RNA–Protein interactions for RNA: ENST00000430374.5

SMARCAL1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-207ENST00000430374 PLCH1Q4KWH8 1693 aa12.98□□□□□ -0.33
SMARCAL1-207ENST00000430374 BLMP54132 1417 aaPredicted RBP12.97□□□□□ -0.33
SMARCAL1-207ENST00000430374 RXRBP28702 533 aa12.97□□□□□ -0.33
SMARCAL1-207ENST00000430374 RRS1Q15050 365 aaKnown RBP12.97□□□□□ -0.33
SMARCAL1-207ENST00000430374 KIF20BQ96Q89 1820 aa12.97□□□□□ -0.33
SMARCAL1-207ENST00000430374 NRAPQ86VF7 1730 aa12.96□□□□□ -0.33
SMARCAL1-207ENST00000430374 ERBB3P21860 1342 aa12.96□□□□□ -0.33
SMARCAL1-207ENST00000430374 SPATA31A5Q5VU36 1347 aa12.96□□□□□ -0.33
SMARCAL1-207ENST00000430374 SPATA31A7Q8IWB4 1347 aa12.96□□□□□ -0.33
SMARCAL1-207ENST00000430374 ZBTB7CA1YPR0 619 aa12.96□□□□□ -0.33
SMARCAL1-207ENST00000430374 HOXC9P31274 260 aa12.96□□□□□ -0.33
SMARCAL1-207ENST00000430374 EVA1CP58658 441 aa12.96□□□□□ -0.33
SMARCAL1-207ENST00000430374 LARP1Q6PKG0 1096 aaKnown RBP12.96□□□□□ -0.33
SMARCAL1-207ENST00000430374 MORC1Q86VD1 984 aa12.96□□□□□ -0.33
SMARCAL1-207ENST00000430374 STRN4Q9NRL3 753 aa12.96□□□□□ -0.33
SMARCAL1-207ENST00000430374 COL18A1P39060 1754 aa12.96□□□□□ -0.34
SMARCAL1-207ENST00000430374 CDK12Q9NYV4 1490 aaPredicted RBP12.96□□□□□ -0.34
SMARCAL1-207ENST00000430374 SPATA31A1Q5TZJ5 1347 aa12.95□□□□□ -0.34
SMARCAL1-207ENST00000430374 WDR17Q8IZU2 1322 aa12.95□□□□□ -0.34
SMARCAL1-207ENST00000430374 ZNF316A6NFI3 1004 aaPredicted RBP12.95□□□□□ -0.34
SMARCAL1-207ENST00000430374 ONECUT3O60422 494 aaPredicted RBP12.95□□□□□ -0.34
SMARCAL1-207ENST00000430374 AMPHP49418 695 aa12.95□□□□□ -0.34
SMARCAL1-207ENST00000430374 POLKQ9UBT6 870 aa12.95□□□□□ -0.34
SMARCAL1-207ENST00000430374 SMG6Q86US8 1419 aaKnown RBP12.95□□□□□ -0.34
SMARCAL1-207ENST00000430374 FLT4P35916 1363 aa12.94□□□□□ -0.34
SMARCAL1-207ENST00000430374 CC2D1BQ5T0F9 858 aaKnown RBP12.94□□□□□ -0.34
SMARCAL1-207ENST00000430374 CRB1P82279 1406 aa12.94□□□□□ -0.34
SMARCAL1-207ENST00000430374 DDX10Q13206 875 aaKnown RBP12.93□□□□□ -0.34
SMARCAL1-207ENST00000430374 ILDR2Q71H61 639 aa12.93□□□□□ -0.34
SMARCAL1-207ENST00000430374 EMILIN1Q9Y6C2 1016 aa12.93□□□□□ -0.34
SMARCAL1-207ENST00000430374 GLI3P10071 1580 aa12.93□□□□□ -0.34
SMARCAL1-207ENST00000430374 INSRP06213 1382 aa12.93□□□□□ -0.34
SMARCAL1-207ENST00000430374 RGS12O14924 1447 aa12.92□□□□□ -0.34
SMARCAL1-207ENST00000430374 TNNT2P45379 298 aaPredicted RBP12.92□□□□□ -0.34
SMARCAL1-207ENST00000430374 HSP90AB2PQ58FF8 381 aa12.92□□□□□ -0.34
SMARCAL1-207ENST00000430374 BARGINQ6ZT62 677 aa12.92□□□□□ -0.34
SMARCAL1-207ENST00000430374 TCP11L2Q8N4U5 519 aa12.92□□□□□ -0.34
SMARCAL1-207ENST00000430374 ANKRD24Q8TF21 1146 aa12.92□□□□□ -0.34
SMARCAL1-207ENST00000430374 ANKRD26Q9UPS8 1709 aa12.92□□□□□ -0.34
SMARCAL1-207ENST00000430374 THRAP3Q9Y2W1 955 aaKnown RBP12.92□□□□□ -0.34
SMARCAL1-207ENST00000430374 CCDC9Q9Y3X0 531 aaKnown RBP12.92□□□□□ -0.34
SMARCAL1-207ENST00000430374 TOM1L2Q6ZVM7 507 aa12.91□□□□□ -0.34
SMARCAL1-207ENST00000430374 CARD10Q9BWT7 1032 aa12.91□□□□□ -0.34
SMARCAL1-207ENST00000430374 CSB-PGBD3P0DP91 1061 aa12.9□□□□□ -0.34
SMARCAL1-207ENST00000430374 LTN1O94822 1766 aa12.89□□□□□ -0.35
SMARCAL1-207ENST00000430374 PEAK1Q9H792 1746 aa12.89□□□□□ -0.35
SMARCAL1-207ENST00000430374 PPM1GO15355 546 aaPredicted RBP12.89□□□□□ -0.35
SMARCAL1-207ENST00000430374 FAM98CQ17RN3 349 aaKnown RBP12.89□□□□□ -0.35
SMARCAL1-207ENST00000430374 USP35Q9P2H5 1018 aa12.89□□□□□ -0.35
SMARCAL1-207ENST00000430374 PARD3Q8TEW0 1356 aa12.88□□□□□ -0.35
SMARCAL1-207ENST00000430374 MTHFSP49914 203 aa12.87□□□□□ -0.35
SMARCAL1-207ENST00000430374 SEPT12Q8IYM1 358 aa12.87□□□□□ -0.35
SMARCAL1-207ENST00000430374 LTV1Q96GA3 475 aaPredicted RBP12.87□□□□□ -0.35
SMARCAL1-207ENST00000430374 CDCA7Q9BWT1 371 aaPredicted RBP12.87□□□□□ -0.35
SMARCAL1-207ENST00000430374 NLRP2Q9NX02 1062 aa12.87□□□□□ -0.35
SMARCAL1-207ENST00000430374 DISP2A7MBM2 1401 aa12.87□□□□□ -0.35
SMARCAL1-207ENST00000430374 NBPF6Q5VWK0 638 aa12.86□□□□□ -0.35
SMARCAL1-207ENST00000430374 NBPF4Q96M43 638 aa12.86□□□□□ -0.35
SMARCAL1-207ENST00000430374 EP400Q96L91 3159 aa12.86□□□□□ -0.35
SMARCAL1-207ENST00000430374 NCAPD2Q15021 1401 aa12.86□□□□□ -0.35
SMARCAL1-207ENST00000430374 THSD7AQ9UPZ6 1657 aa12.86□□□□□ -0.35
SMARCAL1-207ENST00000430374 EIF4A2Q14240 407 aaKnown RBP12.85□□□□□ -0.35
SMARCAL1-207ENST00000430374 PPP2R1AP30153 589 aa12.84□□□□□ -0.35
SMARCAL1-207ENST00000430374 CNGB1Q14028 1251 aaPredicted RBP12.84□□□□□ -0.35
SMARCAL1-207ENST00000430374 RALBP1Q15311 655 aa12.84□□□□□ -0.35
SMARCAL1-207ENST00000430374 IL2RBP14784 551 aa12.83□□□□□ -0.36
SMARCAL1-207ENST00000430374 IL13P35225 146 aa12.83□□□□□ -0.36
SMARCAL1-207ENST00000430374 EYA1Q99502 592 aa12.83□□□□□ -0.36
SMARCAL1-207ENST00000430374 IGSF1Q8N6C5 1336 aa12.83□□□□□ -0.36
SMARCAL1-207ENST00000430374 FAM208AQ9UK61 1670 aaKnown RBP12.83□□□□□ -0.36
SMARCAL1-207ENST00000430374 RGPD5Q99666 1765 aa12.82□□□□□ -0.36
SMARCAL1-207ENST00000430374 A0A0G2JS52 829 aa12.82□□□□□ -0.36
SMARCAL1-207ENST00000430374 MYT1Q01538 1121 aa12.82□□□□□ -0.36
SMARCAL1-207ENST00000430374 KRT27Q7Z3Y8 459 aa12.82□□□□□ -0.36
SMARCAL1-207ENST00000430374 COL3A1P02461 1466 aaPredicted RBP12.82□□□□□ -0.36
SMARCAL1-207ENST00000430374 PLEKHG2Q9H7P9 1386 aa12.81□□□□□ -0.36
SMARCAL1-207ENST00000430374 DDB1Q16531 1140 aa12.8□□□□□ -0.36
SMARCAL1-207ENST00000430374 USHBP1Q8N6Y0 703 aa12.8□□□□□ -0.36
SMARCAL1-207ENST00000430374 PRKRIP1Q9H875 184 aaPredicted RBP12.8□□□□□ -0.36
SMARCAL1-207ENST00000430374 MAP2P11137 1827 aaKnown RBP12.8□□□□□ -0.36
SMARCAL1-207ENST00000430374 OVOS2A0A0G2JMS6 1433 aa12.79□□□□□ -0.36
SMARCAL1-207ENST00000430374 TNS2Q63HR2 1409 aa12.79□□□□□ -0.36
SMARCAL1-207ENST00000430374 MEGF6O75095 1541 aa12.79□□□□□ -0.36
SMARCAL1-207ENST00000430374 DIAPH1O60610 1272 aaKnown RBP12.79□□□□□ -0.36
SMARCAL1-207ENST00000430374 CFAP53Q96M91 514 aa12.79□□□□□ -0.36
SMARCAL1-207ENST00000430374 KDRP35968 1356 aa12.79□□□□□ -0.36
SMARCAL1-207ENST00000430374 PARP4Q9UKK3 1724 aaKnown RBP12.79□□□□□ -0.36
SMARCAL1-207ENST00000430374 EXOC5O00471 708 aa12.78□□□□□ -0.36
SMARCAL1-207ENST00000430374 PDE3BQ13370 1112 aa12.78□□□□□ -0.36
SMARCAL1-207ENST00000430374 RAPGEF4Q8WZA2 1011 aa12.78□□□□□ -0.36
SMARCAL1-207ENST00000430374 MYBBP1AQ9BQG0 1328 aaKnown RBP12.78□□□□□ -0.36
SMARCAL1-207ENST00000430374 BCL9O00512 1426 aa12.78□□□□□ -0.36
SMARCAL1-207ENST00000430374 LRRC37A3O60309 1634 aa12.77□□□□□ -0.36
SMARCAL1-207ENST00000430374 SOCS7O14512 581 aa12.77□□□□□ -0.37
SMARCAL1-207ENST00000430374 TATP17735 454 aaPredicted RBP12.76□□□□□ -0.37
SMARCAL1-207ENST00000430374 MARCH10Q8NA82 808 aaPredicted RBP12.76□□□□□ -0.37
SMARCAL1-207ENST00000430374 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.76□□□□□ -0.372e-6■□□□□ 9.5
SMARCAL1-207ENST00000430374 RGPD1P0DJD0 1748 aa12.75□□□□□ -0.37
SMARCAL1-207ENST00000430374 SULT6B1Q6IMI4 303 aa12.75□□□□□ -0.37
SMARCAL1-207ENST00000430374 FAM196AQ6ZSG2 479 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms