RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TOM1L2Q6ZVM7 507 aa9.53□□□□□ -0.88
SDCBP-203ENST00000424270 WWC3Q9ULE0 1092 aa9.53□□□□□ -0.88
SDCBP-203ENST00000424270 MINK1Q8N4C8 1332 aaPredicted RBP9.52□□□□□ -0.89
SDCBP-203ENST00000424270 PARP4Q9UKK3 1724 aaKnown RBP9.51□□□□□ -0.89
SDCBP-203ENST00000424270 CRB1P82279 1406 aa9.51□□□□□ -0.89
SDCBP-203ENST00000424270 SIRT1Q96EB6 747 aa9.51□□□□□ -0.89
SDCBP-203ENST00000424270 ATP7BP35670 1465 aa9.51□□□□□ -0.89
SDCBP-203ENST00000424270 ANKRD30BQ9BXX2 1392 aa9.5□□□□□ -0.89
SDCBP-203ENST00000424270 ABTB2Q8N961 1025 aa9.5□□□□□ -0.89
SDCBP-203ENST00000424270 MARCH10Q8NA82 808 aaPredicted RBP9.5□□□□□ -0.89
SDCBP-203ENST00000424270 SLC16A10Q8TF71 515 aa9.5□□□□□ -0.89
SDCBP-203ENST00000424270 SLC4A1APQ9BWU0 796 aaKnown RBP9.5□□□□□ -0.89
SDCBP-203ENST00000424270 TFCP2L1Q9NZI6 479 aa9.5□□□□□ -0.89
SDCBP-203ENST00000424270 TOPAZ1Q8N9V7 1692 aa9.5□□□□□ -0.89
SDCBP-203ENST00000424270 PHRF1Q9P1Y6 1649 aaKnown RBP9.49□□□□□ -0.89
SDCBP-203ENST00000424270 CSB-PGBD3P0DP91 1061 aa9.49□□□□□ -0.89
SDCBP-203ENST00000424270 ZNF827Q17R98 1081 aa9.49□□□□□ -0.89
SDCBP-203ENST00000424270 C16orf71Q8IYS4 520 aaPredicted RBP9.49□□□□□ -0.89
SDCBP-203ENST00000424270 DNAJC5GQ8N7S2 189 aa9.49□□□□□ -0.89
SDCBP-203ENST00000424270 ACSBG1Q96GR2 724 aa9.49□□□□□ -0.89
SDCBP-203ENST00000424270 PCDH10Q9P2E7 1040 aa9.49□□□□□ -0.89
SDCBP-203ENST00000424270 AATKQ6ZMQ8 1374 aa9.49□□□□□ -0.89
SDCBP-203ENST00000424270 CRYBG1Q9Y4K1 1723 aa9.48□□□□□ -0.89
SDCBP-203ENST00000424270 LOC105371045A0A1W2PR82 267 aa9.48□□□□□ -0.89
SDCBP-203ENST00000424270 KLRG1Q96E93 195 aa9.48□□□□□ -0.89
SDCBP-203ENST00000424270 CDCA7Q9BWT1 371 aaPredicted RBP9.48□□□□□ -0.89
SDCBP-203ENST00000424270 LRRC37A3O60309 1634 aa9.48□□□□□ -0.89
SDCBP-203ENST00000424270 PEAK1Q9H792 1746 aa9.48□□□□□ -0.89
SDCBP-203ENST00000424270 COL5A2P05997 1499 aaPredicted RBP9.47□□□□□ -0.89
SDCBP-203ENST00000424270 EXOC5O00471 708 aa9.47□□□□□ -0.89
SDCBP-203ENST00000424270 KIF3CO14782 793 aa9.47□□□□□ -0.89
SDCBP-203ENST00000424270 TOMM70O94826 608 aa9.47□□□□□ -0.89
SDCBP-203ENST00000424270 HTRA3P83110 453 aa9.47□□□□□ -0.89
SDCBP-203ENST00000424270 PRR36Q9H6K5 1346 aa9.47□□□□□ -0.89
SDCBP-203ENST00000424270 SBF2Q86WG5 1849 aa9.47□□□□□ -0.89
SDCBP-203ENST00000424270 WASLO00401 505 aaPredicted RBP9.46□□□□□ -0.9
SDCBP-203ENST00000424270 CFAP70Q5T0N1 1121 aa9.46□□□□□ -0.9
SDCBP-203ENST00000424270 TRAK1Q9UPV9 953 aa9.46□□□□□ -0.9
SDCBP-203ENST00000424270 BRD4O60885 1362 aaPredicted RBP9.46□□□□□ -0.9
SDCBP-203ENST00000424270 PIK3C2GO75747 1445 aa9.46□□□□□ -0.9
SDCBP-203ENST00000424270 TULP4Q9NRJ4 1543 aa9.46□□□□□ -0.9
SDCBP-203ENST00000424270 NLRP13Q86W25 1043 aa9.45□□□□□ -0.9
SDCBP-203ENST00000424270 ADCY9O60503 1353 aa9.45□□□□□ -0.9
SDCBP-203ENST00000424270 CPDO75976 1380 aa9.45□□□□□ -0.9
SDCBP-203ENST00000424270 GCP02774 474 aa9.44□□□□□ -0.9
SDCBP-203ENST00000424270 MSL1Q68DK7 614 aa9.44□□□□□ -0.9
SDCBP-203ENST00000424270 C14orf93Q9H972 538 aaKnown RBP9.44□□□□□ -0.9
SDCBP-203ENST00000424270 AKAP12Q02952 1782 aa9.44□□□□□ -0.9
SDCBP-203ENST00000424270 PNPLA7Q6ZV29 1317 aa9.43□□□□□ -0.9
SDCBP-203ENST00000424270 JMYQ8N9B5 988 aa9.43□□□□□ -0.9
SDCBP-203ENST00000424270 NUDT16Q96DE0 195 aaKnown RBP9.43□□□□□ -0.9
SDCBP-203ENST00000424270 HSPA1AP0DMV8 641 aaKnown RBP9.42□□□□□ -0.9
SDCBP-203ENST00000424270 HSPA1BP0DMV9 641 aaKnown RBP9.42□□□□□ -0.9
SDCBP-203ENST00000424270 LMO7Q8WWI1 1683 aa9.42□□□□□ -0.9
SDCBP-203ENST00000424270 BCL9O00512 1426 aa9.41□□□□□ -0.9
SDCBP-203ENST00000424270 ACEP12821 1306 aa9.41□□□□□ -0.9
SDCBP-203ENST00000424270 AKT1S1Q96B36 256 aa9.41□□□□□ -0.9
SDCBP-203ENST00000424270 LRRC4BQ9NT99 713 aa9.41□□□□□ -0.9
SDCBP-203ENST00000424270 CD2APQ9Y5K6 639 aa9.41□□□□□ -0.9
SDCBP-203ENST00000424270 WDR90Q96KV7 1748 aa9.41□□□□□ -0.9
SDCBP-203ENST00000424270 USP6P35125 1406 aa9.4□□□□□ -0.9
SDCBP-203ENST00000424270 WDR17Q8IZU2 1322 aa9.4□□□□□ -0.9
SDCBP-203ENST00000424270 SOX12O15370 315 aa9.4□□□□□ -0.9
SDCBP-203ENST00000424270 SLC27A3Q5K4L6 730 aa9.4□□□□□ -0.9
SDCBP-203ENST00000424270 SYTL4Q96C24 671 aaPredicted RBP9.4□□□□□ -0.9
SDCBP-203ENST00000424270 PAPPAQ13219 1627 aa9.39□□□□□ -0.91
SDCBP-203ENST00000424270 USP19O94966 1318 aa9.39□□□□□ -0.91
SDCBP-203ENST00000424270 GOLGB1Q14789 3259 aaKnown RBP9.39□□□□□ -0.91
SDCBP-203ENST00000424270 KCNQ4P56696 695 aa9.39□□□□□ -0.91
SDCBP-203ENST00000424270 NLRP6P59044 892 aa9.39□□□□□ -0.91
SDCBP-203ENST00000424270 RBM46Q8TBY0 533 aaKnown RBP9.39□□□□□ -0.91
SDCBP-203ENST00000424270 NMRK2Q9NPI5 230 aa9.39□□□□□ -0.91
SDCBP-203ENST00000424270 ITSN1Q15811 1721 aa9.39□□□□□ -0.91
SDCBP-203ENST00000424270 IGSF1Q8N6C5 1336 aa9.38□□□□□ -0.91
SDCBP-203ENST00000424270 NHSQ6T4R5 1651 aa9.38□□□□□ -0.91
SDCBP-203ENST00000424270 FSTL1Q12841 308 aa9.37□□□□□ -0.91
SDCBP-203ENST00000424270 FAM161AQ3B820 660 aa9.37□□□□□ -0.91
SDCBP-203ENST00000424270 CARD10Q9BWT7 1032 aa9.37□□□□□ -0.91
SDCBP-203ENST00000424270 CDK19Q9BWU1 502 aa9.37□□□□□ -0.91
SDCBP-203ENST00000424270 TNS2Q63HR2 1409 aa9.37□□□□□ -0.91
SDCBP-203ENST00000424270 SPATA31E1Q6ZUB1 1445 aa9.37□□□□□ -0.91
SDCBP-203ENST00000424270 CCDC7Q96M83 1385 aa9.36□□□□□ -0.91
SDCBP-203ENST00000424270 COL23A1Q86Y22 540 aaPredicted RBP9.35□□□□□ -0.91
SDCBP-203ENST00000424270 ARHGEF28Q8N1W1 1705 aaKnown RBP9.35□□□□□ -0.91
SDCBP-203ENST00000424270 NLRP2Q9NX02 1062 aa9.35□□□□□ -0.91
SDCBP-203ENST00000424270 CCNL1Q9UK58 526 aaPredicted RBP9.35□□□□□ -0.91
SDCBP-203ENST00000424270 AXIN2Q9Y2T1 843 aa9.35□□□□□ -0.91
SDCBP-203ENST00000424270 CCDC61Q9Y6R9 512 aa9.35□□□□□ -0.91
SDCBP-203ENST00000424270 WNK3Q9BYP7 1800 aa9.35□□□□□ -0.91
SDCBP-203ENST00000424270 PPIP5K1Q6PFW1 1433 aa9.34□□□□□ -0.91
SDCBP-203ENST00000424270 SRPK2P78362 688 aaKnown RBP9.34□□□□□ -0.91
SDCBP-203ENST00000424270 ARHGAP27Q6ZUM4 889 aa9.34□□□□□ -0.91
SDCBP-203ENST00000424270 DDX54Q8TDD1 881 aaKnown RBP9.34□□□□□ -0.91
SDCBP-203ENST00000424270 U3KPZ7 1027 aaPredicted RBP9.34□□□□□ -0.91
SDCBP-203ENST00000424270 POLR3AO14802 1390 aaPredicted RBP9.34□□□□□ -0.91
SDCBP-203ENST00000424270 BTAF1O14981 1849 aa9.33□□□□□ -0.92
SDCBP-203ENST00000424270 IL2RBP14784 551 aa9.33□□□□□ -0.92
SDCBP-203ENST00000424270 PPARGC1BQ86YN6 1023 aaKnown RBP9.33□□□□□ -0.92
SDCBP-203ENST00000424270 SMC1BQ8NDV3 1235 aa9.33□□□□□ -0.92
SDCBP-203ENST00000424270 BCS1LQ9Y276 419 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms