaKnown RBP13.97□□□□□ -0.17
LINC01039-201ENST00000437113 BARGINQ6ZT62 677 aa13.97□□□□□ -0.17
LINC01039-201ENST00000437113 TCP11L2Q8N4U5 519 aa13.97□□□□□ -0.17
LINC01039-201ENST00000437113 PNISRQ8TF01 805 aaKnown RBP13.96□□□□□ -0.17
LINC01039-201ENST00000437113 CDCA7Q9BWT1 371 aaPredicted RBP13.96□□□□□ -0.17
LINC01039-201ENST00000437113 WNK3Q9BYP7 1800 aa13.96□□□□□ -0.17
LINC01039-201ENST00000437113 U2SURPO15042 1029 aaKnown RBP13.95□□□□□ -0.18
LINC01039-201ENST00000437113 HSP90AB2PQ58FF8 381 aa13.95□□□□□ -0.18
LINC01039-201ENST00000437113 NLRP2Q9NX02 1062 aa13.95□□□□□ -0.18
LINC01039-201ENST00000437113 USP35Q9P2H5 1018 aa13.95□□□□□ -0.18
LINC01039-201ENST00000437113 RGPD2P0DJD1 1756 aa13.95□□□□□ -0.18
LINC01039-201ENST00000437113 RGS12O14924 1447 aa13.94□□□□□ -0.18
LINC01039-201ENST00000437113 FAM98CQ17RN3 349 aaKnown RBP13.94□□□□□ -0.18
LINC01039-201ENST00000437113 LTV1Q96GA3 475 aaPredicted RBP13.94□□□□□ -0.18
LINC01039-201ENST00000437113 BRWD3Q6RI45 1802 aa13.94□□□□□ -0.18
LINC01039-201ENST00000437113 THSD7AQ9UPZ6 1657 aa13.94□□□□□ -0.18
LINC01039-201ENST00000437113 PARP4Q9UKK3 1724 aaKnown RBP13.93□□□□□ -0.18
LINC01039-201ENST00000437113 U2AF1L5P0DN76 240 aaPredicted RBP13.93□□□□□ -0.18
LINC01039-201ENST00000437113 U2AF1Q01081 240 aaKnown RBP eCLIP13.93□□□□□ -0.18
LINC01039-201ENST00000437113 ILDR2Q71H61 639 aa13.93□□□□□ -0.18
LINC01039-201ENST00000437113 SEPT12Q8IYM1 358 aa13.93□□□□□ -0.18
LINC01039-201ENST00000437113 RGPD1P0DJD0 1748 aa13.92□□□□□ -0.18
LINC01039-201ENST00000437113 A0A0G2JS52 829 aa13.91□□□□□ -0.18
LINC01039-201ENST00000437113 MYT1Q01538 1121 aa13.91□□□□□ -0.18
LINC01039-201ENST00000437113 EIF4A2Q14240 407 aaKnown RBP13.91□□□□□ -0.18
LINC01039-201ENST00000437113 ADAMTS8Q9UP79 889 aa13.91□□□□□ -0.18
LINC01039-201ENST00000437113 NEFMP07197 916 aa13.89□□□□□ -0.19
LINC01039-201ENST00000437113 IL2RBP14784 551 aa13.89□□□□□ -0.19
LINC01039-201ENST00000437113 IL13P35225 146 aa13.89□□□□□ -0.19
LINC01039-201ENST00000437113 HNRNPUQ00839 825 aaKnown RBP eCLIP13.89□□□□□ -0.19
LINC01039-201ENST00000437113 NBPF6Q5VWK0 638 aa13.89□□□□□ -0.19
LINC01039-201ENST00000437113 NBPF4Q96M43 638 aa13.89□□□□□ -0.19
LINC01039-201ENST00000437113 PNNQ9H307 717 aaKnown RBP13.89□□□□□ -0.19
LINC01039-201ENST00000437113 DISP2A7MBM2 1401 aa13.89□□□□□ -0.19
LINC01039-201ENST00000437113 KRT27Q7Z3Y8 459 aa13.88□□□□□ -0.19
LINC01039-201ENST00000437113 NCAPD2Q15021 1401 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms