RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 PDE3BQ13370 1112 aa31.83■■■□□ 2.69
HMG20B-205ENST00000435022 TONSLQ96HA7 1378 aa31.82■■■□□ 2.69
HMG20B-205ENST00000435022 NUP188Q5SRE5 1749 aa31.8■■■□□ 2.68
HMG20B-205ENST00000435022 WDR17Q8IZU2 1322 aa31.78■■■□□ 2.68
HMG20B-205ENST00000435022 SOX12O15370 315 aa31.78■■■□□ 2.68
HMG20B-205ENST00000435022 APBA3O96018 575 aa31.78■■■□□ 2.68
HMG20B-205ENST00000435022 R3HDM1Q15032 1099 aaKnown RBP31.77■■■□□ 2.68
HMG20B-205ENST00000435022 SBF2Q86WG5 1849 aa31.76■■■□□ 2.67
HMG20B-205ENST00000435022 TOM1L2Q6ZVM7 507 aa31.75■■■□□ 2.67
HMG20B-205ENST00000435022 KCNH5Q8NCM2 988 aa31.75■■■□□ 2.67
HMG20B-205ENST00000435022 USP31Q70CQ4 1352 aa31.75■■■□□ 2.67
HMG20B-205ENST00000435022 PARD3Q8TEW0 1356 aa31.74■■■□□ 2.67
HMG20B-205ENST00000435022 ABCC6O95255 1503 aa31.74■■■□□ 2.67
HMG20B-205ENST00000435022 NME9Q86XW9 330 aa31.73■■■□□ 2.67
HMG20B-205ENST00000435022 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.73■■■□□ 2.67
HMG20B-205ENST00000435022 SLC12A5Q9H2X9 1139 aa31.73■■■□□ 2.67
HMG20B-205ENST00000435022 OVOS2A0A0G2JMS6 1433 aa31.73■■■□□ 2.67
HMG20B-205ENST00000435022 OVOS2A0A0J9YW53 1432 aa31.73■■■□□ 2.67
HMG20B-205ENST00000435022 OVOS2Q6IE36 1432 aa31.73■■■□□ 2.67
HMG20B-205ENST00000435022 TESK2Q96S53 571 aa31.7■■■□□ 2.67
HMG20B-205ENST00000435022 A0A1W2PP64 1363 aa31.69■■■□□ 2.66
HMG20B-205ENST00000435022 LTN1O94822 1766 aa31.69■■■□□ 2.66
HMG20B-205ENST00000435022 PTF1AQ7RTS3 328 aa31.68■■■□□ 2.66
HMG20B-205ENST00000435022 EDC4Q6P2E9 1401 aaKnown RBP31.67■■■□□ 2.66
HMG20B-205ENST00000435022 DDB1Q16531 1140 aa31.67■■■□□ 2.66
HMG20B-205ENST00000435022 TMC1Q8TDI8 760 aa31.67■■■□□ 2.66
HMG20B-205ENST00000435022 CARD10Q9BWT7 1032 aa31.67■■■□□ 2.66
HMG20B-205ENST00000435022 RGPD3A6NKT7 1758 aaPredicted RBP31.66■■■□□ 2.66
HMG20B-205ENST00000435022 RGPD4Q7Z3J3 1758 aa31.66■■■□□ 2.66
HMG20B-205ENST00000435022 MARCH10Q8NA82 808 aaPredicted RBP31.65■■■□□ 2.66
HMG20B-205ENST00000435022 ST20-MTHFSA0A0A6YYL1 179 aa31.62■■■□□ 2.65
HMG20B-205ENST00000435022 TRIM26Q12899 539 aaPredicted RBP31.62■■■□□ 2.65
HMG20B-205ENST00000435022 PUS7Q96PZ0 661 aaKnown RBP31.62■■■□□ 2.65
HMG20B-205ENST00000435022 BCL9O00512 1426 aa31.61■■■□□ 2.65
HMG20B-205ENST00000435022 CSB-PGBD3P0DP91 1061 aa31.61■■■□□ 2.65
HMG20B-205ENST00000435022 HDGFL2Q7Z4V5 671 aaPredicted RBP31.61■■■□□ 2.65
HMG20B-205ENST00000435022 ERBB3P21860 1342 aa31.59■■■□□ 2.65
HMG20B-205ENST00000435022 CCDC7Q96M83 1385 aa31.58■■■□□ 2.65
HMG20B-205ENST00000435022 C11orf95C9JLR9 678 aaPredicted RBP31.58■■■□□ 2.65
HMG20B-205ENST00000435022 CDCA7Q9BWT1 371 aaPredicted RBP31.58■■■□□ 2.65
HMG20B-205ENST00000435022 TNS2Q63HR2 1409 aa31.58■■■□□ 2.65
HMG20B-205ENST00000435022 TERF2IPQ9NYB0 399 aa31.56■■■□□ 2.64
HMG20B-205ENST00000435022 BCL11BQ9C0K0 894 aaPredicted RBP31.53■■■□□ 2.64
HMG20B-205ENST00000435022 PLSCR1O15162 318 aa31.52■■■□□ 2.64
HMG20B-205ENST00000435022 NINLQ9Y2I6 1382 aa31.52■■■□□ 2.64
HMG20B-205ENST00000435022 PROM2Q8N271 834 aa31.5■■■□□ 2.63
HMG20B-205ENST00000435022 ANO8Q9HCE9 1232 aaPredicted RBP31.5■■■□□ 2.63
HMG20B-205ENST00000435022 NHSQ6T4R5 1651 aa31.49■■■□□ 2.63
HMG20B-205ENST00000435022 ANKRD24Q8TF21 1146 aa31.49■■■□□ 2.63
HMG20B-205ENST00000435022 USP47Q96K76 1375 aa31.48■■■□□ 2.63
HMG20B-205ENST00000435022 EXOC5O00471 708 aa31.48■■■□□ 2.63
HMG20B-205ENST00000435022 NLRP2Q9NX02 1062 aa31.48■■■□□ 2.63
HMG20B-205ENST00000435022 NBPF14Q5TI25 921 aa31.47■■■□□ 2.63
HMG20B-205ENST00000435022 CASZ1Q86V15 1759 aa31.47■■■□□ 2.63
HMG20B-205ENST00000435022 ANKRD36BQ8N2N9 1353 aa31.45■■■□□ 2.63
HMG20B-205ENST00000435022 KCNQ2O43526 872 aa31.44■■■□□ 2.62
HMG20B-205ENST00000435022 FBLN1P23142 703 aa31.44■■■□□ 2.62
HMG20B-205ENST00000435022 FAM208AQ9UK61 1670 aaKnown RBP31.43■■■□□ 2.62
HMG20B-205ENST00000435022 IP6K1Q92551 441 aa31.42■■■□□ 2.62
HMG20B-205ENST00000435022 IL2RBP14784 551 aa31.41■■■□□ 2.62
HMG20B-205ENST00000435022 MAP3K19Q56UN5 1328 aa31.41■■■□□ 2.62
HMG20B-205ENST00000435022 RGPD2P0DJD1 1756 aa31.4■■■□□ 2.62
HMG20B-205ENST00000435022 MYOM1P52179 1685 aa31.39■■■□□ 2.62
HMG20B-205ENST00000435022 PDGFDQ9GZP0 370 aaPredicted RBP31.38■■■□□ 2.61
HMG20B-205ENST00000435022 ACSBG1Q96GR2 724 aa31.37■■■□□ 2.61
HMG20B-205ENST00000435022 BTAF1O14981 1849 aa31.37■■■□□ 2.61
HMG20B-205ENST00000435022 TXNRD1Q16881 649 aa31.36■■■□□ 2.61
HMG20B-205ENST00000435022 COG3Q96JB2 828 aa31.36■■■□□ 2.61
HMG20B-205ENST00000435022 HOXC9P31274 260 aa31.35■■■□□ 2.61
HMG20B-205ENST00000435022 SHANK3Q9BYB0 1731 aa31.35■■■□□ 2.61
HMG20B-205ENST00000435022 PAPPAQ13219 1627 aa31.35■■■□□ 2.61
HMG20B-205ENST00000435022 SLC24A1O60721 1099 aa31.34■■■□□ 2.61
HMG20B-205ENST00000435022 TMF1P82094 1093 aa31.34■■■□□ 2.61
HMG20B-205ENST00000435022 LTV1Q96GA3 475 aaPredicted RBP31.34■■■□□ 2.61
HMG20B-205ENST00000435022 KIF20BQ96Q89 1820 aa31.33■■■□□ 2.61
HMG20B-205ENST00000435022 FYB1O15117 783 aa31.32■■■□□ 2.6
HMG20B-205ENST00000435022 SPON1Q9HCB6 807 aa31.31■■■□□ 2.6
HMG20B-205ENST00000435022 GGNBP2Q9H3C7 697 aa31.3■■■□□ 2.6
HMG20B-205ENST00000435022 MEGF6O75095 1541 aa31.29■■■□□ 2.6
HMG20B-205ENST00000435022 RRS1Q15050 365 aaKnown RBP31.28■■■□□ 2.6
HMG20B-205ENST00000435022 RTL1A6NKG5 1358 aa31.28■■■□□ 2.6
HMG20B-205ENST00000435022 AMPHP49418 695 aa31.26■■■□□ 2.59
HMG20B-205ENST00000435022 DOT1LQ8TEK3 1739 aa31.25■■■□□ 2.59
HMG20B-205ENST00000435022 SLC15A2Q16348 729 aa31.24■■■□□ 2.59
HMG20B-205ENST00000435022 CARD14Q9BXL6 1004 aa31.24■■■□□ 2.59
HMG20B-205ENST00000435022 DDX54Q8TDD1 881 aaKnown RBP31.22■■■□□ 2.59
HMG20B-205ENST00000435022 ZBTB7AO95365 584 aa31.21■■■□□ 2.59
HMG20B-205ENST00000435022 STK32BQ9NY57 414 aa31.21■■■□□ 2.59
HMG20B-205ENST00000435022 NBPF6Q5VWK0 638 aa31.2■■■□□ 2.59
HMG20B-205ENST00000435022 NBPF4Q96M43 638 aa31.2■■■□□ 2.59
HMG20B-205ENST00000435022 LRRC4BQ9NT99 713 aa31.2■■■□□ 2.59
HMG20B-205ENST00000435022 PTGER2P43116 358 aa31.19■■■□□ 2.58
HMG20B-205ENST00000435022 NSD2O96028 1365 aa31.18■■■□□ 2.58
HMG20B-205ENST00000435022 KAT6BQ8WYB5 2073 aa31.18■■■□□ 2.58
HMG20B-205ENST00000435022 NSD3Q9BZ95 1437 aa31.18■■■□□ 2.58
HMG20B-205ENST00000435022 TIMELESSQ9UNS1 1208 aa31.18■■■□□ 2.58
HMG20B-205ENST00000435022 USHBP1Q8N6Y0 703 aa31.17■■■□□ 2.58
HMG20B-205ENST00000435022 PPP1R1BQ9UD71 204 aaPredicted RBP31.17■■■□□ 2.58
HMG20B-205ENST00000435022 CLSPNQ9HAW4 1339 aa31.17■■■□□ 2.58
HMG20B-205ENST00000435022 ZNF827Q17R98 1081 aa31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms