RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 PDE3BQ13370 1112 aa24.29■■□□□ 1.48
CPSF4-203ENST00000430038 NME9Q86XW9 330 aa24.29■■□□□ 1.48
CPSF4-203ENST00000430038 PEAK1Q9H792 1746 aa24.28■■□□□ 1.48
CPSF4-203ENST00000430038 WNK3Q9BYP7 1800 aa24.27■■□□□ 1.48
CPSF4-203ENST00000430038 TMC1Q8TDI8 760 aa24.27■■□□□ 1.48
CPSF4-203ENST00000430038 LRRC37A3O60309 1634 aa24.26■■□□□ 1.47
CPSF4-203ENST00000430038 ST20-MTHFSA0A0A6YYL1 179 aa24.26■■□□□ 1.47
CPSF4-203ENST00000430038 USP54Q70EL1 1684 aa24.26■■□□□ 1.47
CPSF4-203ENST00000430038 WDR17Q8IZU2 1322 aa24.26■■□□□ 1.47
CPSF4-203ENST00000430038 SBF2Q86WG5 1849 aa24.26■■□□□ 1.47
CPSF4-203ENST00000430038 APBA3O96018 575 aa24.25■■□□□ 1.47
CPSF4-203ENST00000430038 TOM1L2Q6ZVM7 507 aa24.25■■□□□ 1.47
CPSF4-203ENST00000430038 KCNH5Q8NCM2 988 aa24.25■■□□□ 1.47
CPSF4-203ENST00000430038 USP31Q70CQ4 1352 aa24.25■■□□□ 1.47
CPSF4-203ENST00000430038 PTF1AQ7RTS3 328 aa24.23■■□□□ 1.47
CPSF4-203ENST00000430038 A0A1W2PP64 1363 aa24.23■■□□□ 1.47
CPSF4-203ENST00000430038 LTN1O94822 1766 aa24.22■■□□□ 1.47
CPSF4-203ENST00000430038 RREB1Q92766 1687 aa24.21■■□□□ 1.47
CPSF4-203ENST00000430038 R3HDM1Q15032 1099 aaKnown RBP24.21■■□□□ 1.47
CPSF4-203ENST00000430038 NUP188Q5SRE5 1749 aa24.19■■□□□ 1.46
CPSF4-203ENST00000430038 MARCH10Q8NA82 808 aaPredicted RBP24.19■■□□□ 1.46
CPSF4-203ENST00000430038 PUS7Q96PZ0 661 aaKnown RBP24.19■■□□□ 1.46
CPSF4-203ENST00000430038 CARD10Q9BWT7 1032 aa24.18■■□□□ 1.46
CPSF4-203ENST00000430038 EDC4Q6P2E9 1401 aaKnown RBP24.18■■□□□ 1.46
CPSF4-203ENST00000430038 LRP5O75197 1615 aa24.17■■□□□ 1.46
CPSF4-203ENST00000430038 DDB1Q16531 1140 aa24.17■■□□□ 1.46
CPSF4-203ENST00000430038 HDGFL2Q7Z4V5 671 aaPredicted RBP24.17■■□□□ 1.46
CPSF4-203ENST00000430038 CSB-PGBD3P0DP91 1061 aa24.15■■□□□ 1.46
CPSF4-203ENST00000430038 FBLN1P23142 703 aa24.15■■□□□ 1.46
CPSF4-203ENST00000430038 OVOS2A0A0J9YW53 1432 aa24.15■■□□□ 1.46
CPSF4-203ENST00000430038 OVOS2Q6IE36 1432 aa24.15■■□□□ 1.46
CPSF4-203ENST00000430038 OVOS2A0A0G2JMS6 1433 aa24.14■■□□□ 1.45
CPSF4-203ENST00000430038 TERF2IPQ9NYB0 399 aa24.14■■□□□ 1.45
CPSF4-203ENST00000430038 ABCC6O95255 1503 aa24.13■■□□□ 1.45
CPSF4-203ENST00000430038 ERBB3P21860 1342 aa24.11■■□□□ 1.45
CPSF4-203ENST00000430038 PARD3Q8TEW0 1356 aa24.1■■□□□ 1.45
CPSF4-203ENST00000430038 USP47Q96K76 1375 aa24.09■■□□□ 1.45
CPSF4-203ENST00000430038 PROM2Q8N271 834 aa24.08■■□□□ 1.45
CPSF4-203ENST00000430038 ANKRD24Q8TF21 1146 aa24.08■■□□□ 1.45
CPSF4-203ENST00000430038 CDCA7Q9BWT1 371 aaPredicted RBP24.08■■□□□ 1.45
CPSF4-203ENST00000430038 CCDC7Q96M83 1385 aa24.07■■□□□ 1.44
CPSF4-203ENST00000430038 EXOC5O00471 708 aa24.06■■□□□ 1.44
CPSF4-203ENST00000430038 BCL11BQ9C0K0 894 aaPredicted RBP24.06■■□□□ 1.44
CPSF4-203ENST00000430038 NLRP2Q9NX02 1062 aa24.06■■□□□ 1.44
CPSF4-203ENST00000430038 BCL9O00512 1426 aa24.06■■□□□ 1.44
CPSF4-203ENST00000430038 RGPD2P0DJD1 1756 aa24.06■■□□□ 1.44
CPSF4-203ENST00000430038 PLSCR1O15162 318 aa24.05■■□□□ 1.44
CPSF4-203ENST00000430038 NINLQ9Y2I6 1382 aa24.04■■□□□ 1.44
CPSF4-203ENST00000430038 RGPD3A6NKT7 1758 aaPredicted RBP24.04■■□□□ 1.44
CPSF4-203ENST00000430038 RGPD4Q7Z3J3 1758 aa24.04■■□□□ 1.44
CPSF4-203ENST00000430038 KCNQ2O43526 872 aa24.04■■□□□ 1.44
CPSF4-203ENST00000430038 IP6K1Q92551 441 aa24.04■■□□□ 1.44
CPSF4-203ENST00000430038 ANKRD36BQ8N2N9 1353 aa24.03■■□□□ 1.44
CPSF4-203ENST00000430038 C11orf95C9JLR9 678 aaPredicted RBP24.03■■□□□ 1.44
CPSF4-203ENST00000430038 PCGF6Q9BYE7 350 aa24.03■■□□□ 1.44
CPSF4-203ENST00000430038 TNS2Q63HR2 1409 aa24.02■■□□□ 1.44
CPSF4-203ENST00000430038 ANO8Q9HCE9 1232 aaPredicted RBP24.02■■□□□ 1.44
CPSF4-203ENST00000430038 KAT6BQ8WYB5 2073 aa24.02■■□□□ 1.44
CPSF4-203ENST00000430038 MAP3K19Q56UN5 1328 aa24.02■■□□□ 1.44
CPSF4-203ENST00000430038 FYB1O15117 783 aa24.01■■□□□ 1.43
CPSF4-203ENST00000430038 TMF1P82094 1093 aa24.01■■□□□ 1.43
CPSF4-203ENST00000430038 LTV1Q96GA3 475 aaPredicted RBP24■■□□□ 1.43
CPSF4-203ENST00000430038 MYOM1P52179 1685 aa23.99■■□□□ 1.43
CPSF4-203ENST00000430038 IL2RBP14784 551 aa23.99■■□□□ 1.43
CPSF4-203ENST00000430038 COG3Q96JB2 828 aa23.99■■□□□ 1.43
CPSF4-203ENST00000430038 GGNBP2Q9H3C7 697 aa23.99■■□□□ 1.43
CPSF4-203ENST00000430038 SLC24A1O60721 1099 aa23.98■■□□□ 1.43
CPSF4-203ENST00000430038 ACSBG1Q96GR2 724 aa23.98■■□□□ 1.43
CPSF4-203ENST00000430038 CARD14Q9BXL6 1004 aa23.98■■□□□ 1.43
CPSF4-203ENST00000430038 PDGFDQ9GZP0 370 aaPredicted RBP23.98■■□□□ 1.43
CPSF4-203ENST00000430038 HOXC9P31274 260 aa23.97■■□□□ 1.43
CPSF4-203ENST00000430038 NBPF14Q5TI25 921 aa23.97■■□□□ 1.43
CPSF4-203ENST00000430038 NHSQ6T4R5 1651 aa23.96■■□□□ 1.43
CPSF4-203ENST00000430038 FAM208AQ9UK61 1670 aaKnown RBP23.96■■□□□ 1.43
CPSF4-203ENST00000430038 RRS1Q15050 365 aaKnown RBP23.96■■□□□ 1.43
CPSF4-203ENST00000430038 BTAF1O14981 1849 aa23.94■■□□□ 1.42
CPSF4-203ENST00000430038 KIF20BQ96Q89 1820 aa23.94■■□□□ 1.42
CPSF4-203ENST00000430038 TXNRD1Q16881 649 aa23.93■■□□□ 1.42
CPSF4-203ENST00000430038 TIMELESSQ9UNS1 1208 aa23.93■■□□□ 1.42
CPSF4-203ENST00000430038 CASZ1Q86V15 1759 aa23.93■■□□□ 1.42
CPSF4-203ENST00000430038 SHANK3Q9BYB0 1731 aa23.93■■□□□ 1.42
CPSF4-203ENST00000430038 AMPHP49418 695 aa23.91■■□□□ 1.42
CPSF4-203ENST00000430038 CLSPNQ9HAW4 1339 aa23.89■■□□□ 1.42
CPSF4-203ENST00000430038 NBPF6Q5VWK0 638 aa23.89■■□□□ 1.41
CPSF4-203ENST00000430038 NBPF4Q96M43 638 aa23.89■■□□□ 1.41
CPSF4-203ENST00000430038 DDX54Q8TDD1 881 aaKnown RBP23.88■■□□□ 1.41
CPSF4-203ENST00000430038 MEGF6O75095 1541 aa23.87■■□□□ 1.41
CPSF4-203ENST00000430038 HSP90AB2PQ58FF8 381 aa23.86■■□□□ 1.41
CPSF4-203ENST00000430038 USHBP1Q8N6Y0 703 aa23.86■■□□□ 1.41
CPSF4-203ENST00000430038 NSD3Q9BZ95 1437 aa23.84■■□□□ 1.41
CPSF4-203ENST00000430038 CDCA8Q53HL2 280 aa23.84■■□□□ 1.41
CPSF4-203ENST00000430038 LRRC4BQ9NT99 713 aa23.84■■□□□ 1.41
CPSF4-203ENST00000430038 PAPPAQ13219 1627 aa23.84■■□□□ 1.41
CPSF4-203ENST00000430038 RTL1A6NKG5 1358 aa23.83■■□□□ 1.41
CPSF4-203ENST00000430038 SLC15A2Q16348 729 aa23.83■■□□□ 1.41
CPSF4-203ENST00000430038 SPON1Q9HCB6 807 aa23.83■■□□□ 1.41
CPSF4-203ENST00000430038 EMILIN1Q9Y6C2 1016 aa23.82■■□□□ 1.4
CPSF4-203ENST00000430038 MAP2P11137 1827 aaKnown RBP23.82■■□□□ 1.4
CPSF4-203ENST00000430038 DOT1LQ8TEK3 1739 aa23.81■■□□□ 1.4
CPSF4-203ENST00000430038 ZBTB7AO95365 584 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms