RNA–Protein interactions for RNA: ENST00000422788.5

CCDC66-205, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-205ENST00000422788 SPINT1O43278 529 aa9.25□□□□□ -0.93
CCDC66-205ENST00000422788 KRT76Q01546 638 aa9.25□□□□□ -0.93
CCDC66-205ENST00000422788 PTSQ03393 145 aa9.25□□□□□ -0.93
CCDC66-205ENST00000422788 NANOS1Q8WY41 292 aaKnown RBP9.25□□□□□ -0.93
CCDC66-205ENST00000422788 PGPEP1Q9NXJ5 209 aa9.25□□□□□ -0.93
CCDC66-205ENST00000422788 LOC100996750A0A140TA64 210 aa9.24□□□□□ -0.93
CCDC66-205ENST00000422788 CTDSPL2Q05D32 466 aa9.24□□□□□ -0.93
CCDC66-205ENST00000422788 GPR161Q8N6U8 529 aaKnown RBP9.24□□□□□ -0.93
CCDC66-205ENST00000422788 CARD14Q9BXL6 1004 aa9.24□□□□□ -0.93
CCDC66-205ENST00000422788 KRTAP4-6Q9BYQ5 205 aa9.24□□□□□ -0.93
CCDC66-205ENST00000422788 CDV3Q9UKY7 258 aaKnown RBP9.24□□□□□ -0.93
CCDC66-205ENST00000422788 SLC24A3Q9HC58 644 aa9.23□□□□□ -0.93
CCDC66-205ENST00000422788 FKBPLQ9UIM3 349 aa9.23□□□□□ -0.93
CCDC66-205ENST00000422788 ARHGAP9Q9BRR9 750 aa9.22□□□□□ -0.93
CCDC66-205ENST00000422788 POLR3EQ9NVU0 708 aa9.22□□□□□ -0.93
CCDC66-205ENST00000422788 ZC3H4Q9UPT8 1303 aaKnown RBP9.22□□□□□ -0.93
CCDC66-205ENST00000422788 DHX9Q08211 1270 aaKnown RBP9.21□□□□□ -0.94
CCDC66-205ENST00000422788 CBLBQ13191 982 aa9.21□□□□□ -0.94
CCDC66-205ENST00000422788 KCTD15Q96SI1 283 aaPredicted RBP9.21□□□□□ -0.94
CCDC66-205ENST00000422788 SLC35F4A4IF30 521 aa9.2□□□□□ -0.94
CCDC66-205ENST00000422788 CCDC155Q8N6L0 562 aa9.2□□□□□ -0.94
CCDC66-205ENST00000422788 SLC10A4Q96EP9 437 aa9.19□□□□□ -0.94
CCDC66-205ENST00000422788 CNTNAP3BQ96NU0 1288 aa9.19□□□□□ -0.94
CCDC66-205ENST00000422788 CNTNAP3Q9BZ76 1288 aa9.19□□□□□ -0.94
CCDC66-205ENST00000422788 GPSM3Q9Y4H4 160 aa9.19□□□□□ -0.94
CCDC66-205ENST00000422788 LRRN4Q8WUT4 740 aa9.18□□□□□ -0.94
CCDC66-205ENST00000422788 OCSTAMPQ9BR26 566 aa9.18□□□□□ -0.94
CCDC66-205ENST00000422788 FIGNL2A6NMB9 653 aa9.17□□□□□ -0.94
CCDC66-205ENST00000422788 SKIV2LQ15477 1246 aaKnown RBP9.17□□□□□ -0.94
CCDC66-205ENST00000422788 INTS6LQ5JSJ4 861 aaKnown RBP9.17□□□□□ -0.94
CCDC66-205ENST00000422788 PPP2R2DQ66LE6 453 aa9.17□□□□□ -0.94
CCDC66-205ENST00000422788 ZBTB33Q86T24 672 aa9.17□□□□□ -0.94
CCDC66-205ENST00000422788 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.17□□□□□ -0.94
CCDC66-205ENST00000422788 COL25A1Q9BXS0 654 aaPredicted RBP9.17□□□□□ -0.94
CCDC66-205ENST00000422788 SLURP2P0DP57 97 aa9.16□□□□□ -0.94
CCDC66-205ENST00000422788 FBXO31Q5XUX0 539 aaPredicted RBP9.16□□□□□ -0.94
CCDC66-205ENST00000422788 ADAMTS8Q9UP79 889 aa9.16□□□□□ -0.94
CCDC66-205ENST00000422788 ITGA6P23229 1130 aa9.15□□□□□ -0.94
CCDC66-205ENST00000422788 PTK2Q05397 1052 aa9.15□□□□□ -0.94
CCDC66-205ENST00000422788 RNFT1Q5M7Z0 435 aa9.15□□□□□ -0.94
CCDC66-205ENST00000422788 RNF225M0QZC1 329 aaPredicted RBP9.14□□□□□ -0.95
CCDC66-205ENST00000422788 CTSOP43234 321 aaPredicted RBP9.14□□□□□ -0.95
CCDC66-205ENST00000422788 RASSF7Q02833 373 aa9.14□□□□□ -0.95
CCDC66-205ENST00000422788 NR6A1Q15406 480 aa9.14□□□□□ -0.95
CCDC66-205ENST00000422788 SH3D19Q5HYK7 790 aa9.14□□□□□ -0.95
CCDC66-205ENST00000422788 ZNF385CQ66K41 422 aaPredicted RBP9.14□□□□□ -0.95
CCDC66-205ENST00000422788 TMEM151AQ8N4L1 468 aa9.14□□□□□ -0.95
CCDC66-205ENST00000422788 KCTD17Q8N5Z5 321 aa9.13□□□□□ -0.95
CCDC66-205ENST00000422788 AGBL1Q96MI9 1066 aa9.13□□□□□ -0.95
CCDC66-205ENST00000422788 SUZ12Q15022 739 aaKnown RBP9.12□□□□□ -0.95
CCDC66-205ENST00000422788 NBPF20Q3BBV1 942 aa9.12□□□□□ -0.95
CCDC66-205ENST00000422788 ADAM32Q8TC27 787 aa9.12□□□□□ -0.95
CCDC66-205ENST00000422788 RNF217Q8TC41 542 aa9.12□□□□□ -0.95
CCDC66-205ENST00000422788 INSM2Q96T92 566 aaPredicted RBP9.12□□□□□ -0.95
CCDC66-205ENST00000422788 SENP3-EIF4A1A0A087X0R7 540 aa9.11□□□□□ -0.95
CCDC66-205ENST00000422788 GDF11O95390 407 aa9.11□□□□□ -0.95
CCDC66-205ENST00000422788 RELBQ01201 579 aa9.11□□□□□ -0.95
CCDC66-205ENST00000422788 SV2AQ7L0J3 742 aa9.11□□□□□ -0.95
CCDC66-205ENST00000422788 VWA5B2Q8N398 1253 aa9.11□□□□□ -0.95
CCDC66-205ENST00000422788 ARHGEF15O94989 841 aa9.1□□□□□ -0.95
CCDC66-205ENST00000422788 PROCA1Q8NCQ7 364 aaPredicted RBP9.1□□□□□ -0.95
CCDC66-205ENST00000422788 LILRA1O75019 489 aa9.09□□□□□ -0.95
CCDC66-205ENST00000422788 SVOPQ8N4V2 548 aa9.09□□□□□ -0.95
CCDC66-205ENST00000422788 KDF1Q8NAX2 398 aaPredicted RBP9.09□□□□□ -0.95
CCDC66-205ENST00000422788 ADH1AP07327 375 aa9.08□□□□□ -0.96
CCDC66-205ENST00000422788 ZNF784Q8NCA9 323 aaPredicted RBP9.08□□□□□ -0.96
CCDC66-205ENST00000422788 DDRGK1Q96HY6 314 aa9.08□□□□□ -0.96
CCDC66-205ENST00000422788 POLMQ9NP87 494 aaPredicted RBP9.08□□□□□ -0.96
CCDC66-205ENST00000422788 ESPNB1AK53 854 aa9.07□□□□□ -0.96
CCDC66-205ENST00000422788 ADD1P35611 737 aaKnown RBP9.07□□□□□ -0.96
CCDC66-205ENST00000422788 PNMA1Q8ND90 353 aa9.07□□□□□ -0.96
CCDC66-205ENST00000422788 WHAMMQ8TF30 809 aa9.07□□□□□ -0.96
CCDC66-205ENST00000422788 ZNF395Q9H8N7 513 aaPredicted RBP9.07□□□□□ -0.96
CCDC66-205ENST00000422788 TMPRSS4Q9NRS4 437 aa9.07□□□□□ -0.96
CCDC66-205ENST00000422788 CDC14CA4D256 554 aa9.06□□□□□ -0.96
CCDC66-205ENST00000422788 ERVH48-1M5A8F1 160 aa9.06□□□□□ -0.96
CCDC66-205ENST00000422788 PTGIRP43119 386 aa9.06□□□□□ -0.96
CCDC66-205ENST00000422788 FOXD4L5Q5VV16 416 aaPredicted RBP9.06□□□□□ -0.96
CCDC66-205ENST00000422788 EPS8L1Q8TE68 723 aa9.06□□□□□ -0.96
CCDC66-205ENST00000422788 AP1G2O75843 785 aa9.05□□□□□ -0.96
CCDC66-205ENST00000422788 SEPT12Q8IYM1 358 aa9.05□□□□□ -0.96
CCDC66-205ENST00000422788 FAM117AQ9C073 453 aa9.05□□□□□ -0.96
CCDC66-205ENST00000422788 KDM4CQ9H3R0 1056 aa9.05□□□□□ -0.96
CCDC66-205ENST00000422788 HMX1Q9NP08 348 aaPredicted RBP9.05□□□□□ -0.96
CCDC66-205ENST00000422788 SRSF11Q05519 484 aaKnown RBP9.04□□□□□ -0.96
CCDC66-205ENST00000422788 LYSMD3Q7Z3D4 306 aa9.03□□□□□ -0.96
CCDC66-205ENST00000422788 DZIP3Q86Y13 1208 aaKnown RBP9.03□□□□□ -0.96
CCDC66-205ENST00000422788 TRIM52Q96A61 297 aa9.03□□□□□ -0.96
CCDC66-205ENST00000422788 DNMT3AQ9Y6K1 912 aaPredicted RBP9.03□□□□□ -0.96
CCDC66-205ENST00000422788 ADAMTS2O95450 1211 aa9.02□□□□□ -0.97
CCDC66-205ENST00000422788 USP17L8P0C7I0 530 aa9.02□□□□□ -0.97
CCDC66-205ENST00000422788 RNF144AP50876 292 aaPredicted RBP9.02□□□□□ -0.97
CCDC66-205ENST00000422788 KANK3Q6NY19 840 aa9.02□□□□□ -0.97
CCDC66-205ENST00000422788 GMCL1Q96IK5 515 aa9.01□□□□□ -0.97
CCDC66-205ENST00000422788 GPBP1L1Q9HC44 474 aaPredicted RBP9.01□□□□□ -0.97
CCDC66-205ENST00000422788 IGHA1P01876 353 aa9□□□□□ -0.97
CCDC66-205ENST00000422788 GAS6Q14393 721 aa9□□□□□ -0.97
CCDC66-205ENST00000422788 SCARF2Q96GP6 870 aaPredicted RBP9□□□□□ -0.97
CCDC66-205ENST00000422788 CUEDC1Q9NWM3 386 aaPredicted RBP9□□□□□ -0.97
CCDC66-205ENST00000422788 IRS1P35568 1242 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms