RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 COL5A2P05997 1499 aaPredicted RBP25.4■■□□□ 1.66
HDAC6-205ENST00000423941 SOX12O15370 315 aa25.4■■□□□ 1.66
HDAC6-205ENST00000423941 ONECUT3O60422 494 aaPredicted RBP25.39■■□□□ 1.66
HDAC6-205ENST00000423941 NSD2O96028 1365 aa25.39■■□□□ 1.65
HDAC6-205ENST00000423941 AMER1Q5JTC6 1135 aaPredicted RBP25.38■■□□□ 1.65
HDAC6-205ENST00000423941 SPATA31A5Q5VU36 1347 aa25.37■■□□□ 1.65
HDAC6-205ENST00000423941 SPATA31A7Q8IWB4 1347 aa25.37■■□□□ 1.65
HDAC6-205ENST00000423941 FBLN1P23142 703 aa25.37■■□□□ 1.65
HDAC6-205ENST00000423941 KNSTRNQ9Y448 316 aa25.36■■□□□ 1.65
HDAC6-205ENST00000423941 MAP3K19Q56UN5 1328 aa25.36■■□□□ 1.65
HDAC6-205ENST00000423941 IP6K1Q92551 441 aa25.35■■□□□ 1.65
HDAC6-205ENST00000423941 MAP2P11137 1827 aaKnown RBP25.34■■□□□ 1.65
HDAC6-205ENST00000423941 SPATA31A1Q5TZJ5 1347 aa25.34■■□□□ 1.65
HDAC6-205ENST00000423941 NPC1L1Q9UHC9 1359 aa25.33■■□□□ 1.65
HDAC6-205ENST00000423941 EVA1CP58658 441 aa25.33■■□□□ 1.65
HDAC6-205ENST00000423941 LARP1Q6PKG0 1096 aaKnown RBP25.33■■□□□ 1.65
HDAC6-205ENST00000423941 KIF24Q5T7B8 1368 aa25.32■■□□□ 1.64
HDAC6-205ENST00000423941 RGS12O14924 1447 aa25.32■■□□□ 1.64
HDAC6-205ENST00000423941 BLMP54132 1417 aaPredicted RBP25.32■■□□□ 1.64
HDAC6-205ENST00000423941 ZBTB7CA1YPR0 619 aa25.32■■□□□ 1.64
HDAC6-205ENST00000423941 STRN4Q9NRL3 753 aa25.32■■□□□ 1.64
HDAC6-205ENST00000423941 WDR17Q8IZU2 1322 aa25.31■■□□□ 1.64
HDAC6-205ENST00000423941 CRB1P82279 1406 aa25.3■■□□□ 1.64
HDAC6-205ENST00000423941 PEAK1Q9H792 1746 aa25.3■■□□□ 1.64
HDAC6-205ENST00000423941 RTL1A6NKG5 1358 aa25.3■■□□□ 1.64
HDAC6-205ENST00000423941 HOXC9P31274 260 aa25.29■■□□□ 1.64
HDAC6-205ENST00000423941 RRS1Q15050 365 aaKnown RBP25.29■■□□□ 1.64
HDAC6-205ENST00000423941 BARGINQ6ZT62 677 aa25.28■■□□□ 1.64
HDAC6-205ENST00000423941 CCDC9Q9Y3X0 531 aaKnown RBP25.28■■□□□ 1.64
HDAC6-205ENST00000423941 ERBB3P21860 1342 aa25.28■■□□□ 1.64
HDAC6-205ENST00000423941 THSD7AQ9UPZ6 1657 aa25.27■■□□□ 1.64
HDAC6-205ENST00000423941 THRAP3Q9Y2W1 955 aaKnown RBP25.27■■□□□ 1.64
HDAC6-205ENST00000423941 POLKQ9UBT6 870 aa25.26■■□□□ 1.63
HDAC6-205ENST00000423941 AMPHP49418 695 aa25.25■■□□□ 1.63
HDAC6-205ENST00000423941 CARD10Q9BWT7 1032 aa25.25■■□□□ 1.63
HDAC6-205ENST00000423941 BRWD3Q6RI45 1802 aa25.25■■□□□ 1.63
HDAC6-205ENST00000423941 FAM208AQ9UK61 1670 aaKnown RBP25.24■■□□□ 1.63
HDAC6-205ENST00000423941 TCP11L2Q8N4U5 519 aa25.24■■□□□ 1.63
HDAC6-205ENST00000423941 INSRP06213 1382 aa25.23■■□□□ 1.63
HDAC6-205ENST00000423941 FLT4P35916 1363 aa25.23■■□□□ 1.63
HDAC6-205ENST00000423941 FAM98CQ17RN3 349 aaKnown RBP25.23■■□□□ 1.63
HDAC6-205ENST00000423941 MORC1Q86VD1 984 aa25.23■■□□□ 1.63
HDAC6-205ENST00000423941 ANKRD24Q8TF21 1146 aa25.23■■□□□ 1.63
HDAC6-205ENST00000423941 EMILIN1Q9Y6C2 1016 aa25.23■■□□□ 1.63
HDAC6-205ENST00000423941 SMG6Q86US8 1419 aaKnown RBP25.22■■□□□ 1.63
HDAC6-205ENST00000423941 SEPT12Q8IYM1 358 aa25.22■■□□□ 1.63
HDAC6-205ENST00000423941 TOM1L2Q6ZVM7 507 aa25.21■■□□□ 1.63
HDAC6-205ENST00000423941 HSP90AB2PQ58FF8 381 aa25.2■■□□□ 1.62
HDAC6-205ENST00000423941 WNK3Q9BYP7 1800 aa25.2■■□□□ 1.62
HDAC6-205ENST00000423941 USP35Q9P2H5 1018 aa25.19■■□□□ 1.62
HDAC6-205ENST00000423941 RGPD2P0DJD1 1756 aa25.18■■□□□ 1.62
HDAC6-205ENST00000423941 PARP4Q9UKK3 1724 aaKnown RBP25.18■■□□□ 1.62
HDAC6-205ENST00000423941 SOCS7O14512 581 aa25.18■■□□□ 1.62
HDAC6-205ENST00000423941 CSB-PGBD3P0DP91 1061 aa25.18■■□□□ 1.62
HDAC6-205ENST00000423941 TNNT2P45379 298 aaPredicted RBP25.17■■□□□ 1.62
HDAC6-205ENST00000423941 CC2D1BQ5T0F9 858 aaKnown RBP25.17■■□□□ 1.62
HDAC6-205ENST00000423941 DISP2A7MBM2 1401 aa25.17■■□□□ 1.62
HDAC6-205ENST00000423941 NLRP2Q9NX02 1062 aa25.14■■□□□ 1.62
HDAC6-205ENST00000423941 DDX10Q13206 875 aaKnown RBP25.13■■□□□ 1.61
HDAC6-205ENST00000423941 CDCA7Q9BWT1 371 aaPredicted RBP25.13■■□□□ 1.61
HDAC6-205ENST00000423941 NBPF6Q5VWK0 638 aa25.12■■□□□ 1.61
HDAC6-205ENST00000423941 LTV1Q96GA3 475 aaPredicted RBP25.12■■□□□ 1.61
HDAC6-205ENST00000423941 NBPF4Q96M43 638 aa25.12■■□□□ 1.61
HDAC6-205ENST00000423941 NCAPD2Q15021 1401 aa25.12■■□□□ 1.61
HDAC6-205ENST00000423941 PPM1GO15355 546 aaPredicted RBP25.11■■□□□ 1.61
HDAC6-205ENST00000423941 KRT27Q7Z3Y8 459 aa25.11■■□□□ 1.61
HDAC6-205ENST00000423941 EP400Q96L91 3159 aa25.1■■□□□ 1.61
HDAC6-205ENST00000423941 ZNF316A6NFI3 1004 aaPredicted RBP25.1■■□□□ 1.61
HDAC6-205ENST00000423941 LRRC37A3O60309 1634 aa25.09■■□□□ 1.61
HDAC6-205ENST00000423941 MTHFSP49914 203 aa25.08■■□□□ 1.61
HDAC6-205ENST00000423941 EIF4A2Q14240 407 aaKnown RBP25.07■■□□□ 1.6
HDAC6-205ENST00000423941 IL2RBP14784 551 aa25.06■■□□□ 1.6
HDAC6-205ENST00000423941 A0A0G2JS52 829 aa25.05■■□□□ 1.6
HDAC6-205ENST00000423941 MYT1Q01538 1121 aa25.05■■□□□ 1.6
HDAC6-205ENST00000423941 PARD3Q8TEW0 1356 aa25.05■■□□□ 1.6
HDAC6-205ENST00000423941 UPF1Q92900 1129 aaKnown RBP eCLIP25.04■■□□□ 1.6
HDAC6-205ENST00000423941 EYA1Q99502 592 aa25.04■■□□□ 1.6
HDAC6-205ENST00000423941 DDB1Q16531 1140 aa25.03■■□□□ 1.6
HDAC6-205ENST00000423941 RGPD1P0DJD0 1748 aa25.02■■□□□ 1.6
HDAC6-205ENST00000423941 EXOC5O00471 708 aa25.01■■□□□ 1.59
HDAC6-205ENST00000423941 IL13P35225 146 aa25.01■■□□□ 1.59
HDAC6-205ENST00000423941 PDE3BQ13370 1112 aa25.01■■□□□ 1.59
HDAC6-205ENST00000423941 IGSF1Q8N6C5 1336 aa25.01■■□□□ 1.59
HDAC6-205ENST00000423941 TNS2Q63HR2 1409 aa25.01■■□□□ 1.59
HDAC6-205ENST00000423941 PPP2R1AP30153 589 aa25■■□□□ 1.59
HDAC6-205ENST00000423941 BCL9O00512 1426 aa24.99■■□□□ 1.59
HDAC6-205ENST00000423941 MEGF6O75095 1541 aa24.99■■□□□ 1.59
HDAC6-205ENST00000423941 COL3A1P02461 1466 aaPredicted RBP24.99■■□□□ 1.59
HDAC6-205ENST00000423941 CNGB1Q14028 1251 aaPredicted RBP24.99■■□□□ 1.59
HDAC6-205ENST00000423941 USHBP1Q8N6Y0 703 aa24.99■■□□□ 1.59
HDAC6-205ENST00000423941 OVOS2A0A0G2JMS6 1433 aa24.98■■□□□ 1.59
HDAC6-205ENST00000423941 MARCH10Q8NA82 808 aaPredicted RBP24.98■■□□□ 1.59
HDAC6-205ENST00000423941 SHANK3Q9BYB0 1731 aa24.98■■□□□ 1.59
HDAC6-205ENST00000423941 FAM182BQ5T319 152 aa24.97■■□□□ 1.59
HDAC6-205ENST00000423941 FAM196AQ6ZSG2 479 aa24.97■■□□□ 1.59
HDAC6-205ENST00000423941 CCDC125Q86Z20 511 aa24.96■■□□□ 1.59
HDAC6-205ENST00000423941 SBF2Q86WG5 1849 aa24.96■■□□□ 1.59
HDAC6-205ENST00000423941 PLEKHG2Q9H7P9 1386 aa24.95■■□□□ 1.59
HDAC6-205ENST00000423941 RALBP1Q15311 655 aa24.95■■□□□ 1.58
HDAC6-205ENST00000423941 RAPGEF4Q8WZA2 1011 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms