RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 TRMT44Q8IYL2 757 aaKnown RBP6.85□□□□□ -1.31
GYPB-201ENST00000429670 SPOCK3Q9BQ16 436 aa6.85□□□□□ -1.31
GYPB-201ENST00000429670 C1QTNF2Q9BXJ5 285 aa6.85□□□□□ -1.31
GYPB-201ENST00000429670 CELA2BP08218 269 aaPredicted RBP6.84□□□□□ -1.31
GYPB-201ENST00000429670 ZBTB3Q9H5J0 574 aa6.84□□□□□ -1.31
GYPB-201ENST00000429670 CFAP99D6REC4 459 aa6.83□□□□□ -1.32
GYPB-201ENST00000429670 NBPF14Q5TI25 921 aa6.83□□□□□ -1.32
GYPB-201ENST00000429670 SH3RF1Q7Z6J0 888 aa6.83□□□□□ -1.32
GYPB-201ENST00000429670 GALNT6Q8NCL4 622 aa6.83□□□□□ -1.32
GYPB-201ENST00000429670 DCAF5Q96JK2 942 aa6.83□□□□□ -1.32
GYPB-201ENST00000429670 PPP1R26Q5T8A7 1209 aaPredicted RBP6.82□□□□□ -1.32
GYPB-201ENST00000429670 PRPF38BQ5VTL8 546 aaKnown RBP6.82□□□□□ -1.32
GYPB-201ENST00000429670 PODNQ7Z5L7 613 aa6.82□□□□□ -1.32
GYPB-201ENST00000429670 HRCP23327 699 aa6.81□□□□□ -1.32
GYPB-201ENST00000429670 RSBN1LQ6PCB5 846 aaPredicted RBP6.81□□□□□ -1.32
GYPB-201ENST00000429670 VSIG10Q8N0Z9 540 aa6.81□□□□□ -1.32
GYPB-201ENST00000429670 KRTAP4-8Q9BYQ9 185 aa6.81□□□□□ -1.32
GYPB-201ENST00000429670 K7ELQ4 463 aaPredicted RBP6.8□□□□□ -1.32
GYPB-201ENST00000429670 DHX9Q08211 1270 aaKnown RBP6.8□□□□□ -1.32
GYPB-201ENST00000429670 CBLBQ13191 982 aa6.8□□□□□ -1.32
GYPB-201ENST00000429670 BEGAINQ9BUH8 593 aa6.8□□□□□ -1.32
GYPB-201ENST00000429670 TBC1D2Q9BYX2 928 aa6.8□□□□□ -1.32
GYPB-201ENST00000429670 PCDHB15Q9Y5E8 787 aa6.8□□□□□ -1.32
GYPB-201ENST00000429670 CNTNAP5Q8WYK1 1306 aa6.79□□□□□ -1.32
GYPB-201ENST00000429670 TTLL12Q14166 644 aaPredicted RBP6.79□□□□□ -1.32
GYPB-201ENST00000429670 SH3BP5LQ7L8J4 393 aa6.79□□□□□ -1.32
GYPB-201ENST00000429670 GPKOWQ92917 476 aaPredicted RBP eCLIP6.79□□□□□ -1.32
GYPB-201ENST00000429670 CDV3Q9UKY7 258 aaKnown RBP6.79□□□□□ -1.32
GYPB-201ENST00000429670 MAGEB6P1A0A0J9YX57 407 aa6.78□□□□□ -1.32
GYPB-201ENST00000429670 CTSOP43234 321 aaPredicted RBP6.78□□□□□ -1.32
GYPB-201ENST00000429670 HAP1P54257 671 aaPredicted RBP6.78□□□□□ -1.32
GYPB-201ENST00000429670 FOXR1Q6PIV2 292 aa6.78□□□□□ -1.32
GYPB-201ENST00000429670 NEDD1Q8NHV4 660 aa6.78□□□□□ -1.32
GYPB-201ENST00000429670 GMCL1Q96IK5 515 aa6.78□□□□□ -1.32
GYPB-201ENST00000429670 PSMG3-AS1Q96PY0 264 aa6.77□□□□□ -1.33
GYPB-201ENST00000429670 POLMQ9NP87 494 aaPredicted RBP6.77□□□□□ -1.33
GYPB-201ENST00000429670 PER1O15534 1290 aaPredicted RBP6.76□□□□□ -1.33
GYPB-201ENST00000429670 PROCP04070 461 aa6.76□□□□□ -1.33
GYPB-201ENST00000429670 BCRP11274 1271 aa6.76□□□□□ -1.33
GYPB-201ENST00000429670 RIC3Q7Z5B4 369 aa6.76□□□□□ -1.33
GYPB-201ENST00000429670 BCANQ96GW7 911 aa6.76□□□□□ -1.33
GYPB-201ENST00000429670 MBIPQ9NS73 344 aa6.76□□□□□ -1.33
GYPB-201ENST00000429670 KDM2AQ9Y2K7 1162 aa6.76□□□□□ -1.33
GYPB-201ENST00000429670 ITGB2P05107 769 aa6.75□□□□□ -1.33
GYPB-201ENST00000429670 RELBQ01201 579 aa6.75□□□□□ -1.33
GYPB-201ENST00000429670 Q8N3U1 123 aa6.75□□□□□ -1.33
GYPB-201ENST00000429670 TSC1Q92574 1164 aa6.75□□□□□ -1.33
GYPB-201ENST00000429670 INSM2Q96T92 566 aaPredicted RBP6.75□□□□□ -1.33
GYPB-201ENST00000429670 LRRC4BQ9NT99 713 aa6.75□□□□□ -1.33
GYPB-201ENST00000429670 SENP3-EIF4A1A0A087X0R7 540 aa6.74□□□□□ -1.33
GYPB-201ENST00000429670 NUTM2BA6NNL0 878 aaPredicted RBP6.74□□□□□ -1.33
GYPB-201ENST00000429670 NUTM2EB1AL46 878 aaPredicted RBP6.74□□□□□ -1.33
GYPB-201ENST00000429670 GAS6Q14393 721 aa6.74□□□□□ -1.33
GYPB-201ENST00000429670 AMHR2Q16671 573 aa6.74□□□□□ -1.33
GYPB-201ENST00000429670 ERFEQ4G0M1 354 aa6.74□□□□□ -1.33
GYPB-201ENST00000429670 NUTM2DQ5VT03 806 aaPredicted RBP6.74□□□□□ -1.33
GYPB-201ENST00000429670 GIGYF2Q6Y7W6 1299 aaKnown RBP6.74□□□□□ -1.33
GYPB-201ENST00000429670 NUTM2AQ8IVF1 878 aaPredicted RBP6.74□□□□□ -1.33
GYPB-201ENST00000429670 RNF217Q8TC41 542 aa6.74□□□□□ -1.33
GYPB-201ENST00000429670 AGBL1Q96MI9 1066 aa6.74□□□□□ -1.33
GYPB-201ENST00000429670 KCTD15Q96SI1 283 aaPredicted RBP6.74□□□□□ -1.33
GYPB-201ENST00000429670 CARD14Q9BXL6 1004 aa6.74□□□□□ -1.33
GYPB-201ENST00000429670 ALYREFQ86V81 257 aaKnown RBP6.73□□□□□ -1.33
GYPB-201ENST00000429670 BAG6P46379 1132 aa6.72□□□□□ -1.33
GYPB-201ENST00000429670 PDXDC2PQ6P474 469 aa6.72□□□□□ -1.33
GYPB-201ENST00000429670 LYSMD3Q7Z3D4 306 aa6.72□□□□□ -1.33
GYPB-201ENST00000429670 HELBQ8NG08 1087 aaPredicted RBP6.72□□□□□ -1.33
GYPB-201ENST00000429670 CABLES1Q8TDN4 633 aa6.72□□□□□ -1.33
GYPB-201ENST00000429670 TRIM52Q96A61 297 aa6.72□□□□□ -1.33
GYPB-201ENST00000429670 IGF1RP08069 1367 aa6.71□□□□□ -1.33
GYPB-201ENST00000429670 TUSC1Q2TAM9 212 aa6.71□□□□□ -1.34
GYPB-201ENST00000429670 SLC10A4Q96EP9 437 aa6.71□□□□□ -1.34
GYPB-201ENST00000429670 ZNF395Q9H8N7 513 aaPredicted RBP6.71□□□□□ -1.34
GYPB-201ENST00000429670 NSFL1CQ9UNZ2 370 aaKnown RBP6.71□□□□□ -1.34
GYPB-201ENST00000429670 CSPP1Q1MSJ5 1256 aa6.7□□□□□ -1.34
GYPB-201ENST00000429670 ZBTB33Q86T24 672 aa6.7□□□□□ -1.34
GYPB-201ENST00000429670 TRIM22Q8IYM9 498 aa6.7□□□□□ -1.34
GYPB-201ENST00000429670 ARHGAP9Q9BRR9 750 aa6.7□□□□□ -1.34
GYPB-201ENST00000429670 H7C1W4 665 aa6.69□□□□□ -1.34
GYPB-201ENST00000429670 KRTAP9-2Q9BYQ4 174 aa6.69□□□□□ -1.34
GYPB-201ENST00000429670 CUEDC1Q9NWM3 386 aaPredicted RBP6.69□□□□□ -1.34
GYPB-201ENST00000429670 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
GYPB-201ENST00000429670 PTGIRP43119 386 aa6.68□□□□□ -1.34
GYPB-201ENST00000429670 ACDQ96AP0 544 aa6.68□□□□□ -1.34
GYPB-201ENST00000429670 TRERF1Q96PN7 1200 aa6.68□□□□□ -1.34
GYPB-201ENST00000429670 LILRB3O75022 631 aa6.67□□□□□ -1.34
GYPB-201ENST00000429670 ADH1AP07327 375 aa6.67□□□□□ -1.34
GYPB-201ENST00000429670 INTS6LQ5JSJ4 861 aaKnown RBP6.67□□□□□ -1.34
GYPB-201ENST00000429670 BARGINQ6ZT62 677 aa6.67□□□□□ -1.34
GYPB-201ENST00000429670 OIP5O43482 229 aa6.66□□□□□ -1.34
GYPB-201ENST00000429670 FURINP09958 794 aa6.66□□□□□ -1.34
GYPB-201ENST00000429670 RNF144AP50876 292 aaPredicted RBP6.66□□□□□ -1.34
GYPB-201ENST00000429670 FOXD4L5Q5VV16 416 aaPredicted RBP6.66□□□□□ -1.34
GYPB-201ENST00000429670 ZNF837Q96EG3 531 aaPredicted RBP6.66□□□□□ -1.34
GYPB-201ENST00000429670 MKL2Q9ULH7 1088 aa6.66□□□□□ -1.34
GYPB-201ENST00000429670 KRTAP9-6A0A140TA67 174 aa6.65□□□□□ -1.34
GYPB-201ENST00000429670 KRBA1A5PL33 1030 aa6.65□□□□□ -1.34
GYPB-201ENST00000429670 DBN1Q16643 649 aa6.65□□□□□ -1.34
GYPB-201ENST00000429670 RIPOR1Q6ZS17 1223 aa6.65□□□□□ -1.34
GYPB-201ENST00000429670 PRICKLE2Q7Z3G6 844 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms