RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 QTRT2Q9H974 415 aaKnown RBP22.94■■□□□ 1.26
LINC00887-203ENST00000429578 KIF24Q5T7B8 1368 aa22.93■■□□□ 1.26
LINC00887-203ENST00000429578 RGPD5Q99666 1765 aa22.93■■□□□ 1.26
LINC00887-203ENST00000429578 PPM1GO15355 546 aaPredicted RBP22.92■■□□□ 1.26
LINC00887-203ENST00000429578 CFAP53Q96M91 514 aa22.92■■□□□ 1.26
LINC00887-203ENST00000429578 INSRP06213 1382 aa22.92■■□□□ 1.26
LINC00887-203ENST00000429578 COL3A1P02461 1466 aaPredicted RBP22.91■■□□□ 1.26
LINC00887-203ENST00000429578 COL18A1P39060 1754 aa22.9■■□□□ 1.26
LINC00887-203ENST00000429578 FLT4P35916 1363 aa22.9■■□□□ 1.26
LINC00887-203ENST00000429578 ARHGEF25Q86VW2 580 aa22.9■■□□□ 1.26
LINC00887-203ENST00000429578 USP21Q9UK80 565 aa22.9■■□□□ 1.26
LINC00887-203ENST00000429578 RTL1A6NKG5 1358 aa22.89■■□□□ 1.26
LINC00887-203ENST00000429578 RBM6P78332 1123 aaKnown RBP22.89■■□□□ 1.26
LINC00887-203ENST00000429578 CPDO75976 1380 aa22.88■■□□□ 1.25
LINC00887-203ENST00000429578 AMPHP49418 695 aa22.88■■□□□ 1.25
LINC00887-203ENST00000429578 HAP1P54257 671 aaPredicted RBP22.88■■□□□ 1.25
LINC00887-203ENST00000429578 ZC3H6P61129 1189 aaKnown RBP22.88■■□□□ 1.25
LINC00887-203ENST00000429578 PNISRQ8TF01 805 aaKnown RBP22.88■■□□□ 1.25
LINC00887-203ENST00000429578 ABCC6O95255 1503 aa22.87■■□□□ 1.25
LINC00887-203ENST00000429578 FNBP4Q8N3X1 1017 aaPredicted RBP22.87■■□□□ 1.25
LINC00887-203ENST00000429578 HOXC9P31274 260 aa22.85■■□□□ 1.25
LINC00887-203ENST00000429578 HSP90AB2PQ58FF8 381 aa22.85■■□□□ 1.25
LINC00887-203ENST00000429578 IP6K1Q92551 441 aa22.85■■□□□ 1.25
LINC00887-203ENST00000429578 TRPC5Q9UL62 973 aaPredicted RBP22.85■■□□□ 1.25
LINC00887-203ENST00000429578 KIAA0232Q92628 1395 aa22.84■■□□□ 1.25
LINC00887-203ENST00000429578 ZBTB7CA1YPR0 619 aa22.83■■□□□ 1.25
LINC00887-203ENST00000429578 DIAPH1O60610 1272 aaKnown RBP22.83■■□□□ 1.25
LINC00887-203ENST00000429578 LMO7Q8WWI1 1683 aa22.83■■□□□ 1.25
LINC00887-203ENST00000429578 RGS12O14924 1447 aa22.83■■□□□ 1.25
LINC00887-203ENST00000429578 BLMP54132 1417 aaPredicted RBP22.82■■□□□ 1.24
LINC00887-203ENST00000429578 RGPD1P0DJD0 1748 aa22.82■■□□□ 1.24
LINC00887-203ENST00000429578 COL14A1Q05707 1796 aaKnown RBP22.81■■□□□ 1.24
LINC00887-203ENST00000429578 FAM9BQ8IZU0 186 aa22.81■■□□□ 1.24
LINC00887-203ENST00000429578 UPF1Q92900 1129 aaKnown RBP eCLIP22.81■■□□□ 1.24
LINC00887-203ENST00000429578 RGPD2P0DJD1 1756 aa22.81■■□□□ 1.24
LINC00887-203ENST00000429578 WDR43Q15061 677 aaKnown RBP eCLIP22.8■■□□□ 1.24
LINC00887-203ENST00000429578 PRDM11Q9NQV5 511 aa22.8■■□□□ 1.24
LINC00887-203ENST00000429578 NUDCQ9Y266 331 aa22.8■■□□□ 1.24
LINC00887-203ENST00000429578 ATRNO75882 1429 aa22.8■■□□□ 1.24
LINC00887-203ENST00000429578 IL13P35225 146 aa22.79■■□□□ 1.24
LINC00887-203ENST00000429578 FAM208AQ9UK61 1670 aaKnown RBP22.79■■□□□ 1.24
LINC00887-203ENST00000429578 EIF4A2Q14240 407 aaKnown RBP22.79■■□□□ 1.24
LINC00887-203ENST00000429578 BCL9LQ86UU0 1499 aa22.78■■□□□ 1.24
LINC00887-203ENST00000429578 CHRNA2Q15822 529 aa22.78■■□□□ 1.24
LINC00887-203ENST00000429578 AXIN2Q9Y2T1 843 aa22.77■■□□□ 1.24
LINC00887-203ENST00000429578 PLCH1Q4KWH8 1693 aa22.77■■□□□ 1.24
LINC00887-203ENST00000429578 CAMTA1Q9Y6Y1 1673 aa22.76■■□□□ 1.23
LINC00887-203ENST00000429578 ADAMTS8Q9UP79 889 aa22.76■■□□□ 1.23
LINC00887-203ENST00000429578 U2SURPO15042 1029 aaKnown RBP22.75■■□□□ 1.23
LINC00887-203ENST00000429578 FAM83GA6ND36 823 aa22.74■■□□□ 1.23
LINC00887-203ENST00000429578 NWD2Q9ULI1 1742 aa22.74■■□□□ 1.23
LINC00887-203ENST00000429578 U2AF1L5P0DN76 240 aaPredicted RBP22.74■■□□□ 1.23
LINC00887-203ENST00000429578 U2AF1Q01081 240 aaKnown RBP eCLIP22.74■■□□□ 1.23
LINC00887-203ENST00000429578 ERBB3P21860 1342 aa22.73■■□□□ 1.23
LINC00887-203ENST00000429578 SLIT2O94813 1529 aa22.73■■□□□ 1.23
LINC00887-203ENST00000429578 UNC5CLQ8IV45 518 aa22.73■■□□□ 1.23
LINC00887-203ENST00000429578 LTV1Q96GA3 475 aaPredicted RBP22.73■■□□□ 1.23
LINC00887-203ENST00000429578 ANKRD24Q8TF21 1146 aa22.72■■□□□ 1.23
LINC00887-203ENST00000429578 GJD4Q96KN9 370 aaPredicted RBP22.71■■□□□ 1.23
LINC00887-203ENST00000429578 COL5A2P05997 1499 aaPredicted RBP22.71■■□□□ 1.23
LINC00887-203ENST00000429578 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.7■■□□□ 1.22
LINC00887-203ENST00000429578 IGSF1Q8N6C5 1336 aa22.7■■□□□ 1.22
LINC00887-203ENST00000429578 NRAPQ86VF7 1730 aa22.69■■□□□ 1.22
LINC00887-203ENST00000429578 EYA1Q99502 592 aa22.69■■□□□ 1.22
LINC00887-203ENST00000429578 FCHSD2O94868 740 aa22.67■■□□□ 1.22
LINC00887-203ENST00000429578 BTG4Q9NY30 223 aa22.67■■□□□ 1.22
LINC00887-203ENST00000429578 KDRP35968 1356 aa22.67■■□□□ 1.22
LINC00887-203ENST00000429578 HMOX1P09601 288 aa22.65■■□□□ 1.22
LINC00887-203ENST00000429578 NBPF6Q5VWK0 638 aa22.65■■□□□ 1.22
LINC00887-203ENST00000429578 NBPF4Q96M43 638 aa22.65■■□□□ 1.22
LINC00887-203ENST00000429578 WDR17Q8IZU2 1322 aa22.65■■□□□ 1.22
LINC00887-203ENST00000429578 NCAPD2Q15021 1401 aa22.65■■□□□ 1.22
LINC00887-203ENST00000429578 SULT6B1Q6IMI4 303 aa22.65■■□□□ 1.22
LINC00887-203ENST00000429578 RSPH6AQ9H0K4 717 aa22.65■■□□□ 1.22
LINC00887-203ENST00000429578 PNNQ9H307 717 aaKnown RBP22.65■■□□□ 1.22
LINC00887-203ENST00000429578 CSB-PGBD3P0DP91 1061 aa22.64■■□□□ 1.21
LINC00887-203ENST00000429578 EVA1CP58658 441 aa22.63■■□□□ 1.21
LINC00887-203ENST00000429578 AEBP1Q8IUX7 1158 aa22.63■■□□□ 1.21
LINC00887-203ENST00000429578 CCDC146Q8IYE0 955 aa22.62■■□□□ 1.21
LINC00887-203ENST00000429578 RUNDC1Q96C34 613 aa22.62■■□□□ 1.21
LINC00887-203ENST00000429578 PLEKHF1Q96S99 279 aa22.62■■□□□ 1.21
LINC00887-203ENST00000429578 CCDC9Q9Y3X0 531 aaKnown RBP22.62■■□□□ 1.21
LINC00887-203ENST00000429578 GLI3P10071 1580 aa22.62■■□□□ 1.21
LINC00887-203ENST00000429578 VPS72Q15906 364 aa22.62■■□□□ 1.21
LINC00887-203ENST00000429578 PRKAR2BP31323 418 aa22.61■■□□□ 1.21
LINC00887-203ENST00000429578 STRN4Q9NRL3 753 aa22.61■■□□□ 1.21
LINC00887-203ENST00000429578 NLRP2Q9NX02 1062 aa22.61■■□□□ 1.21
LINC00887-203ENST00000429578 DLG5Q8TDM6 1919 aa22.61■■□□□ 1.21
LINC00887-203ENST00000429578 YTHDC1Q96MU7 727 aaKnown RBP22.6■■□□□ 1.21
LINC00887-203ENST00000429578 CRB1P82279 1406 aa22.6■■□□□ 1.21
LINC00887-203ENST00000429578 USHBP1Q8N6Y0 703 aa22.6■■□□□ 1.21
LINC00887-203ENST00000429578 LARP1Q6PKG0 1096 aaKnown RBP22.59■■□□□ 1.21
LINC00887-203ENST00000429578 TOM1L2Q6ZVM7 507 aa22.59■■□□□ 1.21
LINC00887-203ENST00000429578 HNRNPUQ00839 825 aaKnown RBP eCLIP22.58■■□□□ 1.21
LINC00887-203ENST00000429578 WNK3Q9BYP7 1800 aa22.58■■□□□ 1.2
LINC00887-203ENST00000429578 MAPK8IP3Q9UPT6 1336 aa22.57■■□□□ 1.2
LINC00887-203ENST00000429578 NEFMP07197 916 aa22.57■■□□□ 1.2
LINC00887-203ENST00000429578 PARP4Q9UKK3 1724 aaKnown RBP22.57■■□□□ 1.2
LINC00887-203ENST00000429578 CARD10Q9BWT7 1032 aa22.57■■□□□ 1.2
LINC00887-203ENST00000429578 APAF1O14727 1248 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms