RNA–Protein interactions for RNA: ENST00000425609.1

LINC00400-201, long intergenic non-protein coding RNA 400, humanhuman

TSL 3 BASIC

Gene LINC00400, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00400-201ENST00000425609 USP17L22D6RA61 530 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 USP17L17D6RBQ6 530 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 USP17L19D6RCP7 530 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 USP17L20D6RJB6 530 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 USP17L24Q0WX57 530 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 ZBTB33Q86T24 672 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 NKX2-3Q8TAU0 364 aa8.43□□□□□ -1.06
LINC00400-201ENST00000425609 MKRN1Q9UHC7 482 aaKnown RBP8.43□□□□□ -1.06
LINC00400-201ENST00000425609 LZTS3O60299 673 aaPredicted RBP8.42□□□□□ -1.06
LINC00400-201ENST00000425609 S1PR4O95977 384 aa8.42□□□□□ -1.06
LINC00400-201ENST00000425609 PTK7Q13308 1070 aa8.42□□□□□ -1.06
LINC00400-201ENST00000425609 MAP7D1Q3KQU3 841 aa8.42□□□□□ -1.06
LINC00400-201ENST00000425609 C4orf48Q5BLP8 95 aa8.42□□□□□ -1.06
LINC00400-201ENST00000425609 TMCO4Q5TGY1 634 aa8.42□□□□□ -1.06
LINC00400-201ENST00000425609 BAP1Q92560 729 aa8.42□□□□□ -1.06
LINC00400-201ENST00000425609 FCF1Q9Y324 198 aaKnown RBP8.42□□□□□ -1.06
LINC00400-201ENST00000425609 ATP5J2-PTCD1G3V325 749 aa8.41□□□□□ -1.06
LINC00400-201ENST00000425609 TSGA10IPQ3SY00 556 aa8.41□□□□□ -1.06
LINC00400-201ENST00000425609 ERFEQ4G0M1 354 aa8.41□□□□□ -1.06
LINC00400-201ENST00000425609 ZNF511Q8NB15 262 aa8.41□□□□□ -1.06
LINC00400-201ENST00000425609 FOXJ1Q92949 421 aa8.41□□□□□ -1.06
LINC00400-201ENST00000425609 CARD14Q9BXL6 1004 aa8.41□□□□□ -1.06
LINC00400-201ENST00000425609 MAGEB6P1A0A0J9YX57 407 aa8.4□□□□□ -1.06
LINC00400-201ENST00000425609 LINC01559Q495D7 138 aa8.4□□□□□ -1.06
LINC00400-201ENST00000425609 BPHLQ86WA6 291 aaPredicted RBP8.4□□□□□ -1.06
LINC00400-201ENST00000425609 DZIP3Q86Y13 1208 aaKnown RBP8.4□□□□□ -1.06
LINC00400-201ENST00000425609 CCDC85AQ96PX6 553 aaPredicted RBP8.4□□□□□ -1.06
LINC00400-201ENST00000425609 C1QTNF2Q9BXJ5 285 aa8.4□□□□□ -1.06
LINC00400-201ENST00000425609 IVNS1ABPQ9Y6Y0 642 aa8.4□□□□□ -1.06
LINC00400-201ENST00000425609 FAM69CQ0P6D2 419 aa8.39□□□□□ -1.07
LINC00400-201ENST00000425609 EML3Q32P44 896 aa8.39□□□□□ -1.07
LINC00400-201ENST00000425609 NPM2Q86SE8 214 aaKnown RBP8.39□□□□□ -1.07
LINC00400-201ENST00000425609 SLAIN2Q9P270 581 aa8.39□□□□□ -1.07
LINC00400-201ENST00000425609 GIGYF1O75420 1035 aaPredicted RBP8.38□□□□□ -1.07
LINC00400-201ENST00000425609 RASA1P20936 1047 aa8.38□□□□□ -1.07
LINC00400-201ENST00000425609 MFAP1P55081 439 aaKnown RBP8.38□□□□□ -1.07
LINC00400-201ENST00000425609 CLDN10P78369 228 aa8.38□□□□□ -1.07
LINC00400-201ENST00000425609 LARP1Q6PKG0 1096 aaKnown RBP8.38□□□□□ -1.07
LINC00400-201ENST00000425609 CDAN1Q8IWY9 1227 aa8.38□□□□□ -1.07
LINC00400-201ENST00000425609 RGS22Q8NE09 1264 aa8.38□□□□□ -1.07
LINC00400-201ENST00000425609 GNEQ9Y223 722 aaKnown RBP8.38□□□□□ -1.07
LINC00400-201ENST00000425609 DKK1O94907 266 aa8.37□□□□□ -1.07
LINC00400-201ENST00000425609 B4GALNT3Q6L9W6 998 aa8.37□□□□□ -1.07
LINC00400-201ENST00000425609 PHLDB3Q6NSJ2 640 aa8.37□□□□□ -1.07
LINC00400-201ENST00000425609 ANKMY2Q8IV38 441 aa8.37□□□□□ -1.07
LINC00400-201ENST00000425609 OGFOD1Q8N543 542 aa8.37□□□□□ -1.07
LINC00400-201ENST00000425609 DOLKQ9UPQ8 538 aa8.37□□□□□ -1.07
LINC00400-201ENST00000425609 ESPNB1AK53 854 aa8.36□□□□□ -1.07
LINC00400-201ENST00000425609 SH3BP2P78314 561 aa8.36□□□□□ -1.07
LINC00400-201ENST00000425609 TRMT44Q8IYL2 757 aaKnown RBP8.36□□□□□ -1.07
LINC00400-201ENST00000425609 SLC10A4Q96EP9 437 aa8.36□□□□□ -1.07
LINC00400-201ENST00000425609 AGERQ15109 404 aa8.35□□□□□ -1.07
LINC00400-201ENST00000425609 TRIM50Q86XT4 487 aa8.35□□□□□ -1.07
LINC00400-201ENST00000425609 FAM200AQ8TCP9 573 aa8.35□□□□□ -1.07
LINC00400-201ENST00000425609 CLP1Q92989 425 aaKnown RBP8.35□□□□□ -1.07
LINC00400-201ENST00000425609 CDCA7Q9BWT1 371 aaPredicted RBP8.35□□□□□ -1.07
LINC00400-201ENST00000425609 KIAA1024Q9UPX6 916 aa8.35□□□□□ -1.07
LINC00400-201ENST00000425609 NOD1Q9Y239 953 aa8.35□□□□□ -1.07
LINC00400-201ENST00000425609 PPEF1O14829 653 aaPredicted RBP8.34□□□□□ -1.07
LINC00400-201ENST00000425609 SSFA2P28290 1259 aa8.34□□□□□ -1.07
LINC00400-201ENST00000425609 DPYDQ12882 1025 aa8.34□□□□□ -1.07
LINC00400-201ENST00000425609 TXNDC2Q86VQ3 553 aa8.34□□□□□ -1.07
LINC00400-201ENST00000425609 SIX5Q8N196 739 aa8.34□□□□□ -1.07
LINC00400-201ENST00000425609 DNAAF2Q9NVR5 837 aaKnown RBP8.34□□□□□ -1.07
LINC00400-201ENST00000425609 ZBTB7BO15156 539 aaPredicted RBP8.33□□□□□ -1.08
LINC00400-201ENST00000425609 ITGBL1O95965 494 aaPredicted RBP8.33□□□□□ -1.08
LINC00400-201ENST00000425609 ATP1A2P50993 1020 aa8.33□□□□□ -1.08
LINC00400-201ENST00000425609 NBPF20Q3BBV1 942 aa8.33□□□□□ -1.08
LINC00400-201ENST00000425609 OXLD1Q5BKU9 147 aa8.33□□□□□ -1.08
LINC00400-201ENST00000425609 RNF20Q5VTR2 975 aa8.33□□□□□ -1.08
LINC00400-201ENST00000425609 SND1Q7KZF4 910 aaKnown RBP eCLIP8.33□□□□□ -1.08
LINC00400-201ENST00000425609 LARGE2Q8N3Y3 721 aa8.33□□□□□ -1.08
LINC00400-201ENST00000425609 ZNF594Q96JF6 807 aaPredicted RBP8.33□□□□□ -1.08
LINC00400-201ENST00000425609 MTMR7Q9Y216 660 aa8.33□□□□□ -1.08
LINC00400-201ENST00000425609 GTF2IP78347 998 aa8.32□□□□□ -1.08
LINC00400-201ENST00000425609 SWI5Q1ZZU3 235 aa8.32□□□□□ -1.08
LINC00400-201ENST00000425609 PLA2G2CQ5R387 149 aa8.32□□□□□ -1.08
LINC00400-201ENST00000425609 SEPT12Q8IYM1 358 aa8.32□□□□□ -1.08
LINC00400-201ENST00000425609 CDV3Q9UKY7 258 aaKnown RBP8.32□□□□□ -1.08
LINC00400-201ENST00000425609 RNF223E7ERA6 249 aa8.31□□□□□ -1.08
LINC00400-201ENST00000425609 TRIM32Q13049 653 aa8.31□□□□□ -1.08
LINC00400-201ENST00000425609 PCDHGA11Q9Y5H2 935 aa8.31□□□□□ -1.08
LINC00400-201ENST00000425609 RANGAP1P46060 587 aaPredicted RBP8.3□□□□□ -1.08
LINC00400-201ENST00000425609 SKOR1P84550 965 aa8.3□□□□□ -1.08
LINC00400-201ENST00000425609 KCNC4Q03721 635 aa8.3□□□□□ -1.08
LINC00400-201ENST00000425609 ANKLE1Q8NAG6 615 aa8.3□□□□□ -1.08
LINC00400-201ENST00000425609 CCDC125Q86Z20 511 aa8.29□□□□□ -1.08
LINC00400-201ENST00000425609 MAP4K5Q9Y4K4 846 aa8.29□□□□□ -1.08
LINC00400-201ENST00000425609 PCDHB11Q9Y5F2 797 aa8.29□□□□□ -1.08
LINC00400-201ENST00000425609 ATP2B4P23634 1241 aa8.28□□□□□ -1.08
LINC00400-201ENST00000425609 WNT7BP56706 349 aa8.28□□□□□ -1.08
LINC00400-201ENST00000425609 CCDC102BQ68D86 513 aa8.28□□□□□ -1.08
LINC00400-201ENST00000425609 CCER1Q8TC90 406 aaPredicted RBP8.28□□□□□ -1.08
LINC00400-201ENST00000425609 KCTD15Q96SI1 283 aaPredicted RBP8.28□□□□□ -1.08
LINC00400-201ENST00000425609 ZBTB24O43167 697 aaPredicted RBP8.27□□□□□ -1.09
LINC00400-201ENST00000425609 VARSP26640 1264 aaKnown RBP8.27□□□□□ -1.09
LINC00400-201ENST00000425609 SEC13P55735 322 aa8.27□□□□□ -1.09
LINC00400-201ENST00000425609 USP4Q13107 963 aa8.27□□□□□ -1.09
LINC00400-201ENST00000425609 CCDC27Q2M243 656 aa8.27□□□□□ -1.09
LINC00400-201ENST00000425609 INTS6LQ5JSJ4 861 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms