RNA–Protein interactions for RNA: ENST00000428479.3

GGCX-204, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 4

Gene GGCX, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-204ENST00000428479 AXIN2Q9Y2T1 843 aa16.9■□□□□ 0.3
GGCX-204ENST00000428479 GLI3P10071 1580 aa16.89■□□□□ 0.29
GGCX-204ENST00000428479 NSD2O96028 1365 aa16.89■□□□□ 0.29
GGCX-204ENST00000428479 COL5A2P05997 1499 aaPredicted RBP16.88■□□□□ 0.29
GGCX-204ENST00000428479 AMER1Q5JTC6 1135 aaPredicted RBP16.88■□□□□ 0.29
GGCX-204ENST00000428479 GJD4Q96KN9 370 aaPredicted RBP16.88■□□□□ 0.29
GGCX-204ENST00000428479 STRN4Q9NRL3 753 aa16.88■□□□□ 0.29
GGCX-204ENST00000428479 MAP3K19Q56UN5 1328 aa16.88■□□□□ 0.29
GGCX-204ENST00000428479 MAP2P11137 1827 aaKnown RBP16.86■□□□□ 0.29
GGCX-204ENST00000428479 EVA1CP58658 441 aa16.86■□□□□ 0.29
GGCX-204ENST00000428479 CDK12Q9NYV4 1490 aaPredicted RBP16.86■□□□□ 0.29
GGCX-204ENST00000428479 RRS1Q15050 365 aaKnown RBP16.85■□□□□ 0.29
GGCX-204ENST00000428479 LARP1Q6PKG0 1096 aaKnown RBP16.85■□□□□ 0.29
GGCX-204ENST00000428479 IP6K1Q92551 441 aa16.85■□□□□ 0.29
GGCX-204ENST00000428479 CCDC9Q9Y3X0 531 aaKnown RBP16.85■□□□□ 0.29
GGCX-204ENST00000428479 SPATA31A5Q5VU36 1347 aa16.85■□□□□ 0.29
GGCX-204ENST00000428479 SPATA31A7Q8IWB4 1347 aa16.85■□□□□ 0.29
GGCX-204ENST00000428479 MORC1Q86VD1 984 aa16.84■□□□□ 0.29
GGCX-204ENST00000428479 BLMP54132 1417 aaPredicted RBP16.84■□□□□ 0.29
GGCX-204ENST00000428479 PEAK1Q9H792 1746 aa16.84■□□□□ 0.29
GGCX-204ENST00000428479 RTL1A6NKG5 1358 aa16.83■□□□□ 0.28
GGCX-204ENST00000428479 AMPHP49418 695 aa16.83■□□□□ 0.28
GGCX-204ENST00000428479 SPATA31A1Q5TZJ5 1347 aa16.83■□□□□ 0.28
GGCX-204ENST00000428479 NPC1L1Q9UHC9 1359 aa16.83■□□□□ 0.28
GGCX-204ENST00000428479 RGS12O14924 1447 aa16.82■□□□□ 0.28
GGCX-204ENST00000428479 CRB1P82279 1406 aa16.82■□□□□ 0.28
GGCX-204ENST00000428479 WDR17Q8IZU2 1322 aa16.82■□□□□ 0.28
GGCX-204ENST00000428479 HOXC9P31274 260 aa16.82■□□□□ 0.28
GGCX-204ENST00000428479 EMILIN1Q9Y6C2 1016 aa16.82■□□□□ 0.28
GGCX-204ENST00000428479 KIF24Q5T7B8 1368 aa16.81■□□□□ 0.28
GGCX-204ENST00000428479 ERBB3P21860 1342 aa16.81■□□□□ 0.28
GGCX-204ENST00000428479 ONECUT3O60422 494 aaPredicted RBP16.81■□□□□ 0.28
GGCX-204ENST00000428479 TNNT2P45379 298 aaPredicted RBP16.81■□□□□ 0.28
GGCX-204ENST00000428479 CC2D1BQ5T0F9 858 aaKnown RBP16.8■□□□□ 0.28
GGCX-204ENST00000428479 ANKRD24Q8TF21 1146 aa16.8■□□□□ 0.28
GGCX-204ENST00000428479 POLKQ9UBT6 870 aa16.8■□□□□ 0.28
GGCX-204ENST00000428479 FLT4P35916 1363 aa16.79■□□□□ 0.28
GGCX-204ENST00000428479 CSB-PGBD3P0DP91 1061 aa16.79■□□□□ 0.28
GGCX-204ENST00000428479 DDX10Q13206 875 aaKnown RBP16.79■□□□□ 0.28
GGCX-204ENST00000428479 TOM1L2Q6ZVM7 507 aa16.79■□□□□ 0.28
GGCX-204ENST00000428479 USP35Q9P2H5 1018 aa16.79■□□□□ 0.28
GGCX-204ENST00000428479 FAM208AQ9UK61 1670 aaKnown RBP16.78■□□□□ 0.28
GGCX-204ENST00000428479 BRWD3Q6RI45 1802 aa16.78■□□□□ 0.28
GGCX-204ENST00000428479 FAM98CQ17RN3 349 aaKnown RBP16.78■□□□□ 0.28
GGCX-204ENST00000428479 THSD7AQ9UPZ6 1657 aa16.78■□□□□ 0.28
GGCX-204ENST00000428479 INSRP06213 1382 aa16.77■□□□□ 0.28
GGCX-204ENST00000428479 ZNF316A6NFI3 1004 aaPredicted RBP16.77■□□□□ 0.28
GGCX-204ENST00000428479 HSP90AB2PQ58FF8 381 aa16.77■□□□□ 0.28
GGCX-204ENST00000428479 TCP11L2Q8N4U5 519 aa16.77■□□□□ 0.28
GGCX-204ENST00000428479 CARD10Q9BWT7 1032 aa16.77■□□□□ 0.28
GGCX-204ENST00000428479 SMG6Q86US8 1419 aaKnown RBP16.77■□□□□ 0.27
GGCX-204ENST00000428479 RGPD2P0DJD1 1756 aa16.77■□□□□ 0.27
GGCX-204ENST00000428479 WNK3Q9BYP7 1800 aa16.76■□□□□ 0.27
GGCX-204ENST00000428479 PPM1GO15355 546 aaPredicted RBP16.76■□□□□ 0.27
GGCX-204ENST00000428479 CNGB1Q14028 1251 aaPredicted RBP16.76■□□□□ 0.27
GGCX-204ENST00000428479 BARGINQ6ZT62 677 aa16.76■□□□□ 0.27
GGCX-204ENST00000428479 SEPT12Q8IYM1 358 aa16.76■□□□□ 0.27
GGCX-204ENST00000428479 LTV1Q96GA3 475 aaPredicted RBP16.76■□□□□ 0.27
GGCX-204ENST00000428479 THRAP3Q9Y2W1 955 aaKnown RBP16.76■□□□□ 0.27
GGCX-204ENST00000428479 NLRP2Q9NX02 1062 aa16.75■□□□□ 0.27
GGCX-204ENST00000428479 PARP4Q9UKK3 1724 aaKnown RBP16.73■□□□□ 0.27
GGCX-204ENST00000428479 A0A0G2JS52 829 aa16.72■□□□□ 0.27
GGCX-204ENST00000428479 MYT1Q01538 1121 aa16.72■□□□□ 0.27
GGCX-204ENST00000428479 DISP2A7MBM2 1401 aa16.71■□□□□ 0.27
GGCX-204ENST00000428479 NBPF6Q5VWK0 638 aa16.7■□□□□ 0.26
GGCX-204ENST00000428479 NBPF4Q96M43 638 aa16.7■□□□□ 0.26
GGCX-204ENST00000428479 MTHFSP49914 203 aa16.69■□□□□ 0.26
GGCX-204ENST00000428479 EIF4A2Q14240 407 aaKnown RBP16.69■□□□□ 0.26
GGCX-204ENST00000428479 CDCA7Q9BWT1 371 aaPredicted RBP16.69■□□□□ 0.26
GGCX-204ENST00000428479 LRRC37A3O60309 1634 aa16.69■□□□□ 0.26
GGCX-204ENST00000428479 KRT27Q7Z3Y8 459 aa16.68■□□□□ 0.26
GGCX-204ENST00000428479 PARD3Q8TEW0 1356 aa16.67■□□□□ 0.26
GGCX-204ENST00000428479 SOCS7O14512 581 aa16.67■□□□□ 0.26
GGCX-204ENST00000428479 USHBP1Q8N6Y0 703 aa16.67■□□□□ 0.26
GGCX-204ENST00000428479 IL2RBP14784 551 aa16.66■□□□□ 0.26
GGCX-204ENST00000428479 PPP2R1AP30153 589 aa16.66■□□□□ 0.26
GGCX-204ENST00000428479 NCAPD2Q15021 1401 aa16.66■□□□□ 0.26
GGCX-204ENST00000428479 DDB1Q16531 1140 aa16.65■□□□□ 0.26
GGCX-204ENST00000428479 EYA1Q99502 592 aa16.65■□□□□ 0.26
GGCX-204ENST00000428479 RGPD1P0DJD0 1748 aa16.65■□□□□ 0.26
GGCX-204ENST00000428479 PDE3BQ13370 1112 aa16.64■□□□□ 0.25
GGCX-204ENST00000428479 MEGF6O75095 1541 aa16.64■□□□□ 0.25
GGCX-204ENST00000428479 COL3A1P02461 1466 aaPredicted RBP16.63■□□□□ 0.25
GGCX-204ENST00000428479 EXOC5O00471 708 aa16.63■□□□□ 0.25
GGCX-204ENST00000428479 IL13P35225 146 aa16.63■□□□□ 0.25
GGCX-204ENST00000428479 FAM182BQ5T319 152 aa16.63■□□□□ 0.25
GGCX-204ENST00000428479 IGSF1Q8N6C5 1336 aa16.63■□□□□ 0.25
GGCX-204ENST00000428479 TNS2Q63HR2 1409 aa16.62■□□□□ 0.25
GGCX-204ENST00000428479 RALBP1Q15311 655 aa16.62■□□□□ 0.25
GGCX-204ENST00000428479 OVOS2A0A0G2JMS6 1433 aa16.62■□□□□ 0.25
GGCX-204ENST00000428479 RAPGEF4Q8WZA2 1011 aa16.61■□□□□ 0.25
GGCX-204ENST00000428479 SHANK3Q9BYB0 1731 aa16.6■□□□□ 0.25
GGCX-204ENST00000428479 DIAPH1O60610 1272 aaKnown RBP16.6■□□□□ 0.25
GGCX-204ENST00000428479 TATP17735 454 aaPredicted RBP16.6■□□□□ 0.25
GGCX-204ENST00000428479 MARCH10Q8NA82 808 aaPredicted RBP16.6■□□□□ 0.25
GGCX-204ENST00000428479 UPF1Q92900 1129 aaKnown RBP eCLIP16.6■□□□□ 0.25
GGCX-204ENST00000428479 FAM196AQ6ZSG2 479 aa16.58■□□□□ 0.24
GGCX-204ENST00000428479 CFAP53Q96M91 514 aa16.58■□□□□ 0.24
GGCX-204ENST00000428479 PKD1L3Q7Z443 1732 aa16.58■□□□□ 0.24
GGCX-204ENST00000428479 SBF2Q86WG5 1849 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms