RNA–Protein interactions for RNA: ENST00000426713.1

LINC00116-202, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LINC00116, Length 461 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-202ENST00000426713 AKAP12Q02952 1782 aa21.75■■□□□ 1.07
LINC00116-202ENST00000426713 CSB-PGBD3P0DP91 1061 aa21.75■■□□□ 1.07
LINC00116-202ENST00000426713 CABP1Q9NZU7 370 aa21.75■■□□□ 1.07
LINC00116-202ENST00000426713 SOX12O15370 315 aa21.74■■□□□ 1.07
LINC00116-202ENST00000426713 STK32BQ9NY57 414 aa21.74■■□□□ 1.07
LINC00116-202ENST00000426713 BRD4O60885 1362 aaPredicted RBP21.74■■□□□ 1.07
LINC00116-202ENST00000426713 USP6P35125 1406 aa21.73■■□□□ 1.07
LINC00116-202ENST00000426713 MARCH10Q8NA82 808 aaPredicted RBP21.73■■□□□ 1.07
LINC00116-202ENST00000426713 MYOM1P52179 1685 aa21.72■■□□□ 1.07
LINC00116-202ENST00000426713 WNK3Q9BYP7 1800 aa21.72■■□□□ 1.07
LINC00116-202ENST00000426713 CDCA7Q9BWT1 371 aaPredicted RBP21.72■■□□□ 1.07
LINC00116-202ENST00000426713 WDR17Q8IZU2 1322 aa21.72■■□□□ 1.07
LINC00116-202ENST00000426713 QRICH2Q9H0J4 1663 aa21.72■■□□□ 1.07
LINC00116-202ENST00000426713 SLIT3O75094 1523 aa21.71■■□□□ 1.07
LINC00116-202ENST00000426713 PROM2Q8N271 834 aa21.71■■□□□ 1.07
LINC00116-202ENST00000426713 AXIN2Q9Y2T1 843 aa21.71■■□□□ 1.07
LINC00116-202ENST00000426713 TXNRD1Q16881 649 aa21.7■■□□□ 1.06
LINC00116-202ENST00000426713 RGPD5Q99666 1765 aa21.69■■□□□ 1.06
LINC00116-202ENST00000426713 ZNF784Q8NCA9 323 aaPredicted RBP21.69■■□□□ 1.06
LINC00116-202ENST00000426713 COL18A1P39060 1754 aa21.69■■□□□ 1.06
LINC00116-202ENST00000426713 EXOC5O00471 708 aa21.68■■□□□ 1.06
LINC00116-202ENST00000426713 PTGER2P43116 358 aa21.68■■□□□ 1.06
LINC00116-202ENST00000426713 FHDC1Q9C0D6 1143 aaPredicted RBP21.68■■□□□ 1.06
LINC00116-202ENST00000426713 PIK3C2AO00443 1686 aa21.68■■□□□ 1.06
LINC00116-202ENST00000426713 CPSF1Q10570 1443 aaKnown RBP21.67■■□□□ 1.06
LINC00116-202ENST00000426713 SLC15A2Q16348 729 aa21.67■■□□□ 1.06
LINC00116-202ENST00000426713 KCNH5Q8NCM2 988 aa21.66■■□□□ 1.06
LINC00116-202ENST00000426713 SYT17Q9BSW7 474 aa21.65■■□□□ 1.06
LINC00116-202ENST00000426713 CARD10Q9BWT7 1032 aa21.65■■□□□ 1.06
LINC00116-202ENST00000426713 ARHGEF25Q86VW2 580 aa21.64■■□□□ 1.05
LINC00116-202ENST00000426713 MTFR1LQ9H019 292 aa21.64■■□□□ 1.05
LINC00116-202ENST00000426713 EVC2Q86UK5 1308 aa21.63■■□□□ 1.05
LINC00116-202ENST00000426713 BCL9O00512 1426 aa21.63■■□□□ 1.05
LINC00116-202ENST00000426713 SENP3-EIF4A1A0A087X0R7 540 aa21.62■■□□□ 1.05
LINC00116-202ENST00000426713 ACSBG1Q96GR2 724 aa21.62■■□□□ 1.05
LINC00116-202ENST00000426713 TTC21BQ7Z4L5 1316 aa21.61■■□□□ 1.05
LINC00116-202ENST00000426713 CHD4Q14839 1912 aa21.61■■□□□ 1.05
LINC00116-202ENST00000426713 KAT6BQ8WYB5 2073 aa21.61■■□□□ 1.05
LINC00116-202ENST00000426713 ZNF692Q9BU19 519 aaPredicted RBP21.59■■□□□ 1.05
LINC00116-202ENST00000426713 CCDC7Q96M83 1385 aa21.59■■□□□ 1.05
LINC00116-202ENST00000426713 ARXQ96QS3 562 aa21.58■■□□□ 1.05
LINC00116-202ENST00000426713 TNS2Q63HR2 1409 aa21.57■■□□□ 1.04
LINC00116-202ENST00000426713 KLHL34Q8N239 644 aa21.57■■□□□ 1.04
LINC00116-202ENST00000426713 TRPM1Q7Z4N2 1603 aa21.56■■□□□ 1.04
LINC00116-202ENST00000426713 NLRP2Q9NX02 1062 aa21.56■■□□□ 1.04
LINC00116-202ENST00000426713 NHSQ6T4R5 1651 aa21.56■■□□□ 1.04
LINC00116-202ENST00000426713 TTC21AQ8NDW8 1320 aa21.55■■□□□ 1.04
LINC00116-202ENST00000426713 GPR162Q16538 588 aa21.55■■□□□ 1.04
LINC00116-202ENST00000426713 KTN1Q86UP2 1357 aaKnown RBP21.54■■□□□ 1.04
LINC00116-202ENST00000426713 SGIP1Q9BQI5 828 aa21.54■■□□□ 1.04
LINC00116-202ENST00000426713 C1QTNF8P60827 252 aa21.53■■□□□ 1.04
LINC00116-202ENST00000426713 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.53■■□□□ 1.04
LINC00116-202ENST00000426713 PELP1Q8IZL8 1130 aaKnown RBP21.53■■□□□ 1.04
LINC00116-202ENST00000426713 NFAT5O94916 1531 aa21.52■■□□□ 1.04
LINC00116-202ENST00000426713 BTAF1O14981 1849 aa21.51■■□□□ 1.03
LINC00116-202ENST00000426713 IL2RBP14784 551 aa21.51■■□□□ 1.03
LINC00116-202ENST00000426713 UTRNP46939 3433 aa21.5■■□□□ 1.03
LINC00116-202ENST00000426713 ABCC6O95255 1503 aa21.5■■□□□ 1.03
LINC00116-202ENST00000426713 ZNF827Q17R98 1081 aa21.49■■□□□ 1.03
LINC00116-202ENST00000426713 L3MBTL2Q969R5 705 aa21.49■■□□□ 1.03
LINC00116-202ENST00000426713 ERBB3P21860 1342 aa21.48■■□□□ 1.03
LINC00116-202ENST00000426713 ROCK2O75116 1388 aaKnown RBP21.48■■□□□ 1.03
LINC00116-202ENST00000426713 LTN1O94822 1766 aa21.47■■□□□ 1.03
LINC00116-202ENST00000426713 POLD1P28340 1107 aa21.47■■□□□ 1.03
LINC00116-202ENST00000426713 PAPPAQ13219 1627 aa21.47■■□□□ 1.03
LINC00116-202ENST00000426713 NME9Q86XW9 330 aa21.45■■□□□ 1.02
LINC00116-202ENST00000426713 ANKRD24Q8TF21 1146 aa21.45■■□□□ 1.02
LINC00116-202ENST00000426713 LRRC4BQ9NT99 713 aa21.45■■□□□ 1.02
LINC00116-202ENST00000426713 MAP3K5Q99683 1374 aa21.45■■□□□ 1.02
LINC00116-202ENST00000426713 MON2Q7Z3U7 1717 aa21.44■■□□□ 1.02
LINC00116-202ENST00000426713 GIGYF1O75420 1035 aaPredicted RBP21.44■■□□□ 1.02
LINC00116-202ENST00000426713 DDX54Q8TDD1 881 aaKnown RBP21.44■■□□□ 1.02
LINC00116-202ENST00000426713 TMC1Q8TDI8 760 aa21.43■■□□□ 1.02
LINC00116-202ENST00000426713 SYTL4Q96C24 671 aaPredicted RBP21.43■■□□□ 1.02
LINC00116-202ENST00000426713 TFCP2L1Q9NZI6 479 aa21.42■■□□□ 1.02
LINC00116-202ENST00000426713 NEUROD1Q13562 356 aa21.41■■□□□ 1.02
LINC00116-202ENST00000426713 SLC16A10Q8TF71 515 aa21.41■■□□□ 1.02
LINC00116-202ENST00000426713 USP31Q70CQ4 1352 aa21.4■■□□□ 1.02
LINC00116-202ENST00000426713 KCNQ4P56696 695 aa21.4■■□□□ 1.02
LINC00116-202ENST00000426713 AKT1S1Q96B36 256 aa21.4■■□□□ 1.02
LINC00116-202ENST00000426713 LTV1Q96GA3 475 aaPredicted RBP21.4■■□□□ 1.02
LINC00116-202ENST00000426713 SLC27A3Q5K4L6 730 aa21.39■■□□□ 1.01
LINC00116-202ENST00000426713 HDGFL2Q7Z4V5 671 aaPredicted RBP21.39■■□□□ 1.01
LINC00116-202ENST00000426713 PNPLA7Q6ZV29 1317 aa21.38■■□□□ 1.01
LINC00116-202ENST00000426713 MSH5O43196 834 aa21.38■■□□□ 1.01
LINC00116-202ENST00000426713 SIN3AQ96ST3 1273 aa21.38■■□□□ 1.01
LINC00116-202ENST00000426713 QSER1Q2KHR3 1735 aa21.36■■□□□ 1.01
LINC00116-202ENST00000426713 NLGN2Q8NFZ4 835 aa21.36■■□□□ 1.01
LINC00116-202ENST00000426713 SBNO2Q9Y2G9 1366 aa21.36■■□□□ 1.01
LINC00116-202ENST00000426713 USP54Q70EL1 1684 aa21.35■■□□□ 1.01
LINC00116-202ENST00000426713 PRIM1P49642 420 aaKnown RBP21.34■■□□□ 1.01
LINC00116-202ENST00000426713 SLC12A5Q9H2X9 1139 aa21.34■■□□□ 1.01
LINC00116-202ENST00000426713 TUBGCP6Q96RT7 1819 aa21.34■■□□□ 1.01
LINC00116-202ENST00000426713 TERF2IPQ9NYB0 399 aa21.32■■□□□ 1
LINC00116-202ENST00000426713 DOT1LQ8TEK3 1739 aa21.32■■□□□ 1
LINC00116-202ENST00000426713 CD163L1Q9NR16 1453 aa21.32■■□□□ 1
LINC00116-202ENST00000426713 IP6K1Q92551 441 aa21.31■■□□□ 1
LINC00116-202ENST00000426713 CCNL1Q9UK58 526 aaPredicted RBP21.31■■□□□ 1
LINC00116-202ENST00000426713 EDC4Q6P2E9 1401 aaKnown RBP21.3■■□□□ 1
LINC00116-202ENST00000426713 GRIN3BO60391 1043 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms