RNA–Protein interactions for RNA: ENST00000427217.5

ARPC1B-205, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-205ENST00000427217 VPS72Q15906 364 aa27.57■■■□□ 2
ARPC1B-205ENST00000427217 RBM6P78332 1123 aaKnown RBP27.56■■■□□ 2
ARPC1B-205ENST00000427217 WNK3Q9BYP7 1800 aa27.55■■■□□ 2
ARPC1B-205ENST00000427217 RXRBP28702 533 aa27.55■■■□□ 2
ARPC1B-205ENST00000427217 KNSTRNQ9Y448 316 aa27.55■■■□□ 2
ARPC1B-205ENST00000427217 PEAK1Q9H792 1746 aa27.53■■■□□ 2
ARPC1B-205ENST00000427217 PER1O15534 1290 aaPredicted RBP27.53■■■□□ 2
ARPC1B-205ENST00000427217 GJD4Q96KN9 370 aaPredicted RBP27.53■■■□□ 2
ARPC1B-205ENST00000427217 BLMP54132 1417 aaPredicted RBP27.52■■■□□ 2
ARPC1B-205ENST00000427217 RTL1A6NKG5 1358 aa27.52■■■□□ 2
ARPC1B-205ENST00000427217 ZBTB7CA1YPR0 619 aa27.51■■□□□ 1.99
ARPC1B-205ENST00000427217 KIF24Q5T7B8 1368 aa27.5■■□□□ 1.99
ARPC1B-205ENST00000427217 NPC1L1Q9UHC9 1359 aa27.5■■□□□ 1.99
ARPC1B-205ENST00000427217 AMER1Q5JTC6 1135 aaPredicted RBP27.5■■□□□ 1.99
ARPC1B-205ENST00000427217 MAP3K19Q56UN5 1328 aa27.49■■□□□ 1.99
ARPC1B-205ENST00000427217 BRWD3Q6RI45 1802 aa27.49■■□□□ 1.99
ARPC1B-205ENST00000427217 AXIN2Q9Y2T1 843 aa27.49■■□□□ 1.99
ARPC1B-205ENST00000427217 SPATA31A5Q5VU36 1347 aa27.48■■□□□ 1.99
ARPC1B-205ENST00000427217 SPATA31A7Q8IWB4 1347 aa27.48■■□□□ 1.99
ARPC1B-205ENST00000427217 THSD7AQ9UPZ6 1657 aa27.48■■□□□ 1.99
ARPC1B-205ENST00000427217 RGS12O14924 1447 aa27.48■■□□□ 1.99
ARPC1B-205ENST00000427217 CRB1P82279 1406 aa27.48■■□□□ 1.99
ARPC1B-205ENST00000427217 EVA1CP58658 441 aa27.47■■□□□ 1.99
ARPC1B-205ENST00000427217 STRN4Q9NRL3 753 aa27.47■■□□□ 1.99
ARPC1B-205ENST00000427217 RGPD2P0DJD1 1756 aa27.45■■□□□ 1.99
ARPC1B-205ENST00000427217 WDR17Q8IZU2 1322 aa27.45■■□□□ 1.99
ARPC1B-205ENST00000427217 IP6K1Q92551 441 aa27.45■■□□□ 1.98
ARPC1B-205ENST00000427217 CCDC9Q9Y3X0 531 aaKnown RBP27.45■■□□□ 1.98
ARPC1B-205ENST00000427217 SPATA31A1Q5TZJ5 1347 aa27.44■■□□□ 1.98
ARPC1B-205ENST00000427217 FBLN1P23142 703 aa27.43■■□□□ 1.98
ARPC1B-205ENST00000427217 LARP1Q6PKG0 1096 aaKnown RBP27.43■■□□□ 1.98
ARPC1B-205ENST00000427217 PARP4Q9UKK3 1724 aaKnown RBP27.43■■□□□ 1.98
ARPC1B-205ENST00000427217 FLT4P35916 1363 aa27.43■■□□□ 1.98
ARPC1B-205ENST00000427217 ERBB3P21860 1342 aa27.42■■□□□ 1.98
ARPC1B-205ENST00000427217 SMG6Q86US8 1419 aaKnown RBP27.42■■□□□ 1.98
ARPC1B-205ENST00000427217 HOXC9P31274 260 aa27.42■■□□□ 1.98
ARPC1B-205ENST00000427217 RRS1Q15050 365 aaKnown RBP27.42■■□□□ 1.98
ARPC1B-205ENST00000427217 AMPHP49418 695 aa27.41■■□□□ 1.98
ARPC1B-205ENST00000427217 ONECUT3O60422 494 aaPredicted RBP27.4■■□□□ 1.98
ARPC1B-205ENST00000427217 MORC1Q86VD1 984 aa27.4■■□□□ 1.98
ARPC1B-205ENST00000427217 THRAP3Q9Y2W1 955 aaKnown RBP27.39■■□□□ 1.98
ARPC1B-205ENST00000427217 INSRP06213 1382 aa27.38■■□□□ 1.97
ARPC1B-205ENST00000427217 BARGINQ6ZT62 677 aa27.37■■□□□ 1.97
ARPC1B-205ENST00000427217 TOM1L2Q6ZVM7 507 aa27.36■■□□□ 1.97
ARPC1B-205ENST00000427217 ANKRD24Q8TF21 1146 aa27.36■■□□□ 1.97
ARPC1B-205ENST00000427217 POLKQ9UBT6 870 aa27.36■■□□□ 1.97
ARPC1B-205ENST00000427217 EMILIN1Q9Y6C2 1016 aa27.36■■□□□ 1.97
ARPC1B-205ENST00000427217 TCP11L2Q8N4U5 519 aa27.35■■□□□ 1.97
ARPC1B-205ENST00000427217 CARD10Q9BWT7 1032 aa27.35■■□□□ 1.97
ARPC1B-205ENST00000427217 LRRC37A3O60309 1634 aa27.34■■□□□ 1.97
ARPC1B-205ENST00000427217 CSB-PGBD3P0DP91 1061 aa27.34■■□□□ 1.97
ARPC1B-205ENST00000427217 TNNT2P45379 298 aaPredicted RBP27.33■■□□□ 1.97
ARPC1B-205ENST00000427217 FAM98CQ17RN3 349 aaKnown RBP27.33■■□□□ 1.97
ARPC1B-205ENST00000427217 CC2D1BQ5T0F9 858 aaKnown RBP27.33■■□□□ 1.97
ARPC1B-205ENST00000427217 USP35Q9P2H5 1018 aa27.31■■□□□ 1.96
ARPC1B-205ENST00000427217 SEPT12Q8IYM1 358 aa27.3■■□□□ 1.96
ARPC1B-205ENST00000427217 DISP2A7MBM2 1401 aa27.3■■□□□ 1.96
ARPC1B-205ENST00000427217 HSP90AB2PQ58FF8 381 aa27.29■■□□□ 1.96
ARPC1B-205ENST00000427217 ZNF316A6NFI3 1004 aaPredicted RBP27.28■■□□□ 1.96
ARPC1B-205ENST00000427217 DDX10Q13206 875 aaKnown RBP27.27■■□□□ 1.96
ARPC1B-205ENST00000427217 PPM1GO15355 546 aaPredicted RBP27.26■■□□□ 1.95
ARPC1B-205ENST00000427217 LTV1Q96GA3 475 aaPredicted RBP27.26■■□□□ 1.95
ARPC1B-205ENST00000427217 CDCA7Q9BWT1 371 aaPredicted RBP27.26■■□□□ 1.95
ARPC1B-205ENST00000427217 NLRP2Q9NX02 1062 aa27.26■■□□□ 1.95
ARPC1B-205ENST00000427217 NCAPD2Q15021 1401 aa27.25■■□□□ 1.95
ARPC1B-205ENST00000427217 RGPD1P0DJD0 1748 aa27.25■■□□□ 1.95
ARPC1B-205ENST00000427217 A0A0G2JS52 829 aa27.23■■□□□ 1.95
ARPC1B-205ENST00000427217 MYT1Q01538 1121 aa27.23■■□□□ 1.95
ARPC1B-205ENST00000427217 SHANK3Q9BYB0 1731 aa27.22■■□□□ 1.95
ARPC1B-205ENST00000427217 PARD3Q8TEW0 1356 aa27.22■■□□□ 1.95
ARPC1B-205ENST00000427217 KRT27Q7Z3Y8 459 aa27.2■■□□□ 1.94
ARPC1B-205ENST00000427217 TNS2Q63HR2 1409 aa27.19■■□□□ 1.94
ARPC1B-205ENST00000427217 PKD1L3Q7Z443 1732 aa27.19■■□□□ 1.94
ARPC1B-205ENST00000427217 SBF2Q86WG5 1849 aa27.18■■□□□ 1.94
ARPC1B-205ENST00000427217 MTHFSP49914 203 aa27.18■■□□□ 1.94
ARPC1B-205ENST00000427217 NBPF6Q5VWK0 638 aa27.18■■□□□ 1.94
ARPC1B-205ENST00000427217 NBPF4Q96M43 638 aa27.18■■□□□ 1.94
ARPC1B-205ENST00000427217 EP400Q96L91 3159 aa27.17■■□□□ 1.94
ARPC1B-205ENST00000427217 IL2RBP14784 551 aa27.17■■□□□ 1.94
ARPC1B-205ENST00000427217 EIF4A2Q14240 407 aaKnown RBP27.17■■□□□ 1.94
ARPC1B-205ENST00000427217 COL3A1P02461 1466 aaPredicted RBP27.17■■□□□ 1.94
ARPC1B-205ENST00000427217 CNGB1Q14028 1251 aaPredicted RBP27.16■■□□□ 1.94
ARPC1B-205ENST00000427217 MEGF6O75095 1541 aa27.15■■□□□ 1.94
ARPC1B-205ENST00000427217 DDB1Q16531 1140 aa27.14■■□□□ 1.94
ARPC1B-205ENST00000427217 OVOS2A0A0G2JMS6 1433 aa27.14■■□□□ 1.93
ARPC1B-205ENST00000427217 IGSF1Q8N6C5 1336 aa27.13■■□□□ 1.93
ARPC1B-205ENST00000427217 PLEKHG2Q9H7P9 1386 aa27.12■■□□□ 1.93
ARPC1B-205ENST00000427217 PPP2R1AP30153 589 aa27.12■■□□□ 1.93
ARPC1B-205ENST00000427217 PDE3BQ13370 1112 aa27.12■■□□□ 1.93
ARPC1B-205ENST00000427217 EYA1Q99502 592 aa27.12■■□□□ 1.93
ARPC1B-205ENST00000427217 TNS1Q9HBL0 1735 aaKnown RBP27.11■■□□□ 1.93
ARPC1B-205ENST00000427217 RALBP1Q15311 655 aa27.1■■□□□ 1.93
ARPC1B-205ENST00000427217 USHBP1Q8N6Y0 703 aa27.1■■□□□ 1.93
ARPC1B-205ENST00000427217 EXOC5O00471 708 aa27.09■■□□□ 1.93
ARPC1B-205ENST00000427217 IL13P35225 146 aa27.09■■□□□ 1.93
ARPC1B-205ENST00000427217 BCL9O00512 1426 aa27.08■■□□□ 1.93
ARPC1B-205ENST00000427217 UPF1Q92900 1129 aaKnown RBP eCLIP27.08■■□□□ 1.93
ARPC1B-205ENST00000427217 RAPGEF4Q8WZA2 1011 aa27.07■■□□□ 1.92
ARPC1B-205ENST00000427217 KDRP35968 1356 aa27.06■■□□□ 1.92
ARPC1B-205ENST00000427217 DIAPH1O60610 1272 aaKnown RBP27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms