RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 KCTD15Q96SI1 283 aaPredicted RBP7.89□□□□□ -1.15
TIMM9P3-201ENST00000428659 ZC3H4Q9UPT8 1303 aaKnown RBP7.88□□□□□ -1.15
TIMM9P3-201ENST00000428659 CBLBQ13191 982 aa7.88□□□□□ -1.15
TIMM9P3-201ENST00000428659 INTS6LQ5JSJ4 861 aaKnown RBP7.88□□□□□ -1.15
TIMM9P3-201ENST00000428659 TRIM47Q96LD4 638 aa7.88□□□□□ -1.15
TIMM9P3-201ENST00000428659 TMPRSS4Q9NRS4 437 aa7.88□□□□□ -1.15
TIMM9P3-201ENST00000428659 TBC1D2BQ9UPU7 963 aa7.88□□□□□ -1.15
TIMM9P3-201ENST00000428659 PPP1R26Q5T8A7 1209 aaPredicted RBP7.87□□□□□ -1.15
TIMM9P3-201ENST00000428659 PURBQ96QR8 312 aaKnown RBP7.87□□□□□ -1.15
TIMM9P3-201ENST00000428659 RAB15P59190 212 aa7.86□□□□□ -1.15
TIMM9P3-201ENST00000428659 IRF5Q13568 498 aa7.86□□□□□ -1.15
TIMM9P3-201ENST00000428659 LCE2AQ5TA79 106 aaPredicted RBP7.86□□□□□ -1.15
TIMM9P3-201ENST00000428659 MRPL14Q6P1L8 145 aaKnown RBP7.86□□□□□ -1.15
TIMM9P3-201ENST00000428659 GPSM3Q9Y4H4 160 aa7.86□□□□□ -1.15
TIMM9P3-201ENST00000428659 GIGYF1O75420 1035 aaPredicted RBP7.85□□□□□ -1.15
TIMM9P3-201ENST00000428659 ADD1P35611 737 aaKnown RBP7.85□□□□□ -1.15
TIMM9P3-201ENST00000428659 CCDC116Q8IYX3 515 aa7.85□□□□□ -1.15
TIMM9P3-201ENST00000428659 SLC10A4Q96EP9 437 aa7.85□□□□□ -1.15
TIMM9P3-201ENST00000428659 ZBBXA8MT70 800 aa7.84□□□□□ -1.15
TIMM9P3-201ENST00000428659 C6orf118Q5T5N4 469 aa7.84□□□□□ -1.15
TIMM9P3-201ENST00000428659 ESPNB1AK53 854 aa7.83□□□□□ -1.16
TIMM9P3-201ENST00000428659 ERVH48-1M5A8F1 160 aa7.83□□□□□ -1.16
TIMM9P3-201ENST00000428659 DZIP3Q86Y13 1208 aaKnown RBP7.83□□□□□ -1.16
TIMM9P3-201ENST00000428659 KDF1Q8NAX2 398 aaPredicted RBP7.83□□□□□ -1.16
TIMM9P3-201ENST00000428659 AGBL1Q96MI9 1066 aa7.83□□□□□ -1.16
TIMM9P3-201ENST00000428659 LILRA1O75019 489 aa7.82□□□□□ -1.16
TIMM9P3-201ENST00000428659 MEIOBQ8N635 442 aa7.82□□□□□ -1.16
TIMM9P3-201ENST00000428659 GDPD2Q9HCC8 539 aa7.82□□□□□ -1.16
TIMM9P3-201ENST00000428659 PCDHB9Q9Y5E1 797 aa7.82□□□□□ -1.16
TIMM9P3-201ENST00000428659 VEGFBP49765 207 aa7.81□□□□□ -1.16
TIMM9P3-201ENST00000428659 NFX1Q12986 1120 aaKnown RBP7.81□□□□□ -1.16
TIMM9P3-201ENST00000428659 TSGA10IPQ3SY00 556 aa7.81□□□□□ -1.16
TIMM9P3-201ENST00000428659 ZNF784Q8NCA9 323 aaPredicted RBP7.81□□□□□ -1.16
TIMM9P3-201ENST00000428659 NDUFB9Q9Y6M9 179 aa7.81□□□□□ -1.16
TIMM9P3-201ENST00000428659 SOCS7O14512 581 aa7.8□□□□□ -1.16
TIMM9P3-201ENST00000428659 NR1H3Q13133 447 aa7.8□□□□□ -1.16
TIMM9P3-201ENST00000428659 MCM6Q14566 821 aa7.8□□□□□ -1.16
TIMM9P3-201ENST00000428659 Q6ZVU0 165 aa7.8□□□□□ -1.16
TIMM9P3-201ENST00000428659 POM121Q96HA1 1249 aa7.8□□□□□ -1.16
TIMM9P3-201ENST00000428659 SENP2Q9HC62 589 aa7.8□□□□□ -1.16
TIMM9P3-201ENST00000428659 EMILIN1Q9Y6C2 1016 aa7.8□□□□□ -1.16
TIMM9P3-201ENST00000428659 LINC00528Q8N1L1 170 aa7.79□□□□□ -1.16
TIMM9P3-201ENST00000428659 TREML4Q6UXN2 200 aa7.78□□□□□ -1.16
TIMM9P3-201ENST00000428659 BMP2P12643 396 aa7.77□□□□□ -1.17
TIMM9P3-201ENST00000428659 RELBQ01201 579 aa7.77□□□□□ -1.17
TIMM9P3-201ENST00000428659 VAC14Q08AM6 782 aa7.77□□□□□ -1.17
TIMM9P3-201ENST00000428659 PNMA1Q8ND90 353 aa7.77□□□□□ -1.17
TIMM9P3-201ENST00000428659 ZNF395Q9H8N7 513 aaPredicted RBP7.77□□□□□ -1.17
TIMM9P3-201ENST00000428659 DNMT3LQ9UJW3 386 aa7.77□□□□□ -1.17
TIMM9P3-201ENST00000428659 SOS2Q07890 1332 aaPredicted RBP7.77□□□□□ -1.17
TIMM9P3-201ENST00000428659 ABL2P42684 1182 aa7.76□□□□□ -1.17
TIMM9P3-201ENST00000428659 SCTRP47872 440 aa7.76□□□□□ -1.17
TIMM9P3-201ENST00000428659 KIFC2Q96AC6 838 aa7.76□□□□□ -1.17
TIMM9P3-201ENST00000428659 CDCA7Q9BWT1 371 aaPredicted RBP7.76□□□□□ -1.17
TIMM9P3-201ENST00000428659 CYLDQ9NQC7 956 aa7.76□□□□□ -1.17
TIMM9P3-201ENST00000428659 CDV3Q9UKY7 258 aaKnown RBP7.76□□□□□ -1.17
TIMM9P3-201ENST00000428659 COG6Q9Y2V7 657 aa7.76□□□□□ -1.17
TIMM9P3-201ENST00000428659 FIGNL2A6NMB9 653 aa7.75□□□□□ -1.17
TIMM9P3-201ENST00000428659 TERTO14746 1132 aaKnown RBP7.75□□□□□ -1.17
TIMM9P3-201ENST00000428659 CTSOP43234 321 aaPredicted RBP7.75□□□□□ -1.17
TIMM9P3-201ENST00000428659 SCARF1Q14162 830 aa7.75□□□□□ -1.17
TIMM9P3-201ENST00000428659 CCDC85AQ96PX6 553 aaPredicted RBP7.75□□□□□ -1.17
TIMM9P3-201ENST00000428659 NBPF20Q3BBV1 942 aa7.74□□□□□ -1.17
TIMM9P3-201ENST00000428659 INSM2Q96T92 566 aaPredicted RBP7.74□□□□□ -1.17
TIMM9P3-201ENST00000428659 PGPEP1Q9NXJ5 209 aa7.74□□□□□ -1.17
TIMM9P3-201ENST00000428659 CEP126Q9P2H0 1117 aa7.74□□□□□ -1.17
TIMM9P3-201ENST00000428659 SPINT1O43278 529 aa7.73□□□□□ -1.17
TIMM9P3-201ENST00000428659 WFS1O76024 890 aa7.73□□□□□ -1.17
TIMM9P3-201ENST00000428659 PHTF2Q8N3S3 785 aa7.73□□□□□ -1.17
TIMM9P3-201ENST00000428659 TSEN34Q9BSV6 310 aaKnown RBP7.73□□□□□ -1.17
TIMM9P3-201ENST00000428659 DHX9Q08211 1270 aaKnown RBP7.72□□□□□ -1.17
TIMM9P3-201ENST00000428659 ERBB4Q15303 1308 aa7.72□□□□□ -1.17
TIMM9P3-201ENST00000428659 STAU1O95793 577 aaKnown RBP7.71□□□□□ -1.18
TIMM9P3-201ENST00000428659 ADH1AP07327 375 aa7.71□□□□□ -1.18
TIMM9P3-201ENST00000428659 TMEM132AQ24JP5 1023 aa7.71□□□□□ -1.18
TIMM9P3-201ENST00000428659 NXF1Q9UBU9 619 aaKnown RBP7.71□□□□□ -1.18
TIMM9P3-201ENST00000428659 PTGIRP43119 386 aa7.7□□□□□ -1.18
TIMM9P3-201ENST00000428659 FOXD4L5Q5VV16 416 aaPredicted RBP7.7□□□□□ -1.18
TIMM9P3-201ENST00000428659 OSBPL3Q9H4L5 887 aa7.7□□□□□ -1.18
TIMM9P3-201ENST00000428659 TTLL8A6PVC2 850 aa7.69□□□□□ -1.18
TIMM9P3-201ENST00000428659 MAN1A2O60476 641 aa7.69□□□□□ -1.18
TIMM9P3-201ENST00000428659 ERVK-9P63128 1117 aa7.69□□□□□ -1.18
TIMM9P3-201ENST00000428659 SEPT12Q8IYM1 358 aa7.69□□□□□ -1.18
TIMM9P3-201ENST00000428659 PCDHB11Q9Y5F2 797 aa7.69□□□□□ -1.18
TIMM9P3-201ENST00000428659 POM121CA8CG34 1229 aa7.68□□□□□ -1.18
TIMM9P3-201ENST00000428659 PIK3CDO00329 1044 aa7.68□□□□□ -1.18
TIMM9P3-201ENST00000428659 UPP2O95045 317 aa7.68□□□□□ -1.18
TIMM9P3-201ENST00000428659 H3BM21 787 aa7.67□□□□□ -1.18
TIMM9P3-201ENST00000428659 TRAK2O60296 914 aa7.67□□□□□ -1.18
TIMM9P3-201ENST00000428659 RNF217Q8TC41 542 aa7.67□□□□□ -1.18
TIMM9P3-201ENST00000428659 ADAMTS19Q8TE59 1207 aa7.67□□□□□ -1.18
TIMM9P3-201ENST00000428659 CLUAP1Q96AJ1 413 aa7.67□□□□□ -1.18
TIMM9P3-201ENST00000428659 SENP3-EIF4A1A0A087X0R7 540 aa7.66□□□□□ -1.18
TIMM9P3-201ENST00000428659 PPFIA3O75145 1194 aa7.66□□□□□ -1.18
TIMM9P3-201ENST00000428659 GPR161Q8N6U8 529 aaKnown RBP7.66□□□□□ -1.18
TIMM9P3-201ENST00000428659 A0A1W2PRU2 124 aa7.65□□□□□ -1.18
TIMM9P3-201ENST00000428659 APBB1O00213 710 aa7.65□□□□□ -1.18
TIMM9P3-201ENST00000428659 LORP23490 312 aaPredicted RBP7.65□□□□□ -1.18
TIMM9P3-201ENST00000428659 GMPRP36959 345 aa7.65□□□□□ -1.18
TIMM9P3-201ENST00000428659 PTSQ03393 145 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms