RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 PDE3BQ13370 1112 aa15.33■□□□□ 0.04
HMGCL-204ENST00000436439 AXIN2Q9Y2T1 843 aa15.33■□□□□ 0.04
HMGCL-204ENST00000436439 NFAT5O94916 1531 aa15.32■□□□□ 0.04
HMGCL-204ENST00000436439 APBA3O96018 575 aa15.32■□□□□ 0.04
HMGCL-204ENST00000436439 R3HDM1Q15032 1099 aaKnown RBP15.32■□□□□ 0.04
HMGCL-204ENST00000436439 USP54Q70EL1 1684 aa15.31■□□□□ 0.04
HMGCL-204ENST00000436439 ZNF692Q9BU19 519 aaPredicted RBP15.31■□□□□ 0.04
HMGCL-204ENST00000436439 CD163L1Q9NR16 1453 aa15.3■□□□□ 0.04
HMGCL-204ENST00000436439 EIF4G2P78344 907 aaKnown RBP eCLIP15.3■□□□□ 0.04
HMGCL-204ENST00000436439 KTN1Q86UP2 1357 aaKnown RBP15.3■□□□□ 0.04
HMGCL-204ENST00000436439 SBNO2Q9Y2G9 1366 aa15.3■□□□□ 0.04
HMGCL-204ENST00000436439 LTN1O94822 1766 aa15.29■□□□□ 0.04
HMGCL-204ENST00000436439 SOX12O15370 315 aa15.29■□□□□ 0.04
HMGCL-204ENST00000436439 ARHGEF25Q86VW2 580 aa15.29■□□□□ 0.04
HMGCL-204ENST00000436439 TTC21AQ8NDW8 1320 aa15.28■□□□□ 0.04
HMGCL-204ENST00000436439 TOM1L2Q6ZVM7 507 aa15.28■□□□□ 0.04
HMGCL-204ENST00000436439 CARD11Q9BXL7 1154 aa15.28■□□□□ 0.04
HMGCL-204ENST00000436439 WDR17Q8IZU2 1322 aa15.28■□□□□ 0.04
HMGCL-204ENST00000436439 PARD3Q8TEW0 1356 aa15.27■□□□□ 0.04
HMGCL-204ENST00000436439 USP47Q96K76 1375 aa15.27■□□□□ 0.04
HMGCL-204ENST00000436439 RGPD3A6NKT7 1758 aaPredicted RBP15.27■□□□□ 0.03
HMGCL-204ENST00000436439 RGPD4Q7Z3J3 1758 aa15.27■□□□□ 0.03
HMGCL-204ENST00000436439 OVOS2A0A0G2JMS6 1433 aa15.27■□□□□ 0.03
HMGCL-204ENST00000436439 OVOS2A0A0J9YW53 1432 aa15.27■□□□□ 0.03
HMGCL-204ENST00000436439 OVOS2Q6IE36 1432 aa15.27■□□□□ 0.03
HMGCL-204ENST00000436439 KCNH5Q8NCM2 988 aa15.26■□□□□ 0.03
HMGCL-204ENST00000436439 HSPA5P11021 654 aaKnown RBP15.25■□□□□ 0.03
HMGCL-204ENST00000436439 DDB1Q16531 1140 aa15.24■□□□□ 0.03
HMGCL-204ENST00000436439 PTF1AQ7RTS3 328 aa15.24■□□□□ 0.03
HMGCL-204ENST00000436439 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.24■□□□□ 0.03
HMGCL-204ENST00000436439 ABCC6O95255 1503 aa15.24■□□□□ 0.03
HMGCL-204ENST00000436439 USP31Q70CQ4 1352 aa15.24■□□□□ 0.03
HMGCL-204ENST00000436439 NME9Q86XW9 330 aa15.24■□□□□ 0.03
HMGCL-204ENST00000436439 MARCH10Q8NA82 808 aaPredicted RBP15.23■□□□□ 0.03
HMGCL-204ENST00000436439 SLC12A5Q9H2X9 1139 aa15.23■□□□□ 0.03
HMGCL-204ENST00000436439 TMC1Q8TDI8 760 aa15.22■□□□□ 0.03
HMGCL-204ENST00000436439 CARD10Q9BWT7 1032 aa15.22■□□□□ 0.03
HMGCL-204ENST00000436439 CSB-PGBD3P0DP91 1061 aa15.21■□□□□ 0.02
HMGCL-204ENST00000436439 A0A1W2PP64 1363 aa15.2■□□□□ 0.02
HMGCL-204ENST00000436439 EDC4Q6P2E9 1401 aaKnown RBP15.2■□□□□ 0.02
HMGCL-204ENST00000436439 DIEXFQ68CQ4 756 aaKnown RBP15.2■□□□□ 0.02
HMGCL-204ENST00000436439 C11orf95C9JLR9 678 aaPredicted RBP15.19■□□□□ 0.02
HMGCL-204ENST00000436439 BCL9O00512 1426 aa15.18■□□□□ 0.02
HMGCL-204ENST00000436439 CASZ1Q86V15 1759 aa15.18■□□□□ 0.02
HMGCL-204ENST00000436439 PLSCR1O15162 318 aa15.18■□□□□ 0.02
HMGCL-204ENST00000436439 NBPF14Q5TI25 921 aa15.18■□□□□ 0.02
HMGCL-204ENST00000436439 HDGFL2Q7Z4V5 671 aaPredicted RBP15.18■□□□□ 0.02
HMGCL-204ENST00000436439 TESK2Q96S53 571 aa15.18■□□□□ 0.02
HMGCL-204ENST00000436439 CDCA7Q9BWT1 371 aaPredicted RBP15.18■□□□□ 0.02
HMGCL-204ENST00000436439 ERBB3P21860 1342 aa15.18■□□□□ 0.02
HMGCL-204ENST00000436439 CCDC7Q96M83 1385 aa15.18■□□□□ 0.02
HMGCL-204ENST00000436439 TNS2Q63HR2 1409 aa15.17■□□□□ 0.02
HMGCL-204ENST00000436439 BCL11BQ9C0K0 894 aaPredicted RBP15.17■□□□□ 0.02
HMGCL-204ENST00000436439 NHSQ6T4R5 1651 aa15.17■□□□□ 0.02
HMGCL-204ENST00000436439 ST20-MTHFSA0A0A6YYL1 179 aa15.16■□□□□ 0.02
HMGCL-204ENST00000436439 PROM2Q8N271 834 aa15.16■□□□□ 0.02
HMGCL-204ENST00000436439 ANO8Q9HCE9 1232 aaPredicted RBP15.16■□□□□ 0.02
HMGCL-204ENST00000436439 RGPD2P0DJD1 1756 aa15.16■□□□□ 0.02
HMGCL-204ENST00000436439 EXOC5O00471 708 aa15.15■□□□□ 0.02
HMGCL-204ENST00000436439 PUS7Q96PZ0 661 aaKnown RBP15.15■□□□□ 0.02
HMGCL-204ENST00000436439 TERF2IPQ9NYB0 399 aa15.14■□□□□ 0.01
HMGCL-204ENST00000436439 FAM208AQ9UK61 1670 aaKnown RBP15.14■□□□□ 0.01
HMGCL-204ENST00000436439 BTAF1O14981 1849 aa15.13■□□□□ 0.01
HMGCL-204ENST00000436439 KCNQ2O43526 872 aa15.13■□□□□ 0.01
HMGCL-204ENST00000436439 SLC24A1O60721 1099 aa15.13■□□□□ 0.01
HMGCL-204ENST00000436439 ANKRD24Q8TF21 1146 aa15.13■□□□□ 0.01
HMGCL-204ENST00000436439 NLRP2Q9NX02 1062 aa15.13■□□□□ 0.01
HMGCL-204ENST00000436439 WASHC2AQ641Q2 1341 aa15.12■□□□□ 0.01
HMGCL-204ENST00000436439 PDGFDQ9GZP0 370 aaPredicted RBP15.11■□□□□ 0.01
HMGCL-204ENST00000436439 NINLQ9Y2I6 1382 aa15.11■□□□□ 0.01
HMGCL-204ENST00000436439 SHANK3Q9BYB0 1731 aa15.11■□□□□ 0.01
HMGCL-204ENST00000436439 IL2RBP14784 551 aa15.11■□□□□ 0.01
HMGCL-204ENST00000436439 FBLN1P23142 703 aa15.11■□□□□ 0.01
HMGCL-204ENST00000436439 ACSBG1Q96GR2 724 aa15.11■□□□□ 0.01
HMGCL-204ENST00000436439 KAT6BQ8WYB5 2073 aa15.1■□□□□ 0.01
HMGCL-204ENST00000436439 TXNRD1Q16881 649 aa15.1■□□□□ 0.01
HMGCL-204ENST00000436439 SPON1Q9HCB6 807 aa15.1■□□□□ 0.01
HMGCL-204ENST00000436439 PAPPAQ13219 1627 aa15.09■□□□□ 0.01
HMGCL-204ENST00000436439 KIF7Q2M1P5 1343 aa15.09■□□□□ 0.01
HMGCL-204ENST00000436439 KIF20BQ96Q89 1820 aa15.09■□□□□ 0.01
HMGCL-204ENST00000436439 IP6K1Q92551 441 aa15.09■□□□□ 0.01
HMGCL-204ENST00000436439 ANKRD36BQ8N2N9 1353 aa15.08■□□□□ 0
HMGCL-204ENST00000436439 MAP3K19Q56UN5 1328 aa15.08■□□□□ 0
HMGCL-204ENST00000436439 LTV1Q96GA3 475 aaPredicted RBP15.08■□□□□ 0
HMGCL-204ENST00000436439 MYOM1P52179 1685 aa15.08■□□□□ 0
HMGCL-204ENST00000436439 DOT1LQ8TEK3 1739 aa15.07■□□□□ 0
HMGCL-204ENST00000436439 TMF1P82094 1093 aa15.07■□□□□ 0
HMGCL-204ENST00000436439 COG3Q96JB2 828 aa15.07■□□□□ 0
HMGCL-204ENST00000436439 HOXC9P31274 260 aa15.06■□□□□ 0
HMGCL-204ENST00000436439 SLC15A2Q16348 729 aa15.05■□□□□ -0
HMGCL-204ENST00000436439 PPP1R1BQ9UD71 204 aaPredicted RBP15.05■□□□□ -0
HMGCL-204ENST00000436439 ZBTB7AO95365 584 aa15.04■□□□□ -0
HMGCL-204ENST00000436439 CDCA8Q53HL2 280 aa15.04■□□□□ -0
HMGCL-204ENST00000436439 FYB1O15117 783 aa15.03■□□□□ -0
HMGCL-204ENST00000436439 DDX10Q13206 875 aaKnown RBP15.03■□□□□ -0
HMGCL-204ENST00000436439 RRS1Q15050 365 aaKnown RBP15.03■□□□□ -0
HMGCL-204ENST00000436439 GGNBP2Q9H3C7 697 aa15.03■□□□□ -0
HMGCL-204ENST00000436439 STK32BQ9NY57 414 aa15.03■□□□□ -0
HMGCL-204ENST00000436439 TUBGCP6Q96RT7 1819 aa15.03■□□□□ -0
HMGCL-204ENST00000436439 MEGF6O75095 1541 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms