RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 COL5A2P05997 1499 aaPredicted RBP27.47■■□□□ 1.99
CSNK1E-207ENST00000430335 EVA1CP58658 441 aa27.47■■□□□ 1.99
CSNK1E-207ENST00000430335 NPC1L1Q9UHC9 1359 aa27.47■■□□□ 1.99
CSNK1E-207ENST00000430335 FBLN1P23142 703 aa27.46■■□□□ 1.99
CSNK1E-207ENST00000430335 STRN4Q9NRL3 753 aa27.46■■□□□ 1.99
CSNK1E-207ENST00000430335 ANKRD26Q9UPS8 1709 aa27.45■■□□□ 1.99
CSNK1E-207ENST00000430335 IP6K1Q92551 441 aa27.45■■□□□ 1.98
CSNK1E-207ENST00000430335 ILDR2Q71H61 639 aa27.44■■□□□ 1.98
CSNK1E-207ENST00000430335 CDK12Q9NYV4 1490 aaPredicted RBP27.44■■□□□ 1.98
CSNK1E-207ENST00000430335 SPATA31A5Q5VU36 1347 aa27.43■■□□□ 1.98
CSNK1E-207ENST00000430335 SPATA31A7Q8IWB4 1347 aa27.43■■□□□ 1.98
CSNK1E-207ENST00000430335 LTN1O94822 1766 aa27.43■■□□□ 1.98
CSNK1E-207ENST00000430335 RRS1Q15050 365 aaKnown RBP27.43■■□□□ 1.98
CSNK1E-207ENST00000430335 CCDC9Q9Y3X0 531 aaKnown RBP27.43■■□□□ 1.98
CSNK1E-207ENST00000430335 RTL1A6NKG5 1358 aa27.43■■□□□ 1.98
CSNK1E-207ENST00000430335 KIF24Q5T7B8 1368 aa27.43■■□□□ 1.98
CSNK1E-207ENST00000430335 BLMP54132 1417 aaPredicted RBP27.42■■□□□ 1.98
CSNK1E-207ENST00000430335 MORC1Q86VD1 984 aa27.42■■□□□ 1.98
CSNK1E-207ENST00000430335 GLI3P10071 1580 aa27.41■■□□□ 1.98
CSNK1E-207ENST00000430335 AMPHP49418 695 aa27.41■■□□□ 1.98
CSNK1E-207ENST00000430335 LARP1Q6PKG0 1096 aaKnown RBP27.41■■□□□ 1.98
CSNK1E-207ENST00000430335 HOXC9P31274 260 aa27.4■■□□□ 1.98
CSNK1E-207ENST00000430335 SPATA31A1Q5TZJ5 1347 aa27.4■■□□□ 1.98
CSNK1E-207ENST00000430335 WDR17Q8IZU2 1322 aa27.4■■□□□ 1.98
CSNK1E-207ENST00000430335 ERBB3P21860 1342 aa27.39■■□□□ 1.97
CSNK1E-207ENST00000430335 CRB1P82279 1406 aa27.38■■□□□ 1.97
CSNK1E-207ENST00000430335 ONECUT3O60422 494 aaPredicted RBP27.37■■□□□ 1.97
CSNK1E-207ENST00000430335 FLT4P35916 1363 aa27.36■■□□□ 1.97
CSNK1E-207ENST00000430335 CC2D1BQ5T0F9 858 aaKnown RBP27.36■■□□□ 1.97
CSNK1E-207ENST00000430335 POLKQ9UBT6 870 aa27.36■■□□□ 1.97
CSNK1E-207ENST00000430335 EMILIN1Q9Y6C2 1016 aa27.36■■□□□ 1.97
CSNK1E-207ENST00000430335 RGS12O14924 1447 aa27.35■■□□□ 1.97
CSNK1E-207ENST00000430335 ZNF316A6NFI3 1004 aaPredicted RBP27.35■■□□□ 1.97
CSNK1E-207ENST00000430335 TNNT2P45379 298 aaPredicted RBP27.35■■□□□ 1.97
CSNK1E-207ENST00000430335 ANKRD24Q8TF21 1146 aa27.35■■□□□ 1.97
CSNK1E-207ENST00000430335 RGPD5Q99666 1765 aa27.35■■□□□ 1.97
CSNK1E-207ENST00000430335 CSB-PGBD3P0DP91 1061 aa27.34■■□□□ 1.97
CSNK1E-207ENST00000430335 TOM1L2Q6ZVM7 507 aa27.34■■□□□ 1.97
CSNK1E-207ENST00000430335 THRAP3Q9Y2W1 955 aaKnown RBP27.34■■□□□ 1.97
CSNK1E-207ENST00000430335 DDX10Q13206 875 aaKnown RBP27.33■■□□□ 1.97
CSNK1E-207ENST00000430335 TCP11L2Q8N4U5 519 aa27.33■■□□□ 1.97
CSNK1E-207ENST00000430335 CARD10Q9BWT7 1032 aa27.33■■□□□ 1.97
CSNK1E-207ENST00000430335 INSRP06213 1382 aa27.33■■□□□ 1.97
CSNK1E-207ENST00000430335 BARGINQ6ZT62 677 aa27.32■■□□□ 1.96
CSNK1E-207ENST00000430335 PEAK1Q9H792 1746 aa27.32■■□□□ 1.96
CSNK1E-207ENST00000430335 SMG6Q86US8 1419 aaKnown RBP27.32■■□□□ 1.96
CSNK1E-207ENST00000430335 FAM98CQ17RN3 349 aaKnown RBP27.31■■□□□ 1.96
CSNK1E-207ENST00000430335 HSP90AB2PQ58FF8 381 aa27.3■■□□□ 1.96
CSNK1E-207ENST00000430335 USP35Q9P2H5 1018 aa27.3■■□□□ 1.96
CSNK1E-207ENST00000430335 MAP2P11137 1827 aaKnown RBP27.3■■□□□ 1.96
CSNK1E-207ENST00000430335 PPM1GO15355 546 aaPredicted RBP27.29■■□□□ 1.96
CSNK1E-207ENST00000430335 SEPT12Q8IYM1 358 aa27.28■■□□□ 1.96
CSNK1E-207ENST00000430335 LTV1Q96GA3 475 aaPredicted RBP27.27■■□□□ 1.96
CSNK1E-207ENST00000430335 NLRP2Q9NX02 1062 aa27.26■■□□□ 1.95
CSNK1E-207ENST00000430335 FAM208AQ9UK61 1670 aaKnown RBP27.24■■□□□ 1.95
CSNK1E-207ENST00000430335 THSD7AQ9UPZ6 1657 aa27.24■■□□□ 1.95
CSNK1E-207ENST00000430335 CNGB1Q14028 1251 aaPredicted RBP27.23■■□□□ 1.95
CSNK1E-207ENST00000430335 CDCA7Q9BWT1 371 aaPredicted RBP27.22■■□□□ 1.95
CSNK1E-207ENST00000430335 A0A0G2JS52 829 aa27.21■■□□□ 1.95
CSNK1E-207ENST00000430335 MYT1Q01538 1121 aa27.21■■□□□ 1.95
CSNK1E-207ENST00000430335 DISP2A7MBM2 1401 aa27.2■■□□□ 1.94
CSNK1E-207ENST00000430335 MTHFSP49914 203 aa27.2■■□□□ 1.94
CSNK1E-207ENST00000430335 NBPF6Q5VWK0 638 aa27.18■■□□□ 1.94
CSNK1E-207ENST00000430335 NBPF4Q96M43 638 aa27.18■■□□□ 1.94
CSNK1E-207ENST00000430335 PARD3Q8TEW0 1356 aa27.18■■□□□ 1.94
CSNK1E-207ENST00000430335 EIF4A2Q14240 407 aaKnown RBP27.17■■□□□ 1.94
CSNK1E-207ENST00000430335 KRT27Q7Z3Y8 459 aa27.16■■□□□ 1.94
CSNK1E-207ENST00000430335 PARP4Q9UKK3 1724 aaKnown RBP27.14■■□□□ 1.94
CSNK1E-207ENST00000430335 IL2RBP14784 551 aa27.14■■□□□ 1.94
CSNK1E-207ENST00000430335 PPP2R1AP30153 589 aa27.14■■□□□ 1.94
CSNK1E-207ENST00000430335 NCAPD2Q15021 1401 aa27.14■■□□□ 1.93
CSNK1E-207ENST00000430335 WNK3Q9BYP7 1800 aa27.13■■□□□ 1.93
CSNK1E-207ENST00000430335 BRWD3Q6RI45 1802 aa27.12■■□□□ 1.93
CSNK1E-207ENST00000430335 RALBP1Q15311 655 aa27.12■■□□□ 1.93
CSNK1E-207ENST00000430335 EYA1Q99502 592 aa27.12■■□□□ 1.93
CSNK1E-207ENST00000430335 DDB1Q16531 1140 aa27.11■■□□□ 1.93
CSNK1E-207ENST00000430335 RGPD2P0DJD1 1756 aa27.1■■□□□ 1.93
CSNK1E-207ENST00000430335 SOCS7O14512 581 aa27.1■■□□□ 1.93
CSNK1E-207ENST00000430335 IL13P35225 146 aa27.1■■□□□ 1.93
CSNK1E-207ENST00000430335 PDE3BQ13370 1112 aa27.1■■□□□ 1.93
CSNK1E-207ENST00000430335 USHBP1Q8N6Y0 703 aa27.1■■□□□ 1.93
CSNK1E-207ENST00000430335 IGSF1Q8N6C5 1336 aa27.09■■□□□ 1.93
CSNK1E-207ENST00000430335 EXOC5O00471 708 aa27.08■■□□□ 1.93
CSNK1E-207ENST00000430335 LRRC37A3O60309 1634 aa27.08■■□□□ 1.93
CSNK1E-207ENST00000430335 TNS2Q63HR2 1409 aa27.07■■□□□ 1.92
CSNK1E-207ENST00000430335 RAPGEF4Q8WZA2 1011 aa27.06■■□□□ 1.92
CSNK1E-207ENST00000430335 COL3A1P02461 1466 aaPredicted RBP27.06■■□□□ 1.92
CSNK1E-207ENST00000430335 DIAPH1O60610 1272 aaKnown RBP27.05■■□□□ 1.92
CSNK1E-207ENST00000430335 CFAP53Q96M91 514 aa27.05■■□□□ 1.92
CSNK1E-207ENST00000430335 OVOS2A0A0G2JMS6 1433 aa27.05■■□□□ 1.92
CSNK1E-207ENST00000430335 MEGF6O75095 1541 aa27.05■■□□□ 1.92
CSNK1E-207ENST00000430335 TATP17735 454 aaPredicted RBP27.03■■□□□ 1.92
CSNK1E-207ENST00000430335 PRKRIP1Q9H875 184 aaPredicted RBP27.02■■□□□ 1.92
CSNK1E-207ENST00000430335 PLEKHG2Q9H7P9 1386 aa27.01■■□□□ 1.91
CSNK1E-207ENST00000430335 FAM196AQ6ZSG2 479 aa27.01■■□□□ 1.91
CSNK1E-207ENST00000430335 MYBBP1AQ9BQG0 1328 aaKnown RBP27■■□□□ 1.91
CSNK1E-207ENST00000430335 RGPD1P0DJD0 1748 aa27■■□□□ 1.91
CSNK1E-207ENST00000430335 FAM182BQ5T319 152 aa27■■□□□ 1.91
CSNK1E-207ENST00000430335 MARCH10Q8NA82 808 aaPredicted RBP27■■□□□ 1.91
CSNK1E-207ENST00000430335 KDRP35968 1356 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms