RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 MEIOBQ8N635 442 aa9.24□□□□□ -0.93
LINC00353-201ENST00000435401 CDV3Q9UKY7 258 aaKnown RBP9.24□□□□□ -0.93
LINC00353-201ENST00000435401 ZC3H4Q9UPT8 1303 aaKnown RBP9.24□□□□□ -0.93
LINC00353-201ENST00000435401 SOBPA7XYQ1 873 aa9.23□□□□□ -0.93
LINC00353-201ENST00000435401 MAN1A2O60476 641 aa9.23□□□□□ -0.93
LINC00353-201ENST00000435401 NR6A1Q15406 480 aa9.23□□□□□ -0.93
LINC00353-201ENST00000435401 FBXO31Q5XUX0 539 aaPredicted RBP9.23□□□□□ -0.93
LINC00353-201ENST00000435401 AP1G2O75843 785 aa9.22□□□□□ -0.93
LINC00353-201ENST00000435401 PTK2Q05397 1052 aa9.22□□□□□ -0.93
LINC00353-201ENST00000435401 ZBTB33Q86T24 672 aa9.22□□□□□ -0.93
LINC00353-201ENST00000435401 TSEN34Q9BSV6 310 aaKnown RBP9.22□□□□□ -0.93
LINC00353-201ENST00000435401 PGPEP1Q9NXJ5 209 aa9.21□□□□□ -0.94
LINC00353-201ENST00000435401 GPSM3Q9Y4H4 160 aa9.21□□□□□ -0.94
LINC00353-201ENST00000435401 FAM181BA6NEQ2 426 aa9.2□□□□□ -0.94
LINC00353-201ENST00000435401 PPP1R26Q5T8A7 1209 aaPredicted RBP9.2□□□□□ -0.94
LINC00353-201ENST00000435401 PNMA1Q8ND90 353 aa9.2□□□□□ -0.94
LINC00353-201ENST00000435401 SLC10A4Q96EP9 437 aa9.2□□□□□ -0.94
LINC00353-201ENST00000435401 ERBB4Q15303 1308 aa9.2□□□□□ -0.94
LINC00353-201ENST00000435401 DHX9Q08211 1270 aaKnown RBP9.19□□□□□ -0.94
LINC00353-201ENST00000435401 KCTD15Q96SI1 283 aaPredicted RBP9.19□□□□□ -0.94
LINC00353-201ENST00000435401 SOS2Q07890 1332 aaPredicted RBP9.19□□□□□ -0.94
LINC00353-201ENST00000435401 Q6ZVU0 165 aa9.17□□□□□ -0.94
LINC00353-201ENST00000435401 ZSCAN1Q8NBB4 408 aa9.17□□□□□ -0.94
LINC00353-201ENST00000435401 VSIG8P0DPA2 414 aa9.16□□□□□ -0.94
LINC00353-201ENST00000435401 PPFIA3O75145 1194 aa9.15□□□□□ -0.94
LINC00353-201ENST00000435401 RFC5P40937 340 aa9.15□□□□□ -0.94
LINC00353-201ENST00000435401 ADAM32Q8TC27 787 aa9.15□□□□□ -0.94
LINC00353-201ENST00000435401 OCSTAMPQ9BR26 566 aa9.15□□□□□ -0.94
LINC00353-201ENST00000435401 GOPCQ9HD26 462 aa9.15□□□□□ -0.94
LINC00353-201ENST00000435401 DNMT3LQ9UJW3 386 aa9.15□□□□□ -0.94
LINC00353-201ENST00000435401 TTLL8A6PVC2 850 aa9.14□□□□□ -0.95
LINC00353-201ENST00000435401 USP17L8P0C7I0 530 aa9.14□□□□□ -0.95
LINC00353-201ENST00000435401 LORP23490 312 aaPredicted RBP9.14□□□□□ -0.95
LINC00353-201ENST00000435401 CBLBQ13191 982 aa9.14□□□□□ -0.95
LINC00353-201ENST00000435401 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.14□□□□□ -0.95
LINC00353-201ENST00000435401 EPS8L1Q8TE68 723 aa9.14□□□□□ -0.95
LINC00353-201ENST00000435401 PCMTD1Q96MG8 357 aaPredicted RBP9.14□□□□□ -0.95
LINC00353-201ENST00000435401 INTS6LQ5JSJ4 861 aaKnown RBP9.13□□□□□ -0.95
LINC00353-201ENST00000435401 HMX1Q9NP08 348 aaPredicted RBP9.13□□□□□ -0.95
LINC00353-201ENST00000435401 SPINT1O43278 529 aa9.12□□□□□ -0.95
LINC00353-201ENST00000435401 NBPF20Q3BBV1 942 aa9.12□□□□□ -0.95
LINC00353-201ENST00000435401 TMEM259Q4ZIN3 620 aa9.12□□□□□ -0.95
LINC00353-201ENST00000435401 DZIP3Q86Y13 1208 aaKnown RBP9.11□□□□□ -0.95
LINC00353-201ENST00000435401 FIGNL2A6NMB9 653 aa9.1□□□□□ -0.95
LINC00353-201ENST00000435401 PTSQ03393 145 aa9.08□□□□□ -0.96
LINC00353-201ENST00000435401 TRIM52Q96A61 297 aa9.08□□□□□ -0.96
LINC00353-201ENST00000435401 NEUROD2Q15784 382 aa9.07□□□□□ -0.96
LINC00353-201ENST00000435401 AGBL1Q96MI9 1066 aa9.07□□□□□ -0.96
LINC00353-201ENST00000435401 TMPRSS4Q9NRS4 437 aa9.07□□□□□ -0.96
LINC00353-201ENST00000435401 RELBQ01201 579 aa9.06□□□□□ -0.96
LINC00353-201ENST00000435401 IL27Q8NEV9 243 aa9.06□□□□□ -0.96
LINC00353-201ENST00000435401 TRIM34Q9BYJ4 488 aa9.06□□□□□ -0.96
LINC00353-201ENST00000435401 ESPNB1AK53 854 aa9.05□□□□□ -0.96
LINC00353-201ENST00000435401 RAB15P59190 212 aa9.05□□□□□ -0.96
LINC00353-201ENST00000435401 SEPT12Q8IYM1 358 aa9.05□□□□□ -0.96
LINC00353-201ENST00000435401 ERVH48-1M5A8F1 160 aa9.04□□□□□ -0.96
LINC00353-201ENST00000435401 CTSOP43234 321 aaPredicted RBP9.04□□□□□ -0.96
LINC00353-201ENST00000435401 CCDC155Q8N6L0 562 aa9.04□□□□□ -0.96
LINC00353-201ENST00000435401 ZNF784Q8NCA9 323 aaPredicted RBP9.04□□□□□ -0.96
LINC00353-201ENST00000435401 NANOS1Q8WY41 292 aaKnown RBP9.04□□□□□ -0.96
LINC00353-201ENST00000435401 INSM2Q96T92 566 aaPredicted RBP9.04□□□□□ -0.96
LINC00353-201ENST00000435401 SLC35F4A4IF30 521 aa9.03□□□□□ -0.96
LINC00353-201ENST00000435401 ZBBXA8MT70 800 aa9.03□□□□□ -0.96
LINC00353-201ENST00000435401 ADH1AP07327 375 aa9.03□□□□□ -0.96
LINC00353-201ENST00000435401 ZNF395Q9H8N7 513 aaPredicted RBP9.03□□□□□ -0.96
LINC00353-201ENST00000435401 POLMQ9NP87 494 aaPredicted RBP9.03□□□□□ -0.96
LINC00353-201ENST00000435401 LILRA1O75019 489 aa9.02□□□□□ -0.97
LINC00353-201ENST00000435401 ADD1P35611 737 aaKnown RBP9.02□□□□□ -0.97
LINC00353-201ENST00000435401 PTGIRP43119 386 aa9.01□□□□□ -0.97
LINC00353-201ENST00000435401 CCDC125Q86Z20 511 aa9.01□□□□□ -0.97
LINC00353-201ENST00000435401 GPR161Q8N6U8 529 aaKnown RBP9.01□□□□□ -0.97
LINC00353-201ENST00000435401 PRKCSHP14314 528 aaPredicted RBP9□□□□□ -0.97
LINC00353-201ENST00000435401 RNF217Q8TC41 542 aa9□□□□□ -0.97
LINC00353-201ENST00000435401 GJD4Q96KN9 370 aaPredicted RBP9□□□□□ -0.97
LINC00353-201ENST00000435401 PCDHB9Q9Y5E1 797 aa8.99□□□□□ -0.97
LINC00353-201ENST00000435401 GIGYF1O75420 1035 aaPredicted RBP8.98□□□□□ -0.97
LINC00353-201ENST00000435401 ITGA6P23229 1130 aa8.98□□□□□ -0.97
LINC00353-201ENST00000435401 MCCD1P59942 119 aaPredicted RBP8.98□□□□□ -0.97
LINC00353-201ENST00000435401 KDF1Q8NAX2 398 aaPredicted RBP8.98□□□□□ -0.97
LINC00353-201ENST00000435401 BANK1Q8NDB2 785 aa8.98□□□□□ -0.97
LINC00353-201ENST00000435401 CNTNAP3BQ96NU0 1288 aa8.98□□□□□ -0.97
LINC00353-201ENST00000435401 CNTNAP3Q9BZ76 1288 aa8.98□□□□□ -0.97
LINC00353-201ENST00000435401 FBXO45P0C2W1 286 aa8.97□□□□□ -0.97
LINC00353-201ENST00000435401 BRPF1P55201 1214 aaPredicted RBP8.97□□□□□ -0.97
LINC00353-201ENST00000435401 KRT76Q01546 638 aa8.97□□□□□ -0.97
LINC00353-201ENST00000435401 SV2AQ7L0J3 742 aa8.97□□□□□ -0.97
LINC00353-201ENST00000435401 COL25A1Q9BXS0 654 aaPredicted RBP8.97□□□□□ -0.97
LINC00353-201ENST00000435401 CYLDQ9NQC7 956 aa8.97□□□□□ -0.97
LINC00353-201ENST00000435401 RNF20Q5VTR2 975 aa8.96□□□□□ -0.98
LINC00353-201ENST00000435401 LYSMD3Q7Z3D4 306 aa8.96□□□□□ -0.98
LINC00353-201ENST00000435401 VWA5B2Q8N398 1253 aa8.96□□□□□ -0.98
LINC00353-201ENST00000435401 ZNF592Q92610 1267 aa8.96□□□□□ -0.98
LINC00353-201ENST00000435401 FOXD4L5Q5VV16 416 aaPredicted RBP8.95□□□□□ -0.98
LINC00353-201ENST00000435401 CDC14CA4D256 554 aa8.94□□□□□ -0.98
LINC00353-201ENST00000435401 ATP5J2-PTCD1G3V325 749 aa8.94□□□□□ -0.98
LINC00353-201ENST00000435401 SOCS7O14512 581 aa8.94□□□□□ -0.98
LINC00353-201ENST00000435401 RNF144AP50876 292 aaPredicted RBP8.94□□□□□ -0.98
LINC00353-201ENST00000435401 NR1H3Q13133 447 aa8.94□□□□□ -0.98
LINC00353-201ENST00000435401 ZNF330Q9Y3S2 320 aaPredicted RBP8.94□□□□□ -0.98
LINC00353-201ENST00000435401 SENP3-EIF4A1A0A087X0R7 540 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms