RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 LRP2BPQ9P2M1 347 aa11.89□□□□□ -0.51
CLTCL1-202ENST00000427926 EXOC5O00471 708 aa11.88□□□□□ -0.51
CLTCL1-202ENST00000427926 SASS6Q6UVJ0 657 aa11.88□□□□□ -0.51
CLTCL1-202ENST00000427926 CRBNQ96SW2 442 aa11.88□□□□□ -0.51
CLTCL1-202ENST00000427926 PTCD1O75127 700 aaKnown RBP11.88□□□□□ -0.51
CLTCL1-202ENST00000427926 LNPKQ9C0E8 428 aa11.88□□□□□ -0.51
CLTCL1-202ENST00000427926 LRPPRCP42704 1394 aaKnown RBP11.88□□□□□ -0.51
CLTCL1-202ENST00000427926 ABCA10Q8WWZ4 1543 aa11.88□□□□□ -0.51
CLTCL1-202ENST00000427926 TWISTNBQ3B726 338 aaPredicted RBP11.87□□□□□ -0.51
CLTCL1-202ENST00000427926 CEP126Q9P2H0 1117 aa11.87□□□□□ -0.51
CLTCL1-202ENST00000427926 CCDC69A6NI79 296 aa11.87□□□□□ -0.51
CLTCL1-202ENST00000427926 TRIM22Q8IYM9 498 aa11.87□□□□□ -0.51
CLTCL1-202ENST00000427926 TDO2P48775 406 aa11.87□□□□□ -0.51
CLTCL1-202ENST00000427926 FKBP4Q02790 459 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLTCL1-202ENST00000427926 GPS2Q13227 327 aa11.87□□□□□ -0.51
CLTCL1-202ENST00000427926 SRCIN1Q9C0H9 1055 aa11.87□□□□□ -0.51
CLTCL1-202ENST00000427926 CLEC11AQ9Y240 323 aa11.87□□□□□ -0.51
CLTCL1-202ENST00000427926 GNAI2P04899 355 aa11.86□□□□□ -0.51
CLTCL1-202ENST00000427926 SLC4A2P04920 1241 aa11.86□□□□□ -0.51
CLTCL1-202ENST00000427926 MPRIPQ6WCQ1 1025 aa11.86□□□□□ -0.51
CLTCL1-202ENST00000427926 CCDC85AQ96PX6 553 aaPredicted RBP11.86□□□□□ -0.51
CLTCL1-202ENST00000427926 CCDC7Q96M83 1385 aa11.86□□□□□ -0.51
CLTCL1-202ENST00000427926 CAVIN4Q5BKX8 364 aa11.86□□□□□ -0.51
CLTCL1-202ENST00000427926 NUP133Q8WUM0 1156 aa11.86□□□□□ -0.51
CLTCL1-202ENST00000427926 NEBLO76041 1014 aa11.86□□□□□ -0.51
CLTCL1-202ENST00000427926 KIF7Q2M1P5 1343 aa11.86□□□□□ -0.51
CLTCL1-202ENST00000427926 HOMER1Q86YM7 354 aa11.86□□□□□ -0.51
CLTCL1-202ENST00000427926 MAGEC2Q9UBF1 373 aaPredicted RBP11.86□□□□□ -0.51
CLTCL1-202ENST00000427926 PATL2C9JE40 543 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-202ENST00000427926 RRP1P56182 461 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-202ENST00000427926 ZNF287Q9HBT7 754 aa11.85□□□□□ -0.51
CLTCL1-202ENST00000427926 ABCF2Q9UG63 623 aa11.85□□□□□ -0.51
CLTCL1-202ENST00000427926 DESP17661 470 aa11.85□□□□□ -0.51
CLTCL1-202ENST00000427926 TNIP1Q15025 636 aa11.85□□□□□ -0.51
CLTCL1-202ENST00000427926 SKOR2Q2VWA4 1001 aaPredicted RBP11.85□□□□□ -0.51
CLTCL1-202ENST00000427926 SPINK5Q9NQ38 1064 aaPredicted RBP11.85□□□□□ -0.51
CLTCL1-202ENST00000427926 USP5P45974 858 aa11.85□□□□□ -0.51
CLTCL1-202ENST00000427926 CDR1P51861 262 aa11.85□□□□□ -0.51
CLTCL1-202ENST00000427926 NBPF8Q3BBV2 869 aa11.85□□□□□ -0.51
CLTCL1-202ENST00000427926 NBPF14Q5TI25 921 aa11.85□□□□□ -0.51
CLTCL1-202ENST00000427926 ZNF622Q969S3 477 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLTCL1-202ENST00000427926 HECW1Q76N89 1606 aa11.84□□□□□ -0.51
CLTCL1-202ENST00000427926 SDF4Q9BRK5 362 aa11.84□□□□□ -0.51
CLTCL1-202ENST00000427926 UBAC1Q9BSL1 405 aa11.84□□□□□ -0.51
CLTCL1-202ENST00000427926 DNAI2Q9GZS0 605 aa11.84□□□□□ -0.51
CLTCL1-202ENST00000427926 KIAA0586Q9BVV6 1533 aa11.84□□□□□ -0.51
CLTCL1-202ENST00000427926 RPGRIP1LQ68CZ1 1315 aa11.84□□□□□ -0.51
CLTCL1-202ENST00000427926 POLD1P28340 1107 aa11.84□□□□□ -0.51
CLTCL1-202ENST00000427926 ZNF592Q92610 1267 aa11.84□□□□□ -0.51
CLTCL1-202ENST00000427926 CNTLNQ9NXG0 1405 aa11.84□□□□□ -0.51
CLTCL1-202ENST00000427926 POLR3DP05423 398 aaPredicted RBP11.83□□□□□ -0.52
CLTCL1-202ENST00000427926 PPP4R3AQ6IN85 833 aa11.83□□□□□ -0.52
CLTCL1-202ENST00000427926 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.83□□□□□ -0.52
CLTCL1-202ENST00000427926 HFM1A2PYH4 1435 aa11.83□□□□□ -0.52
CLTCL1-202ENST00000427926 C9orf84Q5VXU9 1444 aa11.83□□□□□ -0.52
CLTCL1-202ENST00000427926 TNNT3P45378 269 aaPredicted RBP11.83□□□□□ -0.52
CLTCL1-202ENST00000427926 TROQ12816 1431 aaPredicted RBP11.83□□□□□ -0.52
CLTCL1-202ENST00000427926 FOXO3O43524 673 aa11.83□□□□□ -0.52
CLTCL1-202ENST00000427926 CDC45O75419 566 aa11.83□□□□□ -0.52
CLTCL1-202ENST00000427926 TCP11L2Q8N4U5 519 aa11.83□□□□□ -0.52
CLTCL1-202ENST00000427926 C6orf229H3BNL8 230 aa11.83□□□□□ -0.52
CLTCL1-202ENST00000427926 CCT4P50991 539 aaKnown RBP11.83□□□□□ -0.52
CLTCL1-202ENST00000427926 RRS1Q15050 365 aaKnown RBP11.83□□□□□ -0.52
CLTCL1-202ENST00000427926 NAT10Q9H0A0 1025 aaKnown RBP11.83□□□□□ -0.52
CLTCL1-202ENST00000427926 HMGB1P09429 215 aaKnown RBP11.82□□□□□ -0.52
CLTCL1-202ENST00000427926 METTL24Q5JXM2 366 aa11.82□□□□□ -0.52
CLTCL1-202ENST00000427926 EXOC6Q8TAG9 804 aa11.82□□□□□ -0.52
CLTCL1-202ENST00000427926 DZIP1Q86YF9 867 aaKnown RBP11.82□□□□□ -0.52
CLTCL1-202ENST00000427926 NUDT16Q96DE0 195 aaKnown RBP11.82□□□□□ -0.52
CLTCL1-202ENST00000427926 RUFY1Q96T51 708 aa11.82□□□□□ -0.52
CLTCL1-202ENST00000427926 IDH1O75874 414 aaKnown RBP11.82□□□□□ -0.52
CLTCL1-202ENST00000427926 SSBP05455 408 aaKnown RBP eCLIP11.82□□□□□ -0.52
CLTCL1-202ENST00000427926 CALRP27797 417 aaKnown RBP11.82□□□□□ -0.52
CLTCL1-202ENST00000427926 RFC4P35249 363 aa11.82□□□□□ -0.52
CLTCL1-202ENST00000427926 CEBPAP49715 358 aaPredicted RBP11.82□□□□□ -0.52
CLTCL1-202ENST00000427926 PHF8Q9UPP1 1060 aa11.82□□□□□ -0.52
CLTCL1-202ENST00000427926 CD109Q6YHK3 1445 aa11.82□□□□□ -0.52
CLTCL1-202ENST00000427926 IFIT1P09914 478 aaKnown RBP11.82□□□□□ -0.52
CLTCL1-202ENST00000427926 SLC12A5Q9H2X9 1139 aa11.82□□□□□ -0.52
CLTCL1-202ENST00000427926 BMP2KQ9NSY1 1161 aaPredicted RBP11.82□□□□□ -0.52
CLTCL1-202ENST00000427926 SLF2Q8IX21 1173 aa11.81□□□□□ -0.52
CLTCL1-202ENST00000427926 CCDC97Q96F63 343 aaPredicted RBP11.81□□□□□ -0.52
CLTCL1-202ENST00000427926 CADPS2Q86UW7 1296 aa11.81□□□□□ -0.52
CLTCL1-202ENST00000427926 MYO1BO43795 1136 aa11.81□□□□□ -0.52
CLTCL1-202ENST00000427926 PDILTQ8N807 584 aa11.81□□□□□ -0.52
CLTCL1-202ENST00000427926 TIAM1Q13009 1591 aa11.81□□□□□ -0.52
CLTCL1-202ENST00000427926 PDE4AP27815 886 aa11.81□□□□□ -0.52
CLTCL1-202ENST00000427926 PIP4K2AP48426 406 aaPredicted RBP11.81□□□□□ -0.52
CLTCL1-202ENST00000427926 HSP90AB3PQ58FF7 597 aa11.81□□□□□ -0.52
CLTCL1-202ENST00000427926 CHMP5Q9NZZ3 219 aa11.81□□□□□ -0.52
CLTCL1-202ENST00000427926 ATAD2Q6PL18 1390 aa11.81□□□□□ -0.52
CLTCL1-202ENST00000427926 ERBINQ96RT1 1412 aa11.8□□□□□ -0.52
CLTCL1-202ENST00000427926 AIDAQ96BJ3 306 aa11.8□□□□□ -0.52
CLTCL1-202ENST00000427926 C8orf37Q96NL8 207 aa11.8□□□□□ -0.52
CLTCL1-202ENST00000427926 MYO6Q9UM54 1294 aa11.8□□□□□ -0.52
CLTCL1-202ENST00000427926 NOL7Q9UMY1 257 aaKnown RBP11.8□□□□□ -0.52
CLTCL1-202ENST00000427926 CCDC61Q9Y6R9 512 aa11.8□□□□□ -0.52
CLTCL1-202ENST00000427926 FEZ1Q99689 392 aa11.8□□□□□ -0.52
CLTCL1-202ENST00000427926 URB2Q14146 1524 aaKnown RBP11.8□□□□□ -0.52
CLTCL1-202ENST00000427926 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms