RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 SH3RF1Q7Z6J0 888 aa10.47□□□□□ -0.73
LINC00458-201ENST00000423442 C1QTNF2Q9BXJ5 285 aa10.47□□□□□ -0.73
LINC00458-201ENST00000423442 MAN1A2O60476 641 aa10.46□□□□□ -0.73
LINC00458-201ENST00000423442 ARMC2Q8NEN0 867 aa10.46□□□□□ -0.73
LINC00458-201ENST00000423442 HELBQ8NG08 1087 aaPredicted RBP10.46□□□□□ -0.73
LINC00458-201ENST00000423442 POLR3EQ9NVU0 708 aa10.46□□□□□ -0.73
LINC00458-201ENST00000423442 MAGEB6P1A0A0J9YX57 407 aa10.45□□□□□ -0.74
LINC00458-201ENST00000423442 BMP2P12643 396 aa10.45□□□□□ -0.74
LINC00458-201ENST00000423442 FSHRP23945 695 aa10.45□□□□□ -0.74
LINC00458-201ENST00000423442 CLK2P49760 499 aaKnown RBP10.45□□□□□ -0.74
LINC00458-201ENST00000423442 SH3BP5LQ7L8J4 393 aa10.45□□□□□ -0.74
LINC00458-201ENST00000423442 NBPF14Q5TI25 921 aa10.44□□□□□ -0.74
LINC00458-201ENST00000423442 LINC00528Q8N1L1 170 aa10.44□□□□□ -0.74
LINC00458-201ENST00000423442 MEIOBQ8N635 442 aa10.44□□□□□ -0.74
LINC00458-201ENST00000423442 VASH1Q7L8A9 365 aaPredicted RBP10.43□□□□□ -0.74
LINC00458-201ENST00000423442 CARD14Q9BXL6 1004 aa10.43□□□□□ -0.74
LINC00458-201ENST00000423442 CEP164Q9UPV0 1460 aa10.42□□□□□ -0.74
LINC00458-201ENST00000423442 MAP4K5Q9Y4K4 846 aa10.42□□□□□ -0.74
LINC00458-201ENST00000423442 RIMBP3CA6NJZ7 1639 aa10.42□□□□□ -0.74
LINC00458-201ENST00000423442 RIMBP3BA6NNM3 1639 aa10.42□□□□□ -0.74
LINC00458-201ENST00000423442 RIMBP3Q9UFD9 1639 aa10.42□□□□□ -0.74
LINC00458-201ENST00000423442 UPP2O95045 317 aa10.41□□□□□ -0.74
LINC00458-201ENST00000423442 VSIG8P0DPA2 414 aa10.41□□□□□ -0.74
LINC00458-201ENST00000423442 CTDSPL2Q05D32 466 aa10.41□□□□□ -0.74
LINC00458-201ENST00000423442 TRMT44Q8IYL2 757 aaKnown RBP10.41□□□□□ -0.74
LINC00458-201ENST00000423442 DNMT3LQ9UJW3 386 aa10.4□□□□□ -0.74
LINC00458-201ENST00000423442 FANCD2Q9BXW9 1451 aa10.4□□□□□ -0.74
LINC00458-201ENST00000423442 SOS2Q07890 1332 aaPredicted RBP10.39□□□□□ -0.75
LINC00458-201ENST00000423442 PPFIA3O75145 1194 aa10.39□□□□□ -0.75
LINC00458-201ENST00000423442 ERFEQ4G0M1 354 aa10.39□□□□□ -0.75
LINC00458-201ENST00000423442 RSPH6AQ9H0K4 717 aa10.39□□□□□ -0.75
LINC00458-201ENST00000423442 CCDC116Q8IYX3 515 aa10.38□□□□□ -0.75
LINC00458-201ENST00000423442 EMILIN1Q9Y6C2 1016 aa10.38□□□□□ -0.75
LINC00458-201ENST00000423442 FBXO31Q5XUX0 539 aaPredicted RBP10.37□□□□□ -0.75
LINC00458-201ENST00000423442 LRRN4Q8WUT4 740 aa10.37□□□□□ -0.75
LINC00458-201ENST00000423442 TSEN34Q9BSV6 310 aaKnown RBP10.36□□□□□ -0.75
LINC00458-201ENST00000423442 WIZO95785 1651 aa10.36□□□□□ -0.75
LINC00458-201ENST00000423442 LOC100996750A0A140TA64 210 aa10.35□□□□□ -0.75
LINC00458-201ENST00000423442 CBLBQ13191 982 aa10.35□□□□□ -0.75
LINC00458-201ENST00000423442 PPP1R26Q5T8A7 1209 aaPredicted RBP10.35□□□□□ -0.75
LINC00458-201ENST00000423442 GPKOWQ92917 476 aaPredicted RBP eCLIP10.35□□□□□ -0.75
LINC00458-201ENST00000423442 KRTAP4-6Q9BYQ5 205 aa10.35□□□□□ -0.75
LINC00458-201ENST00000423442 ARHGEF11O15085 1522 aa10.34□□□□□ -0.75
LINC00458-201ENST00000423442 URB2Q14146 1524 aaKnown RBP10.34□□□□□ -0.75
LINC00458-201ENST00000423442 ARHGAP9Q9BRR9 750 aa10.33□□□□□ -0.76
LINC00458-201ENST00000423442 FIGNL2A6NMB9 653 aa10.32□□□□□ -0.76
LINC00458-201ENST00000423442 TTLL8A6PVC2 850 aa10.32□□□□□ -0.76
LINC00458-201ENST00000423442 NR6A1Q15406 480 aa10.32□□□□□ -0.76
LINC00458-201ENST00000423442 CYB5RLQ6IPT4 315 aa10.32□□□□□ -0.76
LINC00458-201ENST00000423442 PDXDC2PQ6P474 469 aa10.32□□□□□ -0.76
LINC00458-201ENST00000423442 PROCA1Q8NCQ7 364 aaPredicted RBP10.32□□□□□ -0.76
LINC00458-201ENST00000423442 FKBPLQ9UIM3 349 aa10.32□□□□□ -0.76
LINC00458-201ENST00000423442 CFTRP13569 1480 aa10.31□□□□□ -0.76
LINC00458-201ENST00000423442 KCTD15Q96SI1 283 aaPredicted RBP10.31□□□□□ -0.76
LINC00458-201ENST00000423442 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.3□□□□□ -0.76
LINC00458-201ENST00000423442 GPR161Q8N6U8 529 aaKnown RBP10.3□□□□□ -0.76
LINC00458-201ENST00000423442 PGPEP1Q9NXJ5 209 aa10.3□□□□□ -0.76
LINC00458-201ENST00000423442 PTSQ03393 145 aa10.29□□□□□ -0.76
LINC00458-201ENST00000423442 SKIV2LQ15477 1246 aaKnown RBP10.29□□□□□ -0.76
LINC00458-201ENST00000423442 Q6ZVU0 165 aa10.29□□□□□ -0.76
LINC00458-201ENST00000423442 SLC10A4Q96EP9 437 aa10.29□□□□□ -0.76
LINC00458-201ENST00000423442 OCSTAMPQ9BR26 566 aa10.29□□□□□ -0.76
LINC00458-201ENST00000423442 GPBP1L1Q9HC44 474 aaPredicted RBP10.29□□□□□ -0.76
LINC00458-201ENST00000423442 KRT76Q01546 638 aa10.28□□□□□ -0.76
LINC00458-201ENST00000423442 ZBTB33Q86T24 672 aa10.28□□□□□ -0.76
LINC00458-201ENST00000423442 ATP1B4Q9UN42 357 aaPredicted RBP10.28□□□□□ -0.76
LINC00458-201ENST00000423442 ZNF608Q9ULD9 1512 aaPredicted RBP10.28□□□□□ -0.76
LINC00458-201ENST00000423442 SPINT1O43278 529 aa10.27□□□□□ -0.77
LINC00458-201ENST00000423442 KCNMA1Q12791 1236 aa10.27□□□□□ -0.77
LINC00458-201ENST00000423442 AGBL1Q96MI9 1066 aa10.27□□□□□ -0.77
LINC00458-201ENST00000423442 SH3D19Q5HYK7 790 aa10.26□□□□□ -0.77
LINC00458-201ENST00000423442 INTS6LQ5JSJ4 861 aaKnown RBP10.26□□□□□ -0.77
LINC00458-201ENST00000423442 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.26□□□□□ -0.77
LINC00458-201ENST00000423442 FAM117AQ9C073 453 aa10.26□□□□□ -0.77
LINC00458-201ENST00000423442 KDM4CQ9H3R0 1056 aa10.26□□□□□ -0.77
LINC00458-201ENST00000423442 AP1G2O75843 785 aa10.25□□□□□ -0.77
LINC00458-201ENST00000423442 GSK3AP49840 483 aa10.25□□□□□ -0.77
LINC00458-201ENST00000423442 EPS8L1Q8TE68 723 aa10.25□□□□□ -0.77
LINC00458-201ENST00000423442 PPP2R2DQ66LE6 453 aa10.24□□□□□ -0.77
LINC00458-201ENST00000423442 CCDC155Q8N6L0 562 aa10.24□□□□□ -0.77
LINC00458-201ENST00000423442 ADAM32Q8TC27 787 aa10.24□□□□□ -0.77
LINC00458-201ENST00000423442 CNTNAP3BQ96NU0 1288 aa10.24□□□□□ -0.77
LINC00458-201ENST00000423442 CNTNAP3Q9BZ76 1288 aa10.24□□□□□ -0.77
LINC00458-201ENST00000423442 CDV3Q9UKY7 258 aaKnown RBP10.24□□□□□ -0.77
LINC00458-201ENST00000423442 CTSOP43234 321 aaPredicted RBP10.23□□□□□ -0.77
LINC00458-201ENST00000423442 RELBQ01201 579 aa10.23□□□□□ -0.77
LINC00458-201ENST00000423442 PTK2Q05397 1052 aa10.23□□□□□ -0.77
LINC00458-201ENST00000423442 DHX9Q08211 1270 aaKnown RBP10.23□□□□□ -0.77
LINC00458-201ENST00000423442 ZC3H4Q9UPT8 1303 aaKnown RBP10.23□□□□□ -0.77
LINC00458-201ENST00000423442 IFT140Q96RY7 1462 aa10.23□□□□□ -0.77
LINC00458-201ENST00000423442 SUZ12Q15022 739 aaKnown RBP10.22□□□□□ -0.77
LINC00458-201ENST00000423442 INSM2Q96T92 566 aaPredicted RBP10.22□□□□□ -0.77
LINC00458-201ENST00000423442 TMPRSS4Q9NRS4 437 aa10.22□□□□□ -0.77
LINC00458-201ENST00000423442 ARAP1Q96P48 1450 aa10.22□□□□□ -0.77
LINC00458-201ENST00000423442 RAB15P59190 212 aa10.21□□□□□ -0.77
LINC00458-201ENST00000423442 COL25A1Q9BXS0 654 aaPredicted RBP10.21□□□□□ -0.77
LINC00458-201ENST00000423442 ZNF395Q9H8N7 513 aaPredicted RBP10.21□□□□□ -0.77
LINC00458-201ENST00000423442 HMX1Q9NP08 348 aaPredicted RBP10.21□□□□□ -0.77
LINC00458-201ENST00000423442 SLC35F4A4IF30 521 aa10.2□□□□□ -0.78
LINC00458-201ENST00000423442 KCTD17Q8N5Z5 321 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms