RNA–Protein interactions for RNA: ENST00000436679.2

C2CD3-206, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 1,134 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-206ENST00000436679 CGNL1Q0VF96 1302 aa21.7■■□□□ 1.06
C2CD3-206ENST00000436679 COL14A1Q05707 1796 aaKnown RBP21.69■■□□□ 1.06
C2CD3-206ENST00000436679 COG3Q96JB2 828 aa21.69■■□□□ 1.06
C2CD3-206ENST00000436679 ZC3H6P61129 1189 aaKnown RBP21.68■■□□□ 1.06
C2CD3-206ENST00000436679 SPATA31A5Q5VU36 1347 aa21.68■■□□□ 1.06
C2CD3-206ENST00000436679 SPATA31A7Q8IWB4 1347 aa21.68■■□□□ 1.06
C2CD3-206ENST00000436679 NRAPQ86VF7 1730 aa21.68■■□□□ 1.06
C2CD3-206ENST00000436679 STRN4Q9NRL3 753 aa21.67■■□□□ 1.06
C2CD3-206ENST00000436679 KIF20BQ96Q89 1820 aa21.66■■□□□ 1.06
C2CD3-206ENST00000436679 GGNBP2Q9H3C7 697 aa21.66■■□□□ 1.06
C2CD3-206ENST00000436679 NSD2O96028 1365 aa21.65■■□□□ 1.06
C2CD3-206ENST00000436679 AATKQ6ZMQ8 1374 aa21.65■■□□□ 1.06
C2CD3-206ENST00000436679 ARHGEF25Q86VW2 580 aa21.65■■□□□ 1.06
C2CD3-206ENST00000436679 KNSTRNQ9Y448 316 aa21.64■■□□□ 1.05
C2CD3-206ENST00000436679 ABCC6O95255 1503 aa21.64■■□□□ 1.05
C2CD3-206ENST00000436679 LMO7Q8WWI1 1683 aa21.63■■□□□ 1.05
C2CD3-206ENST00000436679 PER1O15534 1290 aaPredicted RBP21.63■■□□□ 1.05
C2CD3-206ENST00000436679 SOX12O15370 315 aa21.62■■□□□ 1.05
C2CD3-206ENST00000436679 BAG6P46379 1132 aa21.62■■□□□ 1.05
C2CD3-206ENST00000436679 EN1Q05925 392 aaPredicted RBP21.61■■□□□ 1.05
C2CD3-206ENST00000436679 USP35Q9P2H5 1018 aa21.61■■□□□ 1.05
C2CD3-206ENST00000436679 SPATA31A1Q5TZJ5 1347 aa21.6■■□□□ 1.05
C2CD3-206ENST00000436679 PSDA5PKW4 1024 aaPredicted RBP21.6■■□□□ 1.05
C2CD3-206ENST00000436679 EVA1CP58658 441 aa21.6■■□□□ 1.05
C2CD3-206ENST00000436679 AMER1Q5JTC6 1135 aaPredicted RBP21.6■■□□□ 1.05
C2CD3-206ENST00000436679 CAMTA1Q9Y6Y1 1673 aa21.6■■□□□ 1.05
C2CD3-206ENST00000436679 NPC1L1Q9UHC9 1359 aa21.59■■□□□ 1.05
C2CD3-206ENST00000436679 COL18A1P39060 1754 aa21.59■■□□□ 1.05
C2CD3-206ENST00000436679 ANKRD26Q9UPS8 1709 aa21.58■■□□□ 1.04
C2CD3-206ENST00000436679 COL5A2P05997 1499 aaPredicted RBP21.57■■□□□ 1.04
C2CD3-206ENST00000436679 ZBTB7CA1YPR0 619 aa21.56■■□□□ 1.04
C2CD3-206ENST00000436679 MAP3K19Q56UN5 1328 aa21.55■■□□□ 1.04
C2CD3-206ENST00000436679 LARP1Q6PKG0 1096 aaKnown RBP21.55■■□□□ 1.04
C2CD3-206ENST00000436679 AXIN2Q9Y2T1 843 aa21.55■■□□□ 1.04
C2CD3-206ENST00000436679 RTL1A6NKG5 1358 aa21.55■■□□□ 1.04
C2CD3-206ENST00000436679 KIF24Q5T7B8 1368 aa21.54■■□□□ 1.04
C2CD3-206ENST00000436679 TRIM37O94972 964 aa21.53■■□□□ 1.04
C2CD3-206ENST00000436679 FBLN1P23142 703 aa21.53■■□□□ 1.04
C2CD3-206ENST00000436679 IP6K1Q92551 441 aa21.53■■□□□ 1.04
C2CD3-206ENST00000436679 LTN1O94822 1766 aa21.53■■□□□ 1.04
C2CD3-206ENST00000436679 THSD7AQ9UPZ6 1657 aa21.53■■□□□ 1.04
C2CD3-206ENST00000436679 RRS1Q15050 365 aaKnown RBP21.52■■□□□ 1.04
C2CD3-206ENST00000436679 EZH2Q15910 746 aaKnown RBP21.52■■□□□ 1.04
C2CD3-206ENST00000436679 DISP2A7MBM2 1401 aa21.52■■□□□ 1.04
C2CD3-206ENST00000436679 MORC1Q86VD1 984 aa21.51■■□□□ 1.03
C2CD3-206ENST00000436679 HOXC9P31274 260 aa21.5■■□□□ 1.03
C2CD3-206ENST00000436679 FAM196AQ6ZSG2 479 aa21.5■■□□□ 1.03
C2CD3-206ENST00000436679 WDR17Q8IZU2 1322 aa21.5■■□□□ 1.03
C2CD3-206ENST00000436679 LRP5O75197 1615 aa21.49■■□□□ 1.03
C2CD3-206ENST00000436679 AMPHP49418 695 aa21.49■■□□□ 1.03
C2CD3-206ENST00000436679 PDE3BQ13370 1112 aa21.49■■□□□ 1.03
C2CD3-206ENST00000436679 R3HDM1Q15032 1099 aaKnown RBP21.49■■□□□ 1.03
C2CD3-206ENST00000436679 ERBB3P21860 1342 aa21.49■■□□□ 1.03
C2CD3-206ENST00000436679 CRB1P82279 1406 aa21.48■■□□□ 1.03
C2CD3-206ENST00000436679 ZNF316A6NFI3 1004 aaPredicted RBP21.48■■□□□ 1.03
C2CD3-206ENST00000436679 BARGINQ6ZT62 677 aa21.48■■□□□ 1.03
C2CD3-206ENST00000436679 TCP11L2Q8N4U5 519 aa21.48■■□□□ 1.03
C2CD3-206ENST00000436679 FLT4P35916 1363 aa21.48■■□□□ 1.03
C2CD3-206ENST00000436679 SMG6Q86US8 1419 aaKnown RBP21.47■■□□□ 1.03
C2CD3-206ENST00000436679 APBA3O96018 575 aa21.47■■□□□ 1.03
C2CD3-206ENST00000436679 CC2D1BQ5T0F9 858 aaKnown RBP21.47■■□□□ 1.03
C2CD3-206ENST00000436679 POLKQ9UBT6 870 aa21.47■■□□□ 1.03
C2CD3-206ENST00000436679 EMILIN1Q9Y6C2 1016 aa21.47■■□□□ 1.03
C2CD3-206ENST00000436679 RGPD1P0DJD0 1748 aa21.46■■□□□ 1.03
C2CD3-206ENST00000436679 INSRP06213 1382 aa21.46■■□□□ 1.03
C2CD3-206ENST00000436679 PEAK1Q9H792 1746 aa21.46■■□□□ 1.03
C2CD3-206ENST00000436679 TNNT2P45379 298 aaPredicted RBP21.45■■□□□ 1.02
C2CD3-206ENST00000436679 DDX10Q13206 875 aaKnown RBP21.45■■□□□ 1.02
C2CD3-206ENST00000436679 ANKRD24Q8TF21 1146 aa21.45■■□□□ 1.02
C2CD3-206ENST00000436679 CAMKK2Q96RR4 588 aa21.45■■□□□ 1.02
C2CD3-206ENST00000436679 THRAP3Q9Y2W1 955 aaKnown RBP21.44■■□□□ 1.02
C2CD3-206ENST00000436679 RGPD5Q99666 1765 aa21.43■■□□□ 1.02
C2CD3-206ENST00000436679 CSB-PGBD3P0DP91 1061 aa21.43■■□□□ 1.02
C2CD3-206ENST00000436679 TOM1L2Q6ZVM7 507 aa21.43■■□□□ 1.02
C2CD3-206ENST00000436679 CARD10Q9BWT7 1032 aa21.43■■□□□ 1.02
C2CD3-206ENST00000436679 TNS1Q9HBL0 1735 aaKnown RBP21.41■■□□□ 1.02
C2CD3-206ENST00000436679 HSP90AB2PQ58FF8 381 aa21.41■■□□□ 1.02
C2CD3-206ENST00000436679 PARD3Q8TEW0 1356 aa21.4■■□□□ 1.02
C2CD3-206ENST00000436679 PPM1GO15355 546 aaPredicted RBP21.4■■□□□ 1.02
C2CD3-206ENST00000436679 FAM208AQ9UK61 1670 aaKnown RBP21.39■■□□□ 1.01
C2CD3-206ENST00000436679 LTV1Q96GA3 475 aaPredicted RBP21.38■■□□□ 1.01
C2CD3-206ENST00000436679 NLRP2Q9NX02 1062 aa21.38■■□□□ 1.01
C2CD3-206ENST00000436679 MAP2P11137 1827 aaKnown RBP21.38■■□□□ 1.01
C2CD3-206ENST00000436679 CDCA7Q9BWT1 371 aaPredicted RBP21.35■■□□□ 1.01
C2CD3-206ENST00000436679 MTHFSP49914 203 aa21.34■■□□□ 1.01
C2CD3-206ENST00000436679 CNGB1Q14028 1251 aaPredicted RBP21.34■■□□□ 1.01
C2CD3-206ENST00000436679 NBPF6Q5VWK0 638 aa21.33■■□□□ 1.01
C2CD3-206ENST00000436679 NBPF4Q96M43 638 aa21.33■■□□□ 1.01
C2CD3-206ENST00000436679 NCAPD2Q15021 1401 aa21.32■■□□□ 1
C2CD3-206ENST00000436679 EIF4A2Q14240 407 aaKnown RBP21.32■■□□□ 1
C2CD3-206ENST00000436679 DDB1Q16531 1140 aa21.32■■□□□ 1
C2CD3-206ENST00000436679 NBPF14Q5TI25 921 aa21.31■■□□□ 1
C2CD3-206ENST00000436679 WNK3Q9BYP7 1800 aa21.31■■□□□ 1
C2CD3-206ENST00000436679 PARP4Q9UKK3 1724 aaKnown RBP21.3■■□□□ 1
C2CD3-206ENST00000436679 PPP2R1AP30153 589 aa21.3■■□□□ 1
C2CD3-206ENST00000436679 RALBP1Q15311 655 aa21.3■■□□□ 1
C2CD3-206ENST00000436679 IL2RBP14784 551 aa21.29■■□□□ 1
C2CD3-206ENST00000436679 PTF1AQ7RTS3 328 aa21.29■■□□□ 1
C2CD3-206ENST00000436679 OVOS2A0A0G2JMS6 1433 aa21.28■■□□□ 1
C2CD3-206ENST00000436679 COL3A1P02461 1466 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms