RNA–Protein interactions for RNA: ENST00000436754.5

PDLIM2-211, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-211ENST00000436754 TOM1L2Q6ZVM7 507 aa15.52■□□□□ 0.08
PDLIM2-211ENST00000436754 CCER1Q8TC90 406 aaPredicted RBP15.52■□□□□ 0.08
PDLIM2-211ENST00000436754 PIK3C2AO00443 1686 aa15.51■□□□□ 0.07
PDLIM2-211ENST00000436754 PLSCR1O15162 318 aa15.51■□□□□ 0.07
PDLIM2-211ENST00000436754 DDB1Q16531 1140 aa15.51■□□□□ 0.07
PDLIM2-211ENST00000436754 RREB1Q92766 1687 aa15.5■□□□□ 0.07
PDLIM2-211ENST00000436754 OVOS2A0A0G2JMS6 1433 aa15.5■□□□□ 0.07
PDLIM2-211ENST00000436754 OVOS2A0A0J9YW53 1432 aa15.5■□□□□ 0.07
PDLIM2-211ENST00000436754 BCL9O00512 1426 aa15.5■□□□□ 0.07
PDLIM2-211ENST00000436754 OVOS2Q6IE36 1432 aa15.5■□□□□ 0.07
PDLIM2-211ENST00000436754 ZBTB7CA1YPR0 619 aa15.49■□□□□ 0.07
PDLIM2-211ENST00000436754 CARD10Q9BWT7 1032 aa15.49■□□□□ 0.07
PDLIM2-211ENST00000436754 AKAP12Q02952 1782 aa15.49■□□□□ 0.07
PDLIM2-211ENST00000436754 PEAK1Q9H792 1746 aa15.48■□□□□ 0.07
PDLIM2-211ENST00000436754 BCL11BQ9C0K0 894 aaPredicted RBP15.48■□□□□ 0.07
PDLIM2-211ENST00000436754 KTN1Q86UP2 1357 aaKnown RBP15.48■□□□□ 0.07
PDLIM2-211ENST00000436754 PUS7Q96PZ0 661 aaKnown RBP15.47■□□□□ 0.07
PDLIM2-211ENST00000436754 TIMELESSQ9UNS1 1208 aa15.47■□□□□ 0.07
PDLIM2-211ENST00000436754 USP31Q70CQ4 1352 aa15.47■□□□□ 0.07
PDLIM2-211ENST00000436754 NUP188Q5SRE5 1749 aa15.46■□□□□ 0.07
PDLIM2-211ENST00000436754 ST20-MTHFSA0A0A6YYL1 179 aa15.46■□□□□ 0.07
PDLIM2-211ENST00000436754 MARCH10Q8NA82 808 aaPredicted RBP15.46■□□□□ 0.07
PDLIM2-211ENST00000436754 USP47Q96K76 1375 aa15.46■□□□□ 0.07
PDLIM2-211ENST00000436754 ABCC6O95255 1503 aa15.45■□□□□ 0.06
PDLIM2-211ENST00000436754 LRRC37A3O60309 1634 aa15.45■□□□□ 0.06
PDLIM2-211ENST00000436754 RGPD3A6NKT7 1758 aaPredicted RBP15.44■□□□□ 0.06
PDLIM2-211ENST00000436754 RGPD4Q7Z3J3 1758 aa15.44■□□□□ 0.06
PDLIM2-211ENST00000436754 NFAT5O94916 1531 aa15.44■□□□□ 0.06
PDLIM2-211ENST00000436754 EXOC5O00471 708 aa15.44■□□□□ 0.06
PDLIM2-211ENST00000436754 TMC1Q8TDI8 760 aa15.44■□□□□ 0.06
PDLIM2-211ENST00000436754 SBF2Q86WG5 1849 aa15.44■□□□□ 0.06
PDLIM2-211ENST00000436754 MON2Q7Z3U7 1717 aa15.43■□□□□ 0.06
PDLIM2-211ENST00000436754 CSB-PGBD3P0DP91 1061 aa15.43■□□□□ 0.06
PDLIM2-211ENST00000436754 CCDC7Q96M83 1385 aa15.43■□□□□ 0.06
PDLIM2-211ENST00000436754 RGPD5Q99666 1765 aa15.42■□□□□ 0.06
PDLIM2-211ENST00000436754 CD163L1Q9NR16 1453 aa15.42■□□□□ 0.06
PDLIM2-211ENST00000436754 TESK2Q96S53 571 aa15.42■□□□□ 0.06
PDLIM2-211ENST00000436754 SPON1Q9HCB6 807 aa15.42■□□□□ 0.06
PDLIM2-211ENST00000436754 WNK3Q9BYP7 1800 aa15.41■□□□□ 0.06
PDLIM2-211ENST00000436754 SOX12O15370 315 aa15.41■□□□□ 0.06
PDLIM2-211ENST00000436754 KCNQ2O43526 872 aa15.41■□□□□ 0.06
PDLIM2-211ENST00000436754 HDGFL2Q7Z4V5 671 aaPredicted RBP15.41■□□□□ 0.06
PDLIM2-211ENST00000436754 PROM2Q8N271 834 aa15.41■□□□□ 0.06
PDLIM2-211ENST00000436754 USP54Q70EL1 1684 aa15.41■□□□□ 0.06
PDLIM2-211ENST00000436754 SLC24A1O60721 1099 aa15.4■□□□□ 0.06
PDLIM2-211ENST00000436754 PTF1AQ7RTS3 328 aa15.4■□□□□ 0.06
PDLIM2-211ENST00000436754 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.4■□□□□ 0.06
PDLIM2-211ENST00000436754 SLC12A5Q9H2X9 1139 aa15.4■□□□□ 0.06
PDLIM2-211ENST00000436754 NME9Q86XW9 330 aa15.39■□□□□ 0.05
PDLIM2-211ENST00000436754 TERF2IPQ9NYB0 399 aa15.39■□□□□ 0.05
PDLIM2-211ENST00000436754 ERBB3P21860 1342 aa15.39■□□□□ 0.05
PDLIM2-211ENST00000436754 EDC4Q6P2E9 1401 aaKnown RBP15.38■□□□□ 0.05
PDLIM2-211ENST00000436754 TMF1P82094 1093 aa15.37■□□□□ 0.05
PDLIM2-211ENST00000436754 NINLQ9Y2I6 1382 aa15.36■□□□□ 0.05
PDLIM2-211ENST00000436754 A0A1W2PP64 1363 aa15.36■□□□□ 0.05
PDLIM2-211ENST00000436754 TNS2Q63HR2 1409 aa15.35■□□□□ 0.05
PDLIM2-211ENST00000436754 IL2RBP14784 551 aa15.35■□□□□ 0.05
PDLIM2-211ENST00000436754 TXNRD1Q16881 649 aa15.35■□□□□ 0.05
PDLIM2-211ENST00000436754 ANO8Q9HCE9 1232 aaPredicted RBP15.35■□□□□ 0.05
PDLIM2-211ENST00000436754 NLRP2Q9NX02 1062 aa15.35■□□□□ 0.05
PDLIM2-211ENST00000436754 ANKRD24Q8TF21 1146 aa15.34■□□□□ 0.05
PDLIM2-211ENST00000436754 PPP1R1BQ9UD71 204 aaPredicted RBP15.34■□□□□ 0.05
PDLIM2-211ENST00000436754 SLC15A2Q16348 729 aa15.33■□□□□ 0.04
PDLIM2-211ENST00000436754 IP6K1Q92551 441 aa15.33■□□□□ 0.04
PDLIM2-211ENST00000436754 CDCA8Q53HL2 280 aa15.32■□□□□ 0.04
PDLIM2-211ENST00000436754 STK32BQ9NY57 414 aa15.32■□□□□ 0.04
PDLIM2-211ENST00000436754 LTN1O94822 1766 aa15.31■□□□□ 0.04
PDLIM2-211ENST00000436754 CASZ1Q86V15 1759 aa15.31■□□□□ 0.04
PDLIM2-211ENST00000436754 DCAF8L1A6NGE4 600 aa15.3■□□□□ 0.04
PDLIM2-211ENST00000436754 ANKRD36BQ8N2N9 1353 aa15.3■□□□□ 0.04
PDLIM2-211ENST00000436754 PDGFDQ9GZP0 370 aaPredicted RBP15.3■□□□□ 0.04
PDLIM2-211ENST00000436754 NHSQ6T4R5 1651 aa15.29■□□□□ 0.04
PDLIM2-211ENST00000436754 PTGER2P43116 358 aa15.29■□□□□ 0.04
PDLIM2-211ENST00000436754 EIF4G2P78344 907 aaKnown RBP eCLIP15.28■□□□□ 0.04
PDLIM2-211ENST00000436754 ACSBG1Q96GR2 724 aa15.28■□□□□ 0.04
PDLIM2-211ENST00000436754 COG3Q96JB2 828 aa15.28■□□□□ 0.04
PDLIM2-211ENST00000436754 MYOM1P52179 1685 aa15.28■□□□□ 0.04
PDLIM2-211ENST00000436754 ZBTB7AO95365 584 aa15.27■□□□□ 0.04
PDLIM2-211ENST00000436754 MTFR1LQ9H019 292 aa15.27■□□□□ 0.04
PDLIM2-211ENST00000436754 YY1P25490 414 aa15.26■□□□□ 0.03
PDLIM2-211ENST00000436754 POLR3GLQ9BT43 218 aa15.26■□□□□ 0.03
PDLIM2-211ENST00000436754 MAP3K19Q56UN5 1328 aa15.25■□□□□ 0.03
PDLIM2-211ENST00000436754 HSPA5P11021 654 aaKnown RBP15.25■□□□□ 0.03
PDLIM2-211ENST00000436754 HOXC9P31274 260 aa15.25■□□□□ 0.03
PDLIM2-211ENST00000436754 SLC27A3Q5K4L6 730 aa15.25■□□□□ 0.03
PDLIM2-211ENST00000436754 SGIP1Q9BQI5 828 aa15.25■□□□□ 0.03
PDLIM2-211ENST00000436754 FAM208AQ9UK61 1670 aaKnown RBP15.25■□□□□ 0.03
PDLIM2-211ENST00000436754 KIF20BQ96Q89 1820 aa15.24■□□□□ 0.03
PDLIM2-211ENST00000436754 AMPHP49418 695 aa15.24■□□□□ 0.03
PDLIM2-211ENST00000436754 ATF5Q9Y2D1 282 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-211ENST00000436754 FYB1O15117 783 aa15.23■□□□□ 0.03
PDLIM2-211ENST00000436754 DDX54Q8TDD1 881 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-211ENST00000436754 LTV1Q96GA3 475 aaPredicted RBP15.23■□□□□ 0.03
PDLIM2-211ENST00000436754 LRRC4BQ9NT99 713 aa15.23■□□□□ 0.03
PDLIM2-211ENST00000436754 BTAF1O14981 1849 aa15.22■□□□□ 0.03
PDLIM2-211ENST00000436754 PAPPAQ13219 1627 aa15.22■□□□□ 0.03
PDLIM2-211ENST00000436754 SYT17Q9BSW7 474 aa15.22■□□□□ 0.03
PDLIM2-211ENST00000436754 CGNL1Q0VF96 1302 aa15.21■□□□□ 0.03
PDLIM2-211ENST00000436754 FBLN1P23142 703 aa15.21■□□□□ 0.03
PDLIM2-211ENST00000436754 ZCRB1Q8TBF4 217 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms