RNA–Protein interactions for RNA: ENST00000426635.6

LINC00472-203, long intergenic non-protein coding RNA 472, humanhuman

TSL 2 BASIC

Gene LINC00472, Length 2,958 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-203ENST00000426635 IQGAP1P46940 1657 aa20.64■□□□□ 0.9
LINC00472-203ENST00000426635 GADD45BO75293 160 aaPredicted RBP20.64■□□□□ 0.89
LINC00472-203ENST00000426635 HCLS1P14317 486 aaPredicted RBP20.64■□□□□ 0.89
LINC00472-203ENST00000426635 CT47B1P0C2W7 299 aaPredicted RBP20.64■□□□□ 0.89
LINC00472-203ENST00000426635 U2AF1L5P0DN76 240 aaPredicted RBP20.64■□□□□ 0.89
LINC00472-203ENST00000426635 U2AF1Q01081 240 aaKnown RBP eCLIP20.64■□□□□ 0.89
LINC00472-203ENST00000426635 UVSSAQ2YD98 709 aa20.64■□□□□ 0.89
LINC00472-203ENST00000426635 GCC1Q96CN9 775 aa20.64■□□□□ 0.89
LINC00472-203ENST00000426635 DNAJC2Q99543 621 aaKnown RBP20.64■□□□□ 0.89
LINC00472-203ENST00000426635 SCAF11Q99590 1463 aaKnown RBP20.63■□□□□ 0.89
LINC00472-203ENST00000426635 PHF14O94880 888 aa20.63■□□□□ 0.89
LINC00472-203ENST00000426635 MTHFSP49914 203 aa20.63■□□□□ 0.89
LINC00472-203ENST00000426635 FAM184AQ8NB25 1140 aa20.63■□□□□ 0.89
LINC00472-203ENST00000426635 NAA30Q147X3 362 aaPredicted RBP20.62■□□□□ 0.89
LINC00472-203ENST00000426635 CERS3Q8IU89 383 aa20.62■□□□□ 0.89
LINC00472-203ENST00000426635 PPIP5K1Q6PFW1 1433 aa20.62■□□□□ 0.89
LINC00472-203ENST00000426635 IPO8O15397 1037 aaKnown RBP20.61■□□□□ 0.89
LINC00472-203ENST00000426635 TERF2Q15554 542 aa20.61■□□□□ 0.89
LINC00472-203ENST00000426635 SPC24Q8NBT2 197 aa20.61■□□□□ 0.89
LINC00472-203ENST00000426635 TRERF1Q96PN7 1200 aa20.61■□□□□ 0.89
LINC00472-203ENST00000426635 KCNF1Q9H3M0 494 aa20.61■□□□□ 0.89
LINC00472-203ENST00000426635 KDM5AP29375 1690 aaKnown RBP20.61■□□□□ 0.89
LINC00472-203ENST00000426635 DDX41Q9UJV9 622 aaKnown RBP20.61■□□□□ 0.89
LINC00472-203ENST00000426635 SMARCA5O60264 1052 aaPredicted RBP20.6■□□□□ 0.89
LINC00472-203ENST00000426635 KIAA0556O60303 1618 aa20.6■□□□□ 0.89
LINC00472-203ENST00000426635 DISP1Q96F81 1524 aa20.6■□□□□ 0.89
LINC00472-203ENST00000426635 CEP152O94986 1710 aa20.59■□□□□ 0.89
LINC00472-203ENST00000426635 CAPN2P17655 700 aa20.58■□□□□ 0.89
LINC00472-203ENST00000426635 KDM4AO75164 1064 aa20.58■□□□□ 0.88
LINC00472-203ENST00000426635 PLB1Q6P1J6 1458 aa20.57■□□□□ 0.88
LINC00472-203ENST00000426635 TRIM6-TRIM34B2RNG4 842 aa20.57■□□□□ 0.88
LINC00472-203ENST00000426635 RSPH4AQ5TD94 716 aa20.57■□□□□ 0.88
LINC00472-203ENST00000426635 CFAP53Q96M91 514 aa20.57■□□□□ 0.88
LINC00472-203ENST00000426635 TRIM34Q9BYJ4 488 aa20.57■□□□□ 0.88
LINC00472-203ENST00000426635 BRD1O95696 1058 aa20.57■□□□□ 0.88
LINC00472-203ENST00000426635 NOL8Q76FK4 1167 aaKnown RBP20.57■□□□□ 0.88
LINC00472-203ENST00000426635 MORC2Q9Y6X9 1032 aaPredicted RBP20.56■□□□□ 0.88
LINC00472-203ENST00000426635 USP48Q86UV5 1035 aa20.56■□□□□ 0.88
LINC00472-203ENST00000426635 SIRT2Q8IXJ6 389 aa20.56■□□□□ 0.88
LINC00472-203ENST00000426635 NOS1P29475 1434 aa20.56■□□□□ 0.88
LINC00472-203ENST00000426635 AEBP1Q8IUX7 1158 aa20.55■□□□□ 0.88
LINC00472-203ENST00000426635 PLEKHM2Q8IWE5 1019 aa20.55■□□□□ 0.88
LINC00472-203ENST00000426635 ZBTB7BO15156 539 aaPredicted RBP20.55■□□□□ 0.88
LINC00472-203ENST00000426635 SLC20A2Q08357 652 aa20.55■□□□□ 0.88
LINC00472-203ENST00000426635 INTS3Q68E01 1043 aaKnown RBP20.55■□□□□ 0.88
LINC00472-203ENST00000426635 TMX3Q96JJ7 454 aa20.55■□□□□ 0.88
LINC00472-203ENST00000426635 PLEKHD1A6NEE1 506 aa20.55■□□□□ 0.88
LINC00472-203ENST00000426635 ERCC6Q03468 1493 aa20.55■□□□□ 0.88
LINC00472-203ENST00000426635 ANKRD36BQ8N2N9 1353 aa20.55■□□□□ 0.88
LINC00472-203ENST00000426635 KIF18AQ8NI77 898 aa20.55■□□□□ 0.88
LINC00472-203ENST00000426635 C16orf71Q8IYS4 520 aaPredicted RBP20.54■□□□□ 0.88
LINC00472-203ENST00000426635 C16orf45Q96MC5 204 aaPredicted RBP20.54■□□□□ 0.88
LINC00472-203ENST00000426635 MADDQ8WXG6 1647 aa20.54■□□□□ 0.88
LINC00472-203ENST00000426635 AP5Z1O43299 807 aa20.54■□□□□ 0.88
LINC00472-203ENST00000426635 NEK4P51957 841 aa20.54■□□□□ 0.88
LINC00472-203ENST00000426635 IRX3P78415 501 aaPredicted RBP20.54■□□□□ 0.88
LINC00472-203ENST00000426635 KRT222Q8N1A0 295 aa20.53■□□□□ 0.88
LINC00472-203ENST00000426635 NSD3Q9BZ95 1437 aa20.53■□□□□ 0.88
LINC00472-203ENST00000426635 CALCOCO1Q9P1Z2 691 aa20.53■□□□□ 0.88
LINC00472-203ENST00000426635 TTC22Q5TAA0 569 aa20.52■□□□□ 0.88
LINC00472-203ENST00000426635 TCHHQ07283 1943 aa20.51■□□□□ 0.87
LINC00472-203ENST00000426635 ERVK-7P63135 1459 aa20.51■□□□□ 0.87
LINC00472-203ENST00000426635 CCDC183Q5T5S1 534 aa20.51■□□□□ 0.87
LINC00472-203ENST00000426635 TRIM35Q9UPQ4 493 aa20.51■□□□□ 0.87
LINC00472-203ENST00000426635 TULP2O00295 520 aa20.5■□□□□ 0.87
LINC00472-203ENST00000426635 U2SURPO15042 1029 aaKnown RBP20.5■□□□□ 0.87
LINC00472-203ENST00000426635 ZBTB9Q96C00 473 aa20.5■□□□□ 0.87
LINC00472-203ENST00000426635 ABCC11Q96J66 1382 aa20.5■□□□□ 0.87
LINC00472-203ENST00000426635 TMPOP42166 694 aaKnown RBP20.49■□□□□ 0.87
LINC00472-203ENST00000426635 ZFP91Q96JP5 570 aaPredicted RBP20.49■□□□□ 0.87
LINC00472-203ENST00000426635 ST7Q9NRC1 585 aa20.49■□□□□ 0.87
LINC00472-203ENST00000426635 PTGS1P23219 599 aa20.49■□□□□ 0.87
LINC00472-203ENST00000426635 SMTNL1A8MU46 457 aa20.49■□□□□ 0.87
LINC00472-203ENST00000426635 SYCP1Q15431 976 aa20.49■□□□□ 0.87
LINC00472-203ENST00000426635 OTUD7AQ8TE49 926 aaPredicted RBP20.49■□□□□ 0.87
LINC00472-203ENST00000426635 CFAP44Q96MT7 982 aa20.49■□□□□ 0.87
LINC00472-203ENST00000426635 ZNF518AQ6AHZ1 1483 aa20.48■□□□□ 0.87
LINC00472-203ENST00000426635 SLC12A5Q9H2X9 1139 aa20.48■□□□□ 0.87
LINC00472-203ENST00000426635 CASC1Q6TDU7 716 aa20.48■□□□□ 0.87
LINC00472-203ENST00000426635 IFT57Q9NWB7 429 aa20.48■□□□□ 0.87
LINC00472-203ENST00000426635 TPM3P06753 285 aa20.47■□□□□ 0.87
LINC00472-203ENST00000426635 TNNT1P13805 278 aa20.47■□□□□ 0.87
LINC00472-203ENST00000426635 SDSP20132 328 aa20.47■□□□□ 0.87
LINC00472-203ENST00000426635 MX1P20591 662 aa20.47■□□□□ 0.87
LINC00472-203ENST00000426635 GOLGA6L6A8MZA4 724 aa20.47■□□□□ 0.87
LINC00472-203ENST00000426635 GIMAP6Q6P9H5 292 aa20.47■□□□□ 0.87
LINC00472-203ENST00000426635 CCDC112Q8NEF3 446 aa20.47■□□□□ 0.87
LINC00472-203ENST00000426635 ADAMTS12P58397 1594 aa20.47■□□□□ 0.87
LINC00472-203ENST00000426635 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.46■□□□□ 0.87
LINC00472-203ENST00000426635 APBB1O00213 710 aa20.46■□□□□ 0.87
LINC00472-203ENST00000426635 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.46■□□□□ 0.87
LINC00472-203ENST00000426635 V9GYY5 206 aaPredicted RBP20.46■□□□□ 0.87
LINC00472-203ENST00000426635 REC8O95072 547 aa20.45■□□□□ 0.86
LINC00472-203ENST00000426635 CFAP70Q5T0N1 1121 aa20.45■□□□□ 0.86
LINC00472-203ENST00000426635 ZNF592Q92610 1267 aa20.45■□□□□ 0.86
LINC00472-203ENST00000426635 CD109Q6YHK3 1445 aa20.45■□□□□ 0.86
LINC00472-203ENST00000426635 LRMPQ12912 555 aa20.45■□□□□ 0.86
LINC00472-203ENST00000426635 KMT5BQ4FZB7 885 aa20.45■□□□□ 0.86
LINC00472-203ENST00000426635 TTC37Q6PGP7 1564 aa20.44■□□□□ 0.86
LINC00472-203ENST00000426635 CNPY2Q9Y2B0 182 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms