RNA–Protein interactions for RNA: ENST00000427444.1

HFM1-202, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-202ENST00000427444 UPP2O95045 317 aa12.82□□□□□ -0.36
HFM1-202ENST00000427444 BMP2P12643 396 aa12.82□□□□□ -0.36
HFM1-202ENST00000427444 SLC10A4Q96EP9 437 aa12.82□□□□□ -0.36
HFM1-202ENST00000427444 PCMTD1Q96MG8 357 aaPredicted RBP12.82□□□□□ -0.36
HFM1-202ENST00000427444 MEIOBQ8N635 442 aa12.81□□□□□ -0.36
HFM1-202ENST00000427444 EMILIN1Q9Y6C2 1016 aa12.81□□□□□ -0.36
HFM1-202ENST00000427444 ZC3H4Q9UPT8 1303 aaKnown RBP12.81□□□□□ -0.36
HFM1-202ENST00000427444 WIPF1O43516 503 aa12.8□□□□□ -0.36
HFM1-202ENST00000427444 PTK2Q05397 1052 aa12.8□□□□□ -0.36
HFM1-202ENST00000427444 LINC00528Q8N1L1 170 aa12.8□□□□□ -0.36
HFM1-202ENST00000427444 KCTD15Q96SI1 283 aaPredicted RBP12.79□□□□□ -0.36
HFM1-202ENST00000427444 OCSTAMPQ9BR26 566 aa12.79□□□□□ -0.36
HFM1-202ENST00000427444 MAN1A2O60476 641 aa12.78□□□□□ -0.36
HFM1-202ENST00000427444 PPP1R26Q5T8A7 1209 aaPredicted RBP12.78□□□□□ -0.36
HFM1-202ENST00000427444 PNMA1Q8ND90 353 aa12.77□□□□□ -0.37
HFM1-202ENST00000427444 ADAM32Q8TC27 787 aa12.77□□□□□ -0.37
HFM1-202ENST00000427444 H3BM21 787 aa12.76□□□□□ -0.37
HFM1-202ENST00000427444 INSM1Q01101 510 aaPredicted RBP12.76□□□□□ -0.37
HFM1-202ENST00000427444 NPAS3Q8IXF0 933 aa12.76□□□□□ -0.37
HFM1-202ENST00000427444 GOPCQ9HD26 462 aa12.76□□□□□ -0.37
HFM1-202ENST00000427444 IRF7Q92985 503 aa12.75□□□□□ -0.37
HFM1-202ENST00000427444 PGPEP1Q9NXJ5 209 aa12.75□□□□□ -0.37
HFM1-202ENST00000427444 CDV3Q9UKY7 258 aaKnown RBP12.75□□□□□ -0.37
HFM1-202ENST00000427444 GPSM3Q9Y4H4 160 aa12.75□□□□□ -0.37
HFM1-202ENST00000427444 GMPRP36959 345 aa12.74□□□□□ -0.37
HFM1-202ENST00000427444 CBLBQ13191 982 aa12.74□□□□□ -0.37
HFM1-202ENST00000427444 TSEN34Q9BSV6 310 aaKnown RBP12.74□□□□□ -0.37
HFM1-202ENST00000427444 ERBB4Q15303 1308 aa12.72□□□□□ -0.37
HFM1-202ENST00000427444 BRPF1P55201 1214 aaPredicted RBP12.72□□□□□ -0.37
HFM1-202ENST00000427444 TMEM259Q4ZIN3 620 aa12.72□□□□□ -0.37
HFM1-202ENST00000427444 INTS6LQ5JSJ4 861 aaKnown RBP12.72□□□□□ -0.37
HFM1-202ENST00000427444 RAB15P59190 212 aa12.71□□□□□ -0.37
HFM1-202ENST00000427444 DHX9Q08211 1270 aaKnown RBP12.71□□□□□ -0.37
HFM1-202ENST00000427444 SOS2Q07890 1332 aaPredicted RBP12.7□□□□□ -0.38
HFM1-202ENST00000427444 TRIM34Q9BYJ4 488 aa12.7□□□□□ -0.38
HFM1-202ENST00000427444 DZIP3Q86Y13 1208 aaKnown RBP12.69□□□□□ -0.38
HFM1-202ENST00000427444 DNMT3LQ9UJW3 386 aa12.69□□□□□ -0.38
HFM1-202ENST00000427444 NBPF20Q3BBV1 942 aa12.68□□□□□ -0.38
HFM1-202ENST00000427444 Q6ZVU0 165 aa12.68□□□□□ -0.38
HFM1-202ENST00000427444 STK17AQ9UEE5 414 aa12.68□□□□□ -0.38
HFM1-202ENST00000427444 AGBL1Q96MI9 1066 aa12.67□□□□□ -0.38
HFM1-202ENST00000427444 TTLL8A6PVC2 850 aa12.66□□□□□ -0.38
HFM1-202ENST00000427444 TPRNQ4KMQ1 711 aa12.66□□□□□ -0.38
HFM1-202ENST00000427444 TMPRSS4Q9NRS4 437 aa12.66□□□□□ -0.38
HFM1-202ENST00000427444 FIGNL2A6NMB9 653 aa12.65□□□□□ -0.38
HFM1-202ENST00000427444 RELBQ01201 579 aa12.63□□□□□ -0.39
HFM1-202ENST00000427444 SPINT1O43278 529 aa12.62□□□□□ -0.39
HFM1-202ENST00000427444 PPFIA3O75145 1194 aa12.62□□□□□ -0.39
HFM1-202ENST00000427444 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.62□□□□□ -0.393e-9■■■■□ 20.1
HFM1-202ENST00000427444 ERVH48-1M5A8F1 160 aa12.61□□□□□ -0.39
HFM1-202ENST00000427444 ZNF784Q8NCA9 323 aaPredicted RBP12.61□□□□□ -0.39
HFM1-202ENST00000427444 GJD4Q96KN9 370 aaPredicted RBP12.61□□□□□ -0.39
HFM1-202ENST00000427444 ZNF395Q9H8N7 513 aaPredicted RBP12.6□□□□□ -0.39
HFM1-202ENST00000427444 PCDHB9Q9Y5E1 797 aa12.6□□□□□ -0.39
HFM1-202ENST00000427444 ZBBXA8MT70 800 aa12.59□□□□□ -0.39
HFM1-202ENST00000427444 INSM2Q96T92 566 aaPredicted RBP12.59□□□□□ -0.39
HFM1-202ENST00000427444 ZSCAN1Q8NBB4 408 aa12.58□□□□□ -0.4
HFM1-202ENST00000427444 POLMQ9NP87 494 aaPredicted RBP12.58□□□□□ -0.4
HFM1-202ENST00000427444 ESPNB1AK53 854 aa12.57□□□□□ -0.4
HFM1-202ENST00000427444 FBXO45P0C2W1 286 aa12.57□□□□□ -0.4
HFM1-202ENST00000427444 VSIG8P0DPA2 414 aa12.57□□□□□ -0.4
HFM1-202ENST00000427444 CTSOP43234 321 aaPredicted RBP12.57□□□□□ -0.4
HFM1-202ENST00000427444 PTSQ03393 145 aa12.57□□□□□ -0.4
HFM1-202ENST00000427444 ADD1P35611 737 aaKnown RBP12.56□□□□□ -0.4
HFM1-202ENST00000427444 LILRA1O75019 489 aa12.55□□□□□ -0.4
HFM1-202ENST00000427444 CYLDQ9NQC7 956 aa12.55□□□□□ -0.4
HFM1-202ENST00000427444 GIGYF1O75420 1035 aaPredicted RBP12.54□□□□□ -0.4
HFM1-202ENST00000427444 ADH1AP07327 375 aa12.54□□□□□ -0.4
HFM1-202ENST00000427444 LORP23490 312 aaPredicted RBP12.54□□□□□ -0.4
HFM1-202ENST00000427444 FAM181BA6NEQ2 426 aa12.52□□□□□ -0.41
HFM1-202ENST00000427444 SEPT12Q8IYM1 358 aa12.52□□□□□ -0.41
HFM1-202ENST00000427444 BANK1Q8NDB2 785 aa12.52□□□□□ -0.41
HFM1-202ENST00000427444 CCDC155Q8N6L0 562 aa12.51□□□□□ -0.41
HFM1-202ENST00000427444 MTMR14Q8NCE2 650 aa12.51□□□□□ -0.41
HFM1-202ENST00000427444 SNRKQ9NRH2 765 aa12.51□□□□□ -0.41
HFM1-202ENST00000427444 PTGIRP43119 386 aa12.5□□□□□ -0.41
HFM1-202ENST00000427444 NR1H3Q13133 447 aa12.49□□□□□ -0.41
HFM1-202ENST00000427444 KDF1Q8NAX2 398 aaPredicted RBP12.49□□□□□ -0.41
HFM1-202ENST00000427444 RNF217Q8TC41 542 aa12.49□□□□□ -0.41
HFM1-202ENST00000427444 NDUFB9Q9Y6M9 179 aa12.48□□□□□ -0.41
HFM1-202ENST00000427444 GPR161Q8N6U8 529 aaKnown RBP12.47□□□□□ -0.41
HFM1-202ENST00000427444 SLC35F4A4IF30 521 aa12.46□□□□□ -0.41
HFM1-202ENST00000427444 FOXD4L5Q5VV16 416 aaPredicted RBP12.46□□□□□ -0.41
HFM1-202ENST00000427444 GPR37L1O60883 481 aa12.45□□□□□ -0.42
HFM1-202ENST00000427444 TRIM52Q96A61 297 aa12.45□□□□□ -0.42
HFM1-202ENST00000427444 ZNF330Q9Y3S2 320 aaPredicted RBP12.44□□□□□ -0.42
HFM1-202ENST00000427444 ATP5J2-PTCD1G3V325 749 aa12.43□□□□□ -0.42
HFM1-202ENST00000427444 APBB1O00213 710 aa12.43□□□□□ -0.42
HFM1-202ENST00000427444 RNF20Q5VTR2 975 aa12.43□□□□□ -0.42
HFM1-202ENST00000427444 CDC14CA4D256 554 aa12.42□□□□□ -0.42
HFM1-202ENST00000427444 ITGA6P23229 1130 aa12.42□□□□□ -0.42
HFM1-202ENST00000427444 VWA5B2Q8N398 1253 aa12.42□□□□□ -0.42
HFM1-202ENST00000427444 CNTNAP3BQ96NU0 1288 aa12.42□□□□□ -0.42
HFM1-202ENST00000427444 CNTNAP3Q9BZ76 1288 aa12.42□□□□□ -0.42
HFM1-202ENST00000427444 MEN1O00255 615 aa12.41□□□□□ -0.42
HFM1-202ENST00000427444 SOCS7O14512 581 aa12.41□□□□□ -0.42
HFM1-202ENST00000427444 MCCD1P59942 119 aaPredicted RBP12.41□□□□□ -0.42
HFM1-202ENST00000427444 KRT76Q01546 638 aa12.41□□□□□ -0.42
HFM1-202ENST00000427444 LYSMD3Q7Z3D4 306 aa12.41□□□□□ -0.42
HFM1-202ENST00000427444 SENP3-EIF4A1A0A087X0R7 540 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms