RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 DDB1Q16531 1140 aa21.52■■□□□ 1.04
ATG4B-209ENST00000425239 TOM1L2Q6ZVM7 507 aa21.52■■□□□ 1.04
ATG4B-209ENST00000425239 MARCH10Q8NA82 808 aaPredicted RBP21.52■■□□□ 1.04
ATG4B-209ENST00000425239 OVOS2A0A0G2JMS6 1433 aa21.52■■□□□ 1.04
ATG4B-209ENST00000425239 OVOS2A0A0J9YW53 1432 aa21.52■■□□□ 1.04
ATG4B-209ENST00000425239 OVOS2Q6IE36 1432 aa21.52■■□□□ 1.04
ATG4B-209ENST00000425239 NEUROD1Q13562 356 aa21.51■■□□□ 1.03
ATG4B-209ENST00000425239 PROM2Q8N271 834 aa21.51■■□□□ 1.03
ATG4B-209ENST00000425239 BCL9O00512 1426 aa21.51■■□□□ 1.03
ATG4B-209ENST00000425239 TTC21AQ8NDW8 1320 aa21.51■■□□□ 1.03
ATG4B-209ENST00000425239 WNK3Q9BYP7 1800 aa21.5■■□□□ 1.03
ATG4B-209ENST00000425239 NFAT5O94916 1531 aa21.5■■□□□ 1.03
ATG4B-209ENST00000425239 NBPF14Q5TI25 921 aa21.5■■□□□ 1.03
ATG4B-209ENST00000425239 KCNH5Q8NCM2 988 aa21.5■■□□□ 1.03
ATG4B-209ENST00000425239 RGPD3A6NKT7 1758 aaPredicted RBP21.49■■□□□ 1.03
ATG4B-209ENST00000425239 RGPD4Q7Z3J3 1758 aa21.49■■□□□ 1.03
ATG4B-209ENST00000425239 CARD10Q9BWT7 1032 aa21.49■■□□□ 1.03
ATG4B-209ENST00000425239 BCL11BQ9C0K0 894 aaPredicted RBP21.49■■□□□ 1.03
ATG4B-209ENST00000425239 CD163L1Q9NR16 1453 aa21.48■■□□□ 1.03
ATG4B-209ENST00000425239 SBNO2Q9Y2G9 1366 aa21.48■■□□□ 1.03
ATG4B-209ENST00000425239 UTRNP46939 3433 aa21.47■■□□□ 1.03
ATG4B-209ENST00000425239 CDCA7Q9BWT1 371 aaPredicted RBP21.47■■□□□ 1.03
ATG4B-209ENST00000425239 USP31Q70CQ4 1352 aa21.46■■□□□ 1.03
ATG4B-209ENST00000425239 KTN1Q86UP2 1357 aaKnown RBP21.46■■□□□ 1.03
ATG4B-209ENST00000425239 MON2Q7Z3U7 1717 aa21.46■■□□□ 1.03
ATG4B-209ENST00000425239 ANO8Q9HCE9 1232 aaPredicted RBP21.45■■□□□ 1.02
ATG4B-209ENST00000425239 USP54Q70EL1 1684 aa21.44■■□□□ 1.02
ATG4B-209ENST00000425239 SOX12O15370 315 aa21.43■■□□□ 1.02
ATG4B-209ENST00000425239 KCNQ2O43526 872 aa21.43■■□□□ 1.02
ATG4B-209ENST00000425239 ABCC6O95255 1503 aa21.42■■□□□ 1.02
ATG4B-209ENST00000425239 PDGFDQ9GZP0 370 aaPredicted RBP21.42■■□□□ 1.02
ATG4B-209ENST00000425239 SPON1Q9HCB6 807 aa21.41■■□□□ 1.02
ATG4B-209ENST00000425239 CASZ1Q86V15 1759 aa21.41■■□□□ 1.02
ATG4B-209ENST00000425239 EXOC5O00471 708 aa21.39■■□□□ 1.01
ATG4B-209ENST00000425239 NME9Q86XW9 330 aa21.39■■□□□ 1.01
ATG4B-209ENST00000425239 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.39■■□□□ 1.011e-8■□□□□ 9.2
ATG4B-209ENST00000425239 CCDC7Q96M83 1385 aa21.38■■□□□ 1.01
ATG4B-209ENST00000425239 CSB-PGBD3P0DP91 1061 aa21.38■■□□□ 1.01
ATG4B-209ENST00000425239 CARD11Q9BXL7 1154 aa21.38■■□□□ 1.01
ATG4B-209ENST00000425239 SLC12A5Q9H2X9 1139 aa21.38■■□□□ 1.01
ATG4B-209ENST00000425239 ERBB3P21860 1342 aa21.37■■□□□ 1.01
ATG4B-209ENST00000425239 TXNRD1Q16881 649 aa21.36■■□□□ 1.01
ATG4B-209ENST00000425239 PUS7Q96PZ0 661 aaKnown RBP21.35■■□□□ 1.01
ATG4B-209ENST00000425239 TNS2Q63HR2 1409 aa21.35■■□□□ 1.01
ATG4B-209ENST00000425239 LTN1O94822 1766 aa21.33■■□□□ 1.01
ATG4B-209ENST00000425239 PTGER2P43116 358 aa21.33■■□□□ 1.01
ATG4B-209ENST00000425239 TESK2Q96S53 571 aa21.32■■□□□ 1
ATG4B-209ENST00000425239 A0A1W2PP64 1363 aa21.32■■□□□ 1
ATG4B-209ENST00000425239 NINLQ9Y2I6 1382 aa21.32■■□□□ 1
ATG4B-209ENST00000425239 EDC4Q6P2E9 1401 aaKnown RBP21.31■■□□□ 1
ATG4B-209ENST00000425239 SLC15A2Q16348 729 aa21.31■■□□□ 1
ATG4B-209ENST00000425239 TMC1Q8TDI8 760 aa21.31■■□□□ 1
ATG4B-209ENST00000425239 NHSQ6T4R5 1651 aa21.31■■□□□ 1
ATG4B-209ENST00000425239 IL2RBP14784 551 aa21.29■■□□□ 1
ATG4B-209ENST00000425239 HDGFL2Q7Z4V5 671 aaPredicted RBP21.29■■□□□ 1
ATG4B-209ENST00000425239 ANKRD24Q8TF21 1146 aa21.29■■□□□ 1
ATG4B-209ENST00000425239 NLRP2Q9NX02 1062 aa21.29■■□□□ 1
ATG4B-209ENST00000425239 PPP1R1BQ9UD71 204 aaPredicted RBP21.29■■□□□ 1
ATG4B-209ENST00000425239 ZBTB7AO95365 584 aa21.28■■□□□ 1
ATG4B-209ENST00000425239 SGIP1Q9BQI5 828 aa21.28■■□□□ 1
ATG4B-209ENST00000425239 IP6K1Q92551 441 aa21.27■■□□□ 1
ATG4B-209ENST00000425239 ACSBG1Q96GR2 724 aa21.27■■□□□ 1
ATG4B-209ENST00000425239 TERF2IPQ9NYB0 399 aa21.26■□□□□ 0.99
ATG4B-209ENST00000425239 PAPPAQ13219 1627 aa21.26■□□□□ 0.99
ATG4B-209ENST00000425239 YY1P25490 414 aa21.25■□□□□ 0.99
ATG4B-209ENST00000425239 ATF5Q9Y2D1 282 aaPredicted RBP21.25■□□□□ 0.99
ATG4B-209ENST00000425239 LRRC4BQ9NT99 713 aa21.24■□□□□ 0.99
ATG4B-209ENST00000425239 STK32BQ9NY57 414 aa21.24■□□□□ 0.99
ATG4B-209ENST00000425239 MYOM1P52179 1685 aa21.24■□□□□ 0.99
ATG4B-209ENST00000425239 BTAF1O14981 1849 aa21.23■□□□□ 0.99
ATG4B-209ENST00000425239 ST20-MTHFSA0A0A6YYL1 179 aa21.23■□□□□ 0.99
ATG4B-209ENST00000425239 FBLN1P23142 703 aa21.23■□□□□ 0.99
ATG4B-209ENST00000425239 TONSLQ96HA7 1378 aa21.23■□□□□ 0.99
ATG4B-209ENST00000425239 GOLGB1Q14789 3259 aaKnown RBP21.22■□□□□ 0.99
ATG4B-209ENST00000425239 SYT17Q9BSW7 474 aa21.2■□□□□ 0.98
ATG4B-209ENST00000425239 MTFR1LQ9H019 292 aa21.2■□□□□ 0.98
ATG4B-209ENST00000425239 ZNF827Q17R98 1081 aa21.19■□□□□ 0.98
ATG4B-209ENST00000425239 MAP3K19Q56UN5 1328 aa21.19■□□□□ 0.98
ATG4B-209ENST00000425239 FAM208AQ9UK61 1670 aaKnown RBP21.18■□□□□ 0.98
ATG4B-209ENST00000425239 HOXC9P31274 260 aa21.17■□□□□ 0.98
ATG4B-209ENST00000425239 FHDC1Q9C0D6 1143 aaPredicted RBP21.17■□□□□ 0.98
ATG4B-209ENST00000425239 RGPD2P0DJD1 1756 aa21.16■□□□□ 0.98
ATG4B-209ENST00000425239 AKT1S1Q96B36 256 aa21.16■□□□□ 0.98
ATG4B-209ENST00000425239 KAT6BQ8WYB5 2073 aa21.16■□□□□ 0.98
ATG4B-209ENST00000425239 DDX54Q8TDD1 881 aaKnown RBP21.15■□□□□ 0.98
ATG4B-209ENST00000425239 LTV1Q96GA3 475 aaPredicted RBP21.15■□□□□ 0.98
ATG4B-209ENST00000425239 COG3Q96JB2 828 aa21.15■□□□□ 0.98
ATG4B-209ENST00000425239 SHANK3Q9BYB0 1731 aa21.15■□□□□ 0.98
ATG4B-209ENST00000425239 FYB1O15117 783 aa21.14■□□□□ 0.97
ATG4B-209ENST00000425239 NSD2O96028 1365 aa21.13■□□□□ 0.97
ATG4B-209ENST00000425239 ANKRD36BQ8N2N9 1353 aa21.13■□□□□ 0.97
ATG4B-209ENST00000425239 SLC24A1O60721 1099 aa21.13■□□□□ 0.97
ATG4B-209ENST00000425239 DCAF8L1A6NGE4 600 aa21.12■□□□□ 0.97
ATG4B-209ENST00000425239 COL24A1Q17RW2 1714 aa21.12■□□□□ 0.97
ATG4B-209ENST00000425239 PRIM1P49642 420 aaKnown RBP21.11■□□□□ 0.97
ATG4B-209ENST00000425239 SLC27A3Q5K4L6 730 aa21.11■□□□□ 0.97
ATG4B-209ENST00000425239 NBPF6Q5VWK0 638 aa21.11■□□□□ 0.97
ATG4B-209ENST00000425239 NBPF4Q96M43 638 aa21.11■□□□□ 0.97
ATG4B-209ENST00000425239 MAP3K5Q99683 1374 aa21.1■□□□□ 0.97
ATG4B-209ENST00000425239 MEGF6O75095 1541 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms