RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 WDR17Q8IZU2 1322 aa16.74■□□□□ 0.27
LINC00271-202ENST00000436554 PARP4Q9UKK3 1724 aaKnown RBP16.74■□□□□ 0.27
LINC00271-202ENST00000436554 STK32BQ9NY57 414 aa16.74■□□□□ 0.27
LINC00271-202ENST00000436554 USP6P35125 1406 aa16.73■□□□□ 0.27
LINC00271-202ENST00000436554 EXOC5O00471 708 aa16.73■□□□□ 0.27
LINC00271-202ENST00000436554 SOX12O15370 315 aa16.73■□□□□ 0.27
LINC00271-202ENST00000436554 CSB-PGBD3P0DP91 1061 aa16.73■□□□□ 0.27
LINC00271-202ENST00000436554 SLC15A2Q16348 729 aa16.73■□□□□ 0.27
LINC00271-202ENST00000436554 ARHGEF25Q86VW2 580 aa16.73■□□□□ 0.27
LINC00271-202ENST00000436554 ZNF784Q8NCA9 323 aaPredicted RBP16.73■□□□□ 0.27
LINC00271-202ENST00000436554 SYT17Q9BSW7 474 aa16.73■□□□□ 0.27
LINC00271-202ENST00000436554 CARD10Q9BWT7 1032 aa16.73■□□□□ 0.27
LINC00271-202ENST00000436554 PEAK1Q9H792 1746 aa16.73■□□□□ 0.27
LINC00271-202ENST00000436554 FHDC1Q9C0D6 1143 aaPredicted RBP16.71■□□□□ 0.27
LINC00271-202ENST00000436554 BCL9O00512 1426 aa16.7■□□□□ 0.26
LINC00271-202ENST00000436554 KCNH5Q8NCM2 988 aa16.7■□□□□ 0.26
LINC00271-202ENST00000436554 TTC21BQ7Z4L5 1316 aa16.7■□□□□ 0.26
LINC00271-202ENST00000436554 ZNF692Q9BU19 519 aaPredicted RBP16.69■□□□□ 0.26
LINC00271-202ENST00000436554 MTFR1LQ9H019 292 aa16.68■□□□□ 0.26
LINC00271-202ENST00000436554 SLIT3O75094 1523 aa16.68■□□□□ 0.26
LINC00271-202ENST00000436554 SBF2Q86WG5 1849 aa16.68■□□□□ 0.26
LINC00271-202ENST00000436554 EVC2Q86UK5 1308 aa16.68■□□□□ 0.26
LINC00271-202ENST00000436554 LRRC37A3O60309 1634 aa16.67■□□□□ 0.26
LINC00271-202ENST00000436554 SGIP1Q9BQI5 828 aa16.67■□□□□ 0.26
LINC00271-202ENST00000436554 UTRNP46939 3433 aa16.67■□□□□ 0.26
LINC00271-202ENST00000436554 CASZ1Q86V15 1759 aa16.66■□□□□ 0.26
LINC00271-202ENST00000436554 ACSBG1Q96GR2 724 aa16.66■□□□□ 0.26
LINC00271-202ENST00000436554 KIAA1210Q9ULL0 1709 aa16.65■□□□□ 0.26
LINC00271-202ENST00000436554 CPSF1Q10570 1443 aaKnown RBP16.65■□□□□ 0.26
LINC00271-202ENST00000436554 COL18A1P39060 1754 aa16.65■□□□□ 0.26
LINC00271-202ENST00000436554 RGPD3A6NKT7 1758 aaPredicted RBP16.64■□□□□ 0.25
LINC00271-202ENST00000436554 RGPD4Q7Z3J3 1758 aa16.64■□□□□ 0.25
LINC00271-202ENST00000436554 ARXQ96QS3 562 aa16.64■□□□□ 0.25
LINC00271-202ENST00000436554 L3MBTL2Q969R5 705 aa16.63■□□□□ 0.25
LINC00271-202ENST00000436554 CCDC7Q96M83 1385 aa16.63■□□□□ 0.25
LINC00271-202ENST00000436554 MSH5O43196 834 aa16.62■□□□□ 0.25
LINC00271-202ENST00000436554 TTC21AQ8NDW8 1320 aa16.62■□□□□ 0.25
LINC00271-202ENST00000436554 NLRP2Q9NX02 1062 aa16.61■□□□□ 0.25
LINC00271-202ENST00000436554 MYOM1P52179 1685 aa16.61■□□□□ 0.25
LINC00271-202ENST00000436554 PIK3C2AO00443 1686 aa16.6■□□□□ 0.25
LINC00271-202ENST00000436554 SENP3-EIF4A1A0A087X0R7 540 aa16.6■□□□□ 0.25
LINC00271-202ENST00000436554 C1QTNF8P60827 252 aa16.6■□□□□ 0.25
LINC00271-202ENST00000436554 IL2RBP14784 551 aa16.59■□□□□ 0.25
LINC00271-202ENST00000436554 ZNF827Q17R98 1081 aa16.59■□□□□ 0.25
LINC00271-202ENST00000436554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.59■□□□□ 0.25
LINC00271-202ENST00000436554 LRRC4BQ9NT99 713 aa16.59■□□□□ 0.25
LINC00271-202ENST00000436554 GPR162Q16538 588 aa16.58■□□□□ 0.24
LINC00271-202ENST00000436554 KTN1Q86UP2 1357 aaKnown RBP16.58■□□□□ 0.24
LINC00271-202ENST00000436554 RGPD5Q99666 1765 aa16.57■□□□□ 0.24
LINC00271-202ENST00000436554 QRICH2Q9H0J4 1663 aa16.57■□□□□ 0.24
LINC00271-202ENST00000436554 TNS2Q63HR2 1409 aa16.57■□□□□ 0.24
LINC00271-202ENST00000436554 NME9Q86XW9 330 aa16.56■□□□□ 0.24
LINC00271-202ENST00000436554 AKAP12Q02952 1782 aa16.56■□□□□ 0.24
LINC00271-202ENST00000436554 ERBB3P21860 1342 aa16.55■□□□□ 0.24
LINC00271-202ENST00000436554 KLHL34Q8N239 644 aa16.55■□□□□ 0.24
LINC00271-202ENST00000436554 ANKRD24Q8TF21 1146 aa16.55■□□□□ 0.24
LINC00271-202ENST00000436554 SIN3AQ96ST3 1273 aa16.55■□□□□ 0.24
LINC00271-202ENST00000436554 NFAT5O94916 1531 aa16.55■□□□□ 0.24
LINC00271-202ENST00000436554 AKT1S1Q96B36 256 aa16.54■□□□□ 0.24
LINC00271-202ENST00000436554 WNK3Q9BYP7 1800 aa16.54■□□□□ 0.24
LINC00271-202ENST00000436554 MAP3K5Q99683 1374 aa16.53■□□□□ 0.24
LINC00271-202ENST00000436554 DDX54Q8TDD1 881 aaKnown RBP16.53■□□□□ 0.24
LINC00271-202ENST00000436554 SLC16A10Q8TF71 515 aa16.53■□□□□ 0.24
LINC00271-202ENST00000436554 ROCK2O75116 1388 aaKnown RBP16.52■□□□□ 0.24
LINC00271-202ENST00000436554 USP31Q70CQ4 1352 aa16.52■□□□□ 0.24
LINC00271-202ENST00000436554 KCNQ4P56696 695 aa16.52■□□□□ 0.24
LINC00271-202ENST00000436554 NEUROD1Q13562 356 aa16.52■□□□□ 0.24
LINC00271-202ENST00000436554 PELP1Q8IZL8 1130 aaKnown RBP16.52■□□□□ 0.24
LINC00271-202ENST00000436554 TRPM1Q7Z4N2 1603 aa16.52■□□□□ 0.23
LINC00271-202ENST00000436554 POLD1P28340 1107 aa16.51■□□□□ 0.23
LINC00271-202ENST00000436554 SLC27A3Q5K4L6 730 aa16.51■□□□□ 0.23
LINC00271-202ENST00000436554 TMC1Q8TDI8 760 aa16.51■□□□□ 0.23
LINC00271-202ENST00000436554 SLC12A5Q9H2X9 1139 aa16.5■□□□□ 0.23
LINC00271-202ENST00000436554 TFCP2L1Q9NZI6 479 aa16.5■□□□□ 0.23
LINC00271-202ENST00000436554 PRIM1P49642 420 aaKnown RBP16.49■□□□□ 0.23
LINC00271-202ENST00000436554 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
LINC00271-202ENST00000436554 LTV1Q96GA3 475 aaPredicted RBP16.49■□□□□ 0.23
LINC00271-202ENST00000436554 NHSQ6T4R5 1651 aa16.49■□□□□ 0.23
LINC00271-202ENST00000436554 KAT6BQ8WYB5 2073 aa16.49■□□□□ 0.23
LINC00271-202ENST00000436554 PNPLA7Q6ZV29 1317 aa16.48■□□□□ 0.23
LINC00271-202ENST00000436554 GIGYF1O75420 1035 aaPredicted RBP16.48■□□□□ 0.23
LINC00271-202ENST00000436554 HDGFL2Q7Z4V5 671 aaPredicted RBP16.48■□□□□ 0.23
LINC00271-202ENST00000436554 NLGN2Q8NFZ4 835 aa16.48■□□□□ 0.23
LINC00271-202ENST00000436554 SYTL4Q96C24 671 aaPredicted RBP16.48■□□□□ 0.23
LINC00271-202ENST00000436554 CHD4Q14839 1912 aa16.48■□□□□ 0.23
LINC00271-202ENST00000436554 ABCC6O95255 1503 aa16.48■□□□□ 0.23
LINC00271-202ENST00000436554 SBNO2Q9Y2G9 1366 aa16.48■□□□□ 0.23
LINC00271-202ENST00000436554 IP6K1Q92551 441 aa16.47■□□□□ 0.23
LINC00271-202ENST00000436554 PAPPAQ13219 1627 aa16.46■□□□□ 0.23
LINC00271-202ENST00000436554 GOLGB1Q14789 3259 aaKnown RBP16.46■□□□□ 0.22
LINC00271-202ENST00000436554 BTAF1O14981 1849 aa16.45■□□□□ 0.22
LINC00271-202ENST00000436554 CD163L1Q9NR16 1453 aa16.44■□□□□ 0.22
LINC00271-202ENST00000436554 YBX3P16989 372 aaKnown RBP eCLIP16.43■□□□□ 0.22
LINC00271-202ENST00000436554 PIAS4Q8N2W9 510 aaPredicted RBP16.43■□□□□ 0.22
LINC00271-202ENST00000436554 TERF2IPQ9NYB0 399 aa16.43■□□□□ 0.22
LINC00271-202ENST00000436554 GRIN3BO60391 1043 aa16.42■□□□□ 0.22
LINC00271-202ENST00000436554 FBLN1P23142 703 aa16.42■□□□□ 0.22
LINC00271-202ENST00000436554 IFFO2Q5TF58 517 aa16.42■□□□□ 0.22
LINC00271-202ENST00000436554 COL23A1Q86Y22 540 aaPredicted RBP16.42■□□□□ 0.22
LINC00271-202ENST00000436554 ZCRB1Q8TBF4 217 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms