RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 LTV1Q96GA3 475 aaPredicted RBP20.73■□□□□ 0.91
CNOT9-205ENST00000433439 HOXC9P31274 260 aa20.72■□□□□ 0.91
CNOT9-205ENST00000433439 BTG4Q9NY30 223 aa20.72■□□□□ 0.91
CNOT9-205ENST00000433439 COL14A1Q05707 1796 aaKnown RBP20.72■□□□□ 0.91
CNOT9-205ENST00000433439 IP6K1Q92551 441 aa20.71■□□□□ 0.91
CNOT9-205ENST00000433439 STRN4Q9NRL3 753 aa20.71■□□□□ 0.91
CNOT9-205ENST00000433439 AXIN2Q9Y2T1 843 aa20.71■□□□□ 0.91
CNOT9-205ENST00000433439 PEAK1Q9H792 1746 aa20.7■□□□□ 0.9
CNOT9-205ENST00000433439 EVA1CP58658 441 aa20.7■□□□□ 0.9
CNOT9-205ENST00000433439 HSP90AB2PQ58FF8 381 aa20.7■□□□□ 0.9
CNOT9-205ENST00000433439 MYBBP1AQ9BQG0 1328 aaKnown RBP20.7■□□□□ 0.9
CNOT9-205ENST00000433439 FLT4P35916 1363 aa20.7■□□□□ 0.9
CNOT9-205ENST00000433439 RGPD5Q99666 1765 aa20.69■□□□□ 0.9
CNOT9-205ENST00000433439 CSB-PGBD3P0DP91 1061 aa20.69■□□□□ 0.9
CNOT9-205ENST00000433439 UPF1Q92900 1129 aaKnown RBP eCLIP20.69■□□□□ 0.9
CNOT9-205ENST00000433439 PLCH1Q4KWH8 1693 aa20.69■□□□□ 0.9
CNOT9-205ENST00000433439 AFF2P51816 1311 aa20.69■□□□□ 0.9
CNOT9-205ENST00000433439 USP21Q9UK80 565 aa20.68■□□□□ 0.9
CNOT9-205ENST00000433439 RTL1A6NKG5 1358 aa20.68■□□□□ 0.9
CNOT9-205ENST00000433439 CAMTA1Q9Y6Y1 1673 aa20.67■□□□□ 0.9
CNOT9-205ENST00000433439 COL18A1P39060 1754 aa20.67■□□□□ 0.9
CNOT9-205ENST00000433439 ANKRD24Q8TF21 1146 aa20.66■□□□□ 0.9
CNOT9-205ENST00000433439 CFAP53Q96M91 514 aa20.66■□□□□ 0.9
CNOT9-205ENST00000433439 CCDC9Q9Y3X0 531 aaKnown RBP20.66■□□□□ 0.9
CNOT9-205ENST00000433439 LMO7Q8WWI1 1683 aa20.66■□□□□ 0.9
CNOT9-205ENST00000433439 SMG6Q86US8 1419 aaKnown RBP20.65■□□□□ 0.9
CNOT9-205ENST00000433439 KIF24Q5T7B8 1368 aa20.65■□□□□ 0.9
CNOT9-205ENST00000433439 SLIT2O94813 1529 aa20.64■□□□□ 0.9
CNOT9-205ENST00000433439 CDK12Q9NYV4 1490 aaPredicted RBP20.64■□□□□ 0.89
CNOT9-205ENST00000433439 BLMP54132 1417 aaPredicted RBP20.64■□□□□ 0.89
CNOT9-205ENST00000433439 INSRP06213 1382 aa20.64■□□□□ 0.89
CNOT9-205ENST00000433439 FNBP4Q8N3X1 1017 aaPredicted RBP20.64■□□□□ 0.89
CNOT9-205ENST00000433439 COL5A2P05997 1499 aaPredicted RBP20.63■□□□□ 0.89
CNOT9-205ENST00000433439 UNC5CLQ8IV45 518 aa20.63■□□□□ 0.89
CNOT9-205ENST00000433439 LARP1Q6PKG0 1096 aaKnown RBP20.62■□□□□ 0.89
CNOT9-205ENST00000433439 TOM1L2Q6ZVM7 507 aa20.62■□□□□ 0.89
CNOT9-205ENST00000433439 NLRP2Q9NX02 1062 aa20.62■□□□□ 0.89
CNOT9-205ENST00000433439 ABCC6O95255 1503 aa20.62■□□□□ 0.89
CNOT9-205ENST00000433439 NWD2Q9ULI1 1742 aa20.61■□□□□ 0.89
CNOT9-205ENST00000433439 ERBB3P21860 1342 aa20.61■□□□□ 0.89
CNOT9-205ENST00000433439 EIF4A2Q14240 407 aaKnown RBP20.61■□□□□ 0.89
CNOT9-205ENST00000433439 USP35Q9P2H5 1018 aa20.61■□□□□ 0.89
CNOT9-205ENST00000433439 BCL9LQ86UU0 1499 aa20.61■□□□□ 0.89
CNOT9-205ENST00000433439 DIAPH1O60610 1272 aaKnown RBP20.6■□□□□ 0.89
CNOT9-205ENST00000433439 MIER1Q8N108 512 aa20.6■□□□□ 0.89
CNOT9-205ENST00000433439 NRAPQ86VF7 1730 aa20.6■□□□□ 0.89
CNOT9-205ENST00000433439 WDR17Q8IZU2 1322 aa20.59■□□□□ 0.89
CNOT9-205ENST00000433439 U2SURPO15042 1029 aaKnown RBP20.58■□□□□ 0.89
CNOT9-205ENST00000433439 CCDC184Q52MB2 194 aa20.58■□□□□ 0.89
CNOT9-205ENST00000433439 ZNF772Q68DY9 489 aaPredicted RBP20.58■□□□□ 0.89
CNOT9-205ENST00000433439 USHBP1Q8N6Y0 703 aa20.58■□□□□ 0.89
CNOT9-205ENST00000433439 QTRT2Q9H974 415 aaKnown RBP20.57■□□□□ 0.88
CNOT9-205ENST00000433439 MRS2Q9HD23 443 aa20.57■□□□□ 0.88
CNOT9-205ENST00000433439 TRPC5Q9UL62 973 aaPredicted RBP20.57■□□□□ 0.88
CNOT9-205ENST00000433439 IL13P35225 146 aa20.56■□□□□ 0.88
CNOT9-205ENST00000433439 NBPF6Q5VWK0 638 aa20.56■□□□□ 0.88
CNOT9-205ENST00000433439 NBPF4Q96M43 638 aa20.56■□□□□ 0.88
CNOT9-205ENST00000433439 RGPD2P0DJD1 1756 aa20.56■□□□□ 0.88
CNOT9-205ENST00000433439 COL3A1P02461 1466 aaPredicted RBP20.56■□□□□ 0.88
CNOT9-205ENST00000433439 CRB1P82279 1406 aa20.55■□□□□ 0.88
CNOT9-205ENST00000433439 VPS72Q15906 364 aa20.55■□□□□ 0.88
CNOT9-205ENST00000433439 EYA1Q99502 592 aa20.55■□□□□ 0.88
CNOT9-205ENST00000433439 NUDCQ9Y266 331 aa20.55■□□□□ 0.88
CNOT9-205ENST00000433439 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.54■□□□□ 0.88
CNOT9-205ENST00000433439 SPATA31A5Q5VU36 1347 aa20.53■□□□□ 0.88
CNOT9-205ENST00000433439 SPATA31A7Q8IWB4 1347 aa20.53■□□□□ 0.88
CNOT9-205ENST00000433439 HMOX1P09601 288 aa20.52■□□□□ 0.88
CNOT9-205ENST00000433439 U2AF1L5P0DN76 240 aaPredicted RBP20.52■□□□□ 0.88
CNOT9-205ENST00000433439 U2AF1Q01081 240 aaKnown RBP eCLIP20.52■□□□□ 0.88
CNOT9-205ENST00000433439 CARD10Q9BWT7 1032 aa20.52■□□□□ 0.88
CNOT9-205ENST00000433439 ATRNO75882 1429 aa20.52■□□□□ 0.87
CNOT9-205ENST00000433439 SPATA31A1Q5TZJ5 1347 aa20.52■□□□□ 0.87
CNOT9-205ENST00000433439 FAM208AQ9UK61 1670 aaKnown RBP20.51■□□□□ 0.87
CNOT9-205ENST00000433439 A0A0G2JS52 829 aa20.51■□□□□ 0.87
CNOT9-205ENST00000433439 MYT1Q01538 1121 aa20.51■□□□□ 0.87
CNOT9-205ENST00000433439 GJD4Q96KN9 370 aaPredicted RBP20.51■□□□□ 0.87
CNOT9-205ENST00000433439 WDR43Q15061 677 aaKnown RBP eCLIP20.5■□□□□ 0.87
CNOT9-205ENST00000433439 SULT6B1Q6IMI4 303 aa20.5■□□□□ 0.87
CNOT9-205ENST00000433439 TCP11L2Q8N4U5 519 aa20.5■□□□□ 0.87
CNOT9-205ENST00000433439 FAM98CQ17RN3 349 aaKnown RBP20.49■□□□□ 0.87
CNOT9-205ENST00000433439 AEBP1Q8IUX7 1158 aa20.49■□□□□ 0.87
CNOT9-205ENST00000433439 IGSF1Q8N6C5 1336 aa20.49■□□□□ 0.87
CNOT9-205ENST00000433439 CCER2I3L3R5 266 aa20.46■□□□□ 0.87
CNOT9-205ENST00000433439 RBM6P78332 1123 aaKnown RBP20.46■□□□□ 0.87
CNOT9-205ENST00000433439 RAPGEF4Q8WZA2 1011 aa20.46■□□□□ 0.87
CNOT9-205ENST00000433439 GLI3P10071 1580 aa20.46■□□□□ 0.87
CNOT9-205ENST00000433439 RGPD1P0DJD0 1748 aa20.45■□□□□ 0.86
CNOT9-205ENST00000433439 RXRBP28702 533 aa20.45■□□□□ 0.86
CNOT9-205ENST00000433439 THRAP3Q9Y2W1 955 aaKnown RBP20.45■□□□□ 0.86
CNOT9-205ENST00000433439 IL2RBP14784 551 aa20.44■□□□□ 0.86
CNOT9-205ENST00000433439 TATP17735 454 aaPredicted RBP20.44■□□□□ 0.86
CNOT9-205ENST00000433439 FAM9BQ8IZU0 186 aa20.44■□□□□ 0.86
CNOT9-205ENST00000433439 PRKAR2BP31323 418 aa20.42■□□□□ 0.86
CNOT9-205ENST00000433439 BARGINQ6ZT62 677 aa20.42■□□□□ 0.86
CNOT9-205ENST00000433439 ADAMTS8Q9UP79 889 aa20.42■□□□□ 0.86
CNOT9-205ENST00000433439 PNISRQ8TF01 805 aaKnown RBP20.41■□□□□ 0.86
CNOT9-205ENST00000433439 MEGF6O75095 1541 aa20.41■□□□□ 0.86
CNOT9-205ENST00000433439 NCAPD2Q15021 1401 aa20.4■□□□□ 0.86
CNOT9-205ENST00000433439 CCDC146Q8IYE0 955 aa20.4■□□□□ 0.86
CNOT9-205ENST00000433439 RSPH6AQ9H0K4 717 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms