RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 TRIM26Q12899 539 aaPredicted RBP12.6□□□□□ -0.39
CTDSPL-205ENST00000436654 DDB1Q16531 1140 aa12.6□□□□□ -0.39
CTDSPL-205ENST00000436654 YY1P25490 414 aa12.59□□□□□ -0.39
CTDSPL-205ENST00000436654 HDGFL2Q7Z4V5 671 aaPredicted RBP12.59□□□□□ -0.39
CTDSPL-205ENST00000436654 TNS1Q9HBL0 1735 aaKnown RBP12.59□□□□□ -0.39
CTDSPL-205ENST00000436654 CD163L1Q9NR16 1453 aa12.58□□□□□ -0.4
CTDSPL-205ENST00000436654 NFAT5O94916 1531 aa12.57□□□□□ -0.4
CTDSPL-205ENST00000436654 PARD3Q8TEW0 1356 aa12.57□□□□□ -0.4
CTDSPL-205ENST00000436654 OVOS2A0A0G2JMS6 1433 aa12.57□□□□□ -0.4
CTDSPL-205ENST00000436654 OVOS2A0A0J9YW53 1432 aa12.57□□□□□ -0.4
CTDSPL-205ENST00000436654 OVOS2Q6IE36 1432 aa12.57□□□□□ -0.4
CTDSPL-205ENST00000436654 ST20-MTHFSA0A0A6YYL1 179 aa12.57□□□□□ -0.4
CTDSPL-205ENST00000436654 CARD10Q9BWT7 1032 aa12.57□□□□□ -0.4
CTDSPL-205ENST00000436654 TERF2IPQ9NYB0 399 aa12.57□□□□□ -0.4
CTDSPL-205ENST00000436654 USP31Q70CQ4 1352 aa12.56□□□□□ -0.4
CTDSPL-205ENST00000436654 PTF1AQ7RTS3 328 aa12.56□□□□□ -0.4
CTDSPL-205ENST00000436654 MARCH10Q8NA82 808 aaPredicted RBP12.56□□□□□ -0.4
CTDSPL-205ENST00000436654 A0A1W2PP64 1363 aa12.56□□□□□ -0.4
CTDSPL-205ENST00000436654 C11orf95C9JLR9 678 aaPredicted RBP12.55□□□□□ -0.4
CTDSPL-205ENST00000436654 NBPF14Q5TI25 921 aa12.55□□□□□ -0.4
CTDSPL-205ENST00000436654 TESK2Q96S53 571 aa12.55□□□□□ -0.4
CTDSPL-205ENST00000436654 CDCA7Q9BWT1 371 aaPredicted RBP12.55□□□□□ -0.4
CTDSPL-205ENST00000436654 NLRP2Q9NX02 1062 aa12.55□□□□□ -0.4
CTDSPL-205ENST00000436654 COL18A1P39060 1754 aa12.55□□□□□ -0.4
CTDSPL-205ENST00000436654 AKAP12Q02952 1782 aa12.55□□□□□ -0.4
CTDSPL-205ENST00000436654 EDC4Q6P2E9 1401 aaKnown RBP12.54□□□□□ -0.4
CTDSPL-205ENST00000436654 PARP4Q9UKK3 1724 aaKnown RBP12.54□□□□□ -0.4
CTDSPL-205ENST00000436654 LRRC37A3O60309 1634 aa12.54□□□□□ -0.4
CTDSPL-205ENST00000436654 EXOC5O00471 708 aa12.53□□□□□ -0.4
CTDSPL-205ENST00000436654 PUS7Q96PZ0 661 aaKnown RBP12.53□□□□□ -0.4
CTDSPL-205ENST00000436654 BCL11BQ9C0K0 894 aaPredicted RBP12.53□□□□□ -0.4
CTDSPL-205ENST00000436654 CCDC7Q96M83 1385 aa12.53□□□□□ -0.4
CTDSPL-205ENST00000436654 ANKRD24Q8TF21 1146 aa12.52□□□□□ -0.41
CTDSPL-205ENST00000436654 ERBB3P21860 1342 aa12.52□□□□□ -0.41
CTDSPL-205ENST00000436654 MON2Q7Z3U7 1717 aa12.51□□□□□ -0.41
CTDSPL-205ENST00000436654 PEAK1Q9H792 1746 aa12.51□□□□□ -0.41
CTDSPL-205ENST00000436654 PLSCR1O15162 318 aa12.5□□□□□ -0.41
CTDSPL-205ENST00000436654 LTV1Q96GA3 475 aaPredicted RBP12.5□□□□□ -0.41
CTDSPL-205ENST00000436654 ANO8Q9HCE9 1232 aaPredicted RBP12.5□□□□□ -0.41
CTDSPL-205ENST00000436654 ABCC6O95255 1503 aa12.5□□□□□ -0.41
CTDSPL-205ENST00000436654 TNS2Q63HR2 1409 aa12.49□□□□□ -0.41
CTDSPL-205ENST00000436654 USP47Q96K76 1375 aa12.49□□□□□ -0.41
CTDSPL-205ENST00000436654 NINLQ9Y2I6 1382 aa12.49□□□□□ -0.41
CTDSPL-205ENST00000436654 KCNQ2O43526 872 aa12.49□□□□□ -0.41
CTDSPL-205ENST00000436654 IL2RBP14784 551 aa12.49□□□□□ -0.41
CTDSPL-205ENST00000436654 FBLN1P23142 703 aa12.49□□□□□ -0.41
CTDSPL-205ENST00000436654 ACSBG1Q96GR2 724 aa12.49□□□□□ -0.41
CTDSPL-205ENST00000436654 COG3Q96JB2 828 aa12.49□□□□□ -0.41
CTDSPL-205ENST00000436654 RREB1Q92766 1687 aa12.48□□□□□ -0.41
CTDSPL-205ENST00000436654 BCL9O00512 1426 aa12.48□□□□□ -0.41
CTDSPL-205ENST00000436654 TMF1P82094 1093 aa12.48□□□□□ -0.41
CTDSPL-205ENST00000436654 PROM2Q8N271 834 aa12.48□□□□□ -0.41
CTDSPL-205ENST00000436654 IP6K1Q92551 441 aa12.48□□□□□ -0.41
CTDSPL-205ENST00000436654 NUP188Q5SRE5 1749 aa12.48□□□□□ -0.41
CTDSPL-205ENST00000436654 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
CTDSPL-205ENST00000436654 ANKRD36BQ8N2N9 1353 aa12.46□□□□□ -0.41
CTDSPL-205ENST00000436654 MAP3K19Q56UN5 1328 aa12.46□□□□□ -0.41
CTDSPL-205ENST00000436654 USP54Q70EL1 1684 aa12.46□□□□□ -0.41
CTDSPL-205ENST00000436654 AMPHP49418 695 aa12.46□□□□□ -0.41
CTDSPL-205ENST00000436654 TXNRD1Q16881 649 aa12.46□□□□□ -0.41
CTDSPL-205ENST00000436654 PCGF6Q9BYE7 350 aa12.46□□□□□ -0.41
CTDSPL-205ENST00000436654 GGNBP2Q9H3C7 697 aa12.46□□□□□ -0.41
CTDSPL-205ENST00000436654 SPON1Q9HCB6 807 aa12.46□□□□□ -0.41
CTDSPL-205ENST00000436654 RGPD5Q99666 1765 aa12.46□□□□□ -0.42
CTDSPL-205ENST00000436654 HOXC9P31274 260 aa12.45□□□□□ -0.42
CTDSPL-205ENST00000436654 DDX54Q8TDD1 881 aaKnown RBP12.45□□□□□ -0.42
CTDSPL-205ENST00000436654 PDGFDQ9GZP0 370 aaPredicted RBP12.45□□□□□ -0.42
CTDSPL-205ENST00000436654 PPP1R1BQ9UD71 204 aaPredicted RBP12.45□□□□□ -0.42
CTDSPL-205ENST00000436654 WNK3Q9BYP7 1800 aa12.44□□□□□ -0.42
CTDSPL-205ENST00000436654 DCAF8L1A6NGE4 600 aa12.44□□□□□ -0.42
CTDSPL-205ENST00000436654 RRS1Q15050 365 aaKnown RBP12.44□□□□□ -0.42
CTDSPL-205ENST00000436654 IFFO2Q5TF58 517 aa12.44□□□□□ -0.42
CTDSPL-205ENST00000436654 FYB1O15117 783 aa12.43□□□□□ -0.42
CTDSPL-205ENST00000436654 ZBTB7AO95365 584 aa12.43□□□□□ -0.42
CTDSPL-205ENST00000436654 STK32BQ9NY57 414 aa12.43□□□□□ -0.42
CTDSPL-205ENST00000436654 SLC15A2Q16348 729 aa12.41□□□□□ -0.42
CTDSPL-205ENST00000436654 CDCA8Q53HL2 280 aa12.41□□□□□ -0.42
CTDSPL-205ENST00000436654 USHBP1Q8N6Y0 703 aa12.41□□□□□ -0.42
CTDSPL-205ENST00000436654 ATF5Q9Y2D1 282 aaPredicted RBP12.41□□□□□ -0.42
CTDSPL-205ENST00000436654 LTN1O94822 1766 aa12.41□□□□□ -0.42
CTDSPL-205ENST00000436654 SENP3-EIF4A1A0A087X0R7 540 aa12.4□□□□□ -0.42
CTDSPL-205ENST00000436654 SBF2Q86WG5 1849 aa12.39□□□□□ -0.43
CTDSPL-205ENST00000436654 RGPD3A6NKT7 1758 aaPredicted RBP12.39□□□□□ -0.43
CTDSPL-205ENST00000436654 RGPD4Q7Z3J3 1758 aa12.39□□□□□ -0.43
CTDSPL-205ENST00000436654 NBPF6Q5VWK0 638 aa12.39□□□□□ -0.43
CTDSPL-205ENST00000436654 ZCRB1Q8TBF4 217 aaKnown RBP12.39□□□□□ -0.43
CTDSPL-205ENST00000436654 SYTL4Q96C24 671 aaPredicted RBP12.39□□□□□ -0.43
CTDSPL-205ENST00000436654 NBPF4Q96M43 638 aa12.39□□□□□ -0.43
CTDSPL-205ENST00000436654 CARD14Q9BXL6 1004 aa12.39□□□□□ -0.43
CTDSPL-205ENST00000436654 RTL1A6NKG5 1358 aa12.39□□□□□ -0.43
CTDSPL-205ENST00000436654 PRIM1P49642 420 aaKnown RBP12.38□□□□□ -0.43
CTDSPL-205ENST00000436654 HSP90AB2PQ58FF8 381 aa12.38□□□□□ -0.43
CTDSPL-205ENST00000436654 POLR3GLQ9BT43 218 aa12.38□□□□□ -0.43
CTDSPL-205ENST00000436654 TIMELESSQ9UNS1 1208 aa12.38□□□□□ -0.43
CTDSPL-205ENST00000436654 NHSQ6T4R5 1651 aa12.38□□□□□ -0.43
CTDSPL-205ENST00000436654 NSD3Q9BZ95 1437 aa12.37□□□□□ -0.43
CTDSPL-205ENST00000436654 MEGF6O75095 1541 aa12.37□□□□□ -0.43
CTDSPL-205ENST00000436654 ZNF827Q17R98 1081 aa12.37□□□□□ -0.43
CTDSPL-205ENST00000436654 LRRC4BQ9NT99 713 aa12.37□□□□□ -0.43
CTDSPL-205ENST00000436654 PTGER2P43116 358 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms