RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 TTC21BQ7Z4L5 1316 aa12.97□□□□□ -0.33
RFX3-AS1-202ENST00000427722 A0A0G2JS52 829 aa12.97□□□□□ -0.33
RFX3-AS1-202ENST00000427722 NLRP6P59044 892 aa12.97□□□□□ -0.33
RFX3-AS1-202ENST00000427722 MYT1Q01538 1121 aa12.97□□□□□ -0.33
RFX3-AS1-202ENST00000427722 PHRF1Q9P1Y6 1649 aaKnown RBP12.97□□□□□ -0.33
RFX3-AS1-202ENST00000427722 COL14A1Q05707 1796 aaKnown RBP12.97□□□□□ -0.33
RFX3-AS1-202ENST00000427722 ZBTB7CA1YPR0 619 aa12.96□□□□□ -0.33
RFX3-AS1-202ENST00000427722 CPDO75976 1380 aa12.95□□□□□ -0.34
RFX3-AS1-202ENST00000427722 GCP02774 474 aa12.95□□□□□ -0.34
RFX3-AS1-202ENST00000427722 SEPT12Q8IYM1 358 aa12.95□□□□□ -0.34
RFX3-AS1-202ENST00000427722 SLC12A5Q9H2X9 1139 aa12.95□□□□□ -0.34
RFX3-AS1-202ENST00000427722 STRN4Q9NRL3 753 aa12.95□□□□□ -0.34
RFX3-AS1-202ENST00000427722 NRAPQ86VF7 1730 aa12.95□□□□□ -0.34
RFX3-AS1-202ENST00000427722 NWD2Q9ULI1 1742 aa12.95□□□□□ -0.34
RFX3-AS1-202ENST00000427722 CD163L1Q9NR16 1453 aa12.95□□□□□ -0.34
RFX3-AS1-202ENST00000427722 TTC21AQ8NDW8 1320 aa12.94□□□□□ -0.34
RFX3-AS1-202ENST00000427722 SOX12O15370 315 aa12.94□□□□□ -0.34
RFX3-AS1-202ENST00000427722 FAM98CQ17RN3 349 aaKnown RBP12.94□□□□□ -0.34
RFX3-AS1-202ENST00000427722 HDGFL2Q7Z4V5 671 aaPredicted RBP12.94□□□□□ -0.34
RFX3-AS1-202ENST00000427722 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.94□□□□□ -0.34
RFX3-AS1-202ENST00000427722 A0A1W2PP64 1363 aa12.94□□□□□ -0.34
RFX3-AS1-202ENST00000427722 SLIT3O75094 1523 aa12.93□□□□□ -0.34
RFX3-AS1-202ENST00000427722 SPATA31A5Q5VU36 1347 aa12.93□□□□□ -0.34
RFX3-AS1-202ENST00000427722 SPATA31A7Q8IWB4 1347 aa12.93□□□□□ -0.34
RFX3-AS1-202ENST00000427722 PIK3C2AO00443 1686 aa12.93□□□□□ -0.34
RFX3-AS1-202ENST00000427722 TERF2IPQ9NYB0 399 aa12.93□□□□□ -0.34
RFX3-AS1-202ENST00000427722 NINLQ9Y2I6 1382 aa12.93□□□□□ -0.34
RFX3-AS1-202ENST00000427722 TMF1P82094 1093 aa12.92□□□□□ -0.34
RFX3-AS1-202ENST00000427722 NME9Q86XW9 330 aa12.92□□□□□ -0.34
RFX3-AS1-202ENST00000427722 PUS7Q96PZ0 661 aaKnown RBP12.92□□□□□ -0.34
RFX3-AS1-202ENST00000427722 EDC4Q6P2E9 1401 aaKnown RBP12.91□□□□□ -0.34
RFX3-AS1-202ENST00000427722 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
RFX3-AS1-202ENST00000427722 EVA1CP58658 441 aa12.91□□□□□ -0.34
RFX3-AS1-202ENST00000427722 USP35Q9P2H5 1018 aa12.91□□□□□ -0.34
RFX3-AS1-202ENST00000427722 ZRANB1Q9UGI0 708 aa12.91□□□□□ -0.34
RFX3-AS1-202ENST00000427722 SPATA31A1Q5TZJ5 1347 aa12.9□□□□□ -0.34
RFX3-AS1-202ENST00000427722 CAMTA1Q9Y6Y1 1673 aa12.9□□□□□ -0.34
RFX3-AS1-202ENST00000427722 LARP1Q6PKG0 1096 aaKnown RBP12.9□□□□□ -0.34
RFX3-AS1-202ENST00000427722 COL5A2P05997 1499 aaPredicted RBP12.9□□□□□ -0.34
RFX3-AS1-202ENST00000427722 AKAP12Q02952 1782 aa12.89□□□□□ -0.35
RFX3-AS1-202ENST00000427722 ONECUT3O60422 494 aaPredicted RBP12.89□□□□□ -0.35
RFX3-AS1-202ENST00000427722 CD44P16070 742 aaKnown RBP12.89□□□□□ -0.35
RFX3-AS1-202ENST00000427722 KRT27Q7Z3Y8 459 aa12.89□□□□□ -0.35
RFX3-AS1-202ENST00000427722 KCNH5Q8NCM2 988 aa12.89□□□□□ -0.35
RFX3-AS1-202ENST00000427722 AATKQ6ZMQ8 1374 aa12.89□□□□□ -0.35
RFX3-AS1-202ENST00000427722 MON2Q7Z3U7 1717 aa12.88□□□□□ -0.35
RFX3-AS1-202ENST00000427722 USP31Q70CQ4 1352 aa12.88□□□□□ -0.35
RFX3-AS1-202ENST00000427722 ANKRD36BQ8N2N9 1353 aa12.88□□□□□ -0.35
RFX3-AS1-202ENST00000427722 LMO7Q8WWI1 1683 aa12.88□□□□□ -0.35
RFX3-AS1-202ENST00000427722 NFAT5O94916 1531 aa12.88□□□□□ -0.35
RFX3-AS1-202ENST00000427722 CDCA8Q53HL2 280 aa12.87□□□□□ -0.35
RFX3-AS1-202ENST00000427722 ARHGEF25Q86VW2 580 aa12.87□□□□□ -0.35
RFX3-AS1-202ENST00000427722 MNX1P50219 401 aaPredicted RBP12.86□□□□□ -0.35
RFX3-AS1-202ENST00000427722 TCP11L2Q8N4U5 519 aa12.86□□□□□ -0.35
RFX3-AS1-202ENST00000427722 OVOS2A0A0J9YW53 1432 aa12.86□□□□□ -0.35
RFX3-AS1-202ENST00000427722 OVOS2Q6IE36 1432 aa12.86□□□□□ -0.35
RFX3-AS1-202ENST00000427722 THSD7AQ9UPZ6 1657 aa12.85□□□□□ -0.35
RFX3-AS1-202ENST00000427722 BLMP54132 1417 aaPredicted RBP12.85□□□□□ -0.35
RFX3-AS1-202ENST00000427722 CRB1P82279 1406 aa12.85□□□□□ -0.35
RFX3-AS1-202ENST00000427722 CSB-PGBD3P0DP91 1061 aa12.84□□□□□ -0.35
RFX3-AS1-202ENST00000427722 FAM182BQ5T319 152 aa12.84□□□□□ -0.35
RFX3-AS1-202ENST00000427722 BARGINQ6ZT62 677 aa12.84□□□□□ -0.35
RFX3-AS1-202ENST00000427722 TOM1L2Q6ZVM7 507 aa12.84□□□□□ -0.35
RFX3-AS1-202ENST00000427722 POLR3GLQ9BT43 218 aa12.84□□□□□ -0.35
RFX3-AS1-202ENST00000427722 AXIN2Q9Y2T1 843 aa12.84□□□□□ -0.35
RFX3-AS1-202ENST00000427722 HSPA5P11021 654 aaKnown RBP12.83□□□□□ -0.36
RFX3-AS1-202ENST00000427722 EIF4G2P78344 907 aaKnown RBP eCLIP12.83□□□□□ -0.36
RFX3-AS1-202ENST00000427722 WDR17Q8IZU2 1322 aa12.83□□□□□ -0.36
RFX3-AS1-202ENST00000427722 SF3B2Q13435 895 aaKnown RBP12.82□□□□□ -0.36
RFX3-AS1-202ENST00000427722 CCDC125Q86Z20 511 aa12.82□□□□□ -0.36
RFX3-AS1-202ENST00000427722 MIER1Q8N108 512 aa12.82□□□□□ -0.36
RFX3-AS1-202ENST00000427722 COG3Q96JB2 828 aa12.82□□□□□ -0.36
RFX3-AS1-202ENST00000427722 EP400Q96L91 3159 aa12.81□□□□□ -0.36
RFX3-AS1-202ENST00000427722 THRAP3Q9Y2W1 955 aaKnown RBP12.81□□□□□ -0.36
RFX3-AS1-202ENST00000427722 ABCC6O95255 1503 aa12.81□□□□□ -0.36
RFX3-AS1-202ENST00000427722 USP54Q70EL1 1684 aa12.8□□□□□ -0.36
RFX3-AS1-202ENST00000427722 PDE3BQ13370 1112 aa12.8□□□□□ -0.36
RFX3-AS1-202ENST00000427722 DEFB132Q7Z7B7 95 aa12.8□□□□□ -0.36
RFX3-AS1-202ENST00000427722 NSD3Q9BZ95 1437 aa12.79□□□□□ -0.36
RFX3-AS1-202ENST00000427722 BRWD3Q6RI45 1802 aa12.79□□□□□ -0.36
RFX3-AS1-202ENST00000427722 GGNBP2Q9H3C7 697 aa12.79□□□□□ -0.36
RFX3-AS1-202ENST00000427722 ERBB3P21860 1342 aa12.79□□□□□ -0.36
RFX3-AS1-202ENST00000427722 GABBR2O75899 941 aa12.78□□□□□ -0.36
RFX3-AS1-202ENST00000427722 CARD10Q9BWT7 1032 aa12.78□□□□□ -0.36
RFX3-AS1-202ENST00000427722 COL18A1P39060 1754 aa12.78□□□□□ -0.36
RFX3-AS1-202ENST00000427722 FYB1O15117 783 aa12.77□□□□□ -0.37
RFX3-AS1-202ENST00000427722 FAM196AQ6ZSG2 479 aa12.77□□□□□ -0.37
RFX3-AS1-202ENST00000427722 ANKRD24Q8TF21 1146 aa12.77□□□□□ -0.37
RFX3-AS1-202ENST00000427722 CARD14Q9BXL6 1004 aa12.77□□□□□ -0.37
RFX3-AS1-202ENST00000427722 NLRP2Q9NX02 1062 aa12.77□□□□□ -0.37
RFX3-AS1-202ENST00000427722 MAP3K19Q56UN5 1328 aa12.77□□□□□ -0.37
RFX3-AS1-202ENST00000427722 MYOM1P52179 1685 aa12.77□□□□□ -0.37
RFX3-AS1-202ENST00000427722 TRIM37O94972 964 aa12.76□□□□□ -0.37
RFX3-AS1-202ENST00000427722 FBLN1P23142 703 aa12.76□□□□□ -0.37
RFX3-AS1-202ENST00000427722 BAG6P46379 1132 aa12.76□□□□□ -0.37
RFX3-AS1-202ENST00000427722 AMPHP49418 695 aa12.76□□□□□ -0.37
RFX3-AS1-202ENST00000427722 DDB1Q16531 1140 aa12.76□□□□□ -0.37
RFX3-AS1-202ENST00000427722 LTV1Q96GA3 475 aaPredicted RBP12.76□□□□□ -0.37
RFX3-AS1-202ENST00000427722 CCDC7Q96M83 1385 aa12.76□□□□□ -0.37
RFX3-AS1-202ENST00000427722 DISP2A7MBM2 1401 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms