RNA–Protein interactions for RNA: ENST00000422788.5

CCDC66-205, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-205ENST00000422788 AEBP2Q6ZN18 517 aaPredicted RBP27.68■■■□□ 2.02
CCDC66-205ENST00000422788 CHIC1Q5VXU3 224 aa26.25■■□□□ 1.79
CCDC66-205ENST00000422788 SENP3Q9H4L4 574 aaPredicted RBP23.65■■□□□ 1.38
CCDC66-205ENST00000422788 PHF23Q9BUL5 403 aaPredicted RBP23.31■■□□□ 1.32
CCDC66-205ENST00000422788 FOXD1Q16676 465 aa22.03■■□□□ 1.12
CCDC66-205ENST00000422788 PLPPR3Q6T4P5 718 aa20.94■□□□□ 0.94
CCDC66-205ENST00000422788 MSH5O43196 834 aa20.66■□□□□ 0.9
CCDC66-205ENST00000422788 PPP6R1Q9UPN7 881 aa20.54■□□□□ 0.88
CCDC66-205ENST00000422788 PIAS4Q8N2W9 510 aaPredicted RBP20.53■□□□□ 0.88
CCDC66-205ENST00000422788 ADRA2BP18089 450 aa20.44■□□□□ 0.86
CCDC66-205ENST00000422788 POTEDQ86YR6 584 aa20.25■□□□□ 0.83
CCDC66-205ENST00000422788 MAPK8IP2Q13387 824 aaPredicted RBP18.79■□□□□ 0.6
CCDC66-205ENST00000422788 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
CCDC66-205ENST00000422788 DMRT2Q9Y5R5 561 aa18.75■□□□□ 0.59
CCDC66-205ENST00000422788 PPP4R3CPQ6ZMV5 832 aa18.32■□□□□ 0.52
CCDC66-205ENST00000422788 HOXD11P31277 338 aaPredicted RBP18.06■□□□□ 0.48
CCDC66-205ENST00000422788 CNKSR2Q8WXI2 1034 aa18.02■□□□□ 0.48
CCDC66-205ENST00000422788 RNF216Q9NWF9 866 aaPredicted RBP17.89■□□□□ 0.45
CCDC66-205ENST00000422788 DCAF8L1A6NGE4 600 aa17.85■□□□□ 0.45
CCDC66-205ENST00000422788 CACNB1Q02641 598 aaPredicted RBP17.7■□□□□ 0.42
CCDC66-205ENST00000422788 RNF39Q9H2S5 420 aa17.64■□□□□ 0.41
CCDC66-205ENST00000422788 NCBP3Q53F19 620 aaKnown RBP17.61■□□□□ 0.41
CCDC66-205ENST00000422788 DNAJC5BQ9UF47 199 aa17.54■□□□□ 0.4
CCDC66-205ENST00000422788 C1QBPQ07021 282 aaKnown RBP17.39■□□□□ 0.37
CCDC66-205ENST00000422788 NPM3O75607 178 aaKnown RBP17.35■□□□□ 0.37
CCDC66-205ENST00000422788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.12■□□□□ 0.33
CCDC66-205ENST00000422788 KCNA4P22459 653 aa16.93■□□□□ 0.3
CCDC66-205ENST00000422788 U3KPZ7 1027 aaPredicted RBP16.79■□□□□ 0.28
CCDC66-205ENST00000422788 SLC4A2P04920 1241 aa16.6■□□□□ 0.25
CCDC66-205ENST00000422788 SPINK5Q9NQ38 1064 aaPredicted RBP16.53■□□□□ 0.24
CCDC66-205ENST00000422788 CAPN15O75808 1086 aa16.48■□□□□ 0.23
CCDC66-205ENST00000422788 DSG3P32926 999 aa16.48■□□□□ 0.23
CCDC66-205ENST00000422788 APLP2Q06481 763 aa16.33■□□□□ 0.2
CCDC66-205ENST00000422788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.32■□□□□ 0.2
CCDC66-205ENST00000422788 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
CCDC66-205ENST00000422788 ZNF219Q9P2Y4 722 aaPredicted RBP16.23■□□□□ 0.19
CCDC66-205ENST00000422788 SAMD1Q6SPF0 538 aaPredicted RBP16.21■□□□□ 0.19
CCDC66-205ENST00000422788 TRHP20396 242 aaPredicted RBP16.18■□□□□ 0.18
CCDC66-205ENST00000422788 ABCB7O75027 752 aa16.07■□□□□ 0.16
CCDC66-205ENST00000422788 MYCNP04198 464 aaPredicted RBP16.06■□□□□ 0.16
CCDC66-205ENST00000422788 SLC4A1APQ9BWU0 796 aaKnown RBP15.97■□□□□ 0.15
CCDC66-205ENST00000422788 POTEHQ6S545 545 aa15.85■□□□□ 0.13
CCDC66-205ENST00000422788 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
CCDC66-205ENST00000422788 POLA2Q14181 598 aa15.79■□□□□ 0.12
CCDC66-205ENST00000422788 RBM42Q9BTD8 480 aaKnown RBP15.72■□□□□ 0.11
CCDC66-205ENST00000422788 ATF5Q9Y2D1 282 aaPredicted RBP15.66■□□□□ 0.1
CCDC66-205ENST00000422788 ZBTB22O15209 634 aa15.59■□□□□ 0.09
CCDC66-205ENST00000422788 ZBTB12Q9Y330 459 aaPredicted RBP15.51■□□□□ 0.07
CCDC66-205ENST00000422788 ATXN8OSP0DMR3 200 aa15.43■□□□□ 0.06
CCDC66-205ENST00000422788 CHRDL2Q6WN34 429 aa15.39■□□□□ 0.05
CCDC66-205ENST00000422788 AKT1S1Q96B36 256 aa15.36■□□□□ 0.05
CCDC66-205ENST00000422788 OSCARQ8IYS5 282 aa15.26■□□□□ 0.03
CCDC66-205ENST00000422788 REM2Q8IYK8 340 aaPredicted RBP15.19■□□□□ 0.02
CCDC66-205ENST00000422788 FBLN2P98095 1184 aa15.05■□□□□ -0
CCDC66-205ENST00000422788 SPDYE2BA6NHP3 402 aa15.03■□□□□ -0
CCDC66-205ENST00000422788 SPDYE6P0CI01 402 aa15.03■□□□□ -0
CCDC66-205ENST00000422788 SPDYE2Q495Y8 402 aa15.03■□□□□ -0
CCDC66-205ENST00000422788 PITPNM1O00562 1244 aa15.02■□□□□ -0
CCDC66-205ENST00000422788 PIP4P2Q8N4L2 257 aa15.01□□□□□ -0.01
CCDC66-205ENST00000422788 MKRN4PQ13434 485 aaPredicted RBP14.97□□□□□ -0.01
CCDC66-205ENST00000422788 FXR2P51116 673 aaKnown RBP eCLIP14.94□□□□□ -0.02
CCDC66-205ENST00000422788 SP7Q8TDD2 431 aaPredicted RBP14.84□□□□□ -0.03
CCDC66-205ENST00000422788 SSUH2Q9Y2M2 353 aa14.83□□□□□ -0.04
CCDC66-205ENST00000422788 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
CCDC66-205ENST00000422788 ZNF692Q9BU19 519 aaPredicted RBP14.79□□□□□ -0.04
CCDC66-205ENST00000422788 SPDYE1Q8NFV5 336 aaPredicted RBP14.75□□□□□ -0.05
CCDC66-205ENST00000422788 HAX1O00165 279 aa14.71□□□□□ -0.05
CCDC66-205ENST00000422788 CLEC11AQ9Y240 323 aa14.65□□□□□ -0.06
CCDC66-205ENST00000422788 PRKAR2AP13861 404 aaKnown RBP14.61□□□□□ -0.07
CCDC66-205ENST00000422788 PABPN1Q86U42 306 aaKnown RBP eCLIP14.56□□□□□ -0.08
CCDC66-205ENST00000422788 EVX2Q03828 476 aa14.55□□□□□ -0.08
CCDC66-205ENST00000422788 EHMT2Q96KQ7 1210 aa14.48□□□□□ -0.09
CCDC66-205ENST00000422788 C19orf67A6NJJ6 358 aa14.46□□□□□ -0.09
CCDC66-205ENST00000422788 PRR29P0C7W0 189 aa14.45□□□□□ -0.1
CCDC66-205ENST00000422788 CHADLQ6NUI6 762 aa14.4□□□□□ -0.1
CCDC66-205ENST00000422788 FARP1Q9Y4F1 1045 aaPredicted RBP14.24□□□□□ -0.13
CCDC66-205ENST00000422788 GABBR2O75899 941 aa14.23□□□□□ -0.13
CCDC66-205ENST00000422788 SPDYE4A6NLX3 237 aa14.2□□□□□ -0.14
CCDC66-205ENST00000422788 STAG3Q9UJ98 1225 aa14.2□□□□□ -0.14
CCDC66-205ENST00000422788 CD44P16070 742 aaKnown RBP14.14□□□□□ -0.15
CCDC66-205ENST00000422788 CREBZFQ9NS37 354 aa14.11□□□□□ -0.15
CCDC66-205ENST00000422788 CLCN6P51797 869 aa14.08□□□□□ -0.16
CCDC66-205ENST00000422788 ZNF579Q8NAF0 562 aaKnown RBP13.97□□□□□ -0.17
CCDC66-205ENST00000422788 PROM2Q8N271 834 aa13.95□□□□□ -0.18
CCDC66-205ENST00000422788 POTEIP0CG38 1075 aa13.94□□□□□ -0.18
CCDC66-205ENST00000422788 ZRANB1Q9UGI0 708 aa13.92□□□□□ -0.18
CCDC66-205ENST00000422788 MNX1P50219 401 aaPredicted RBP13.9□□□□□ -0.18
CCDC66-205ENST00000422788 LHX8Q68G74 356 aa13.9□□□□□ -0.18
CCDC66-205ENST00000422788 NPM1P06748 294 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCDC66-205ENST00000422788 PAK3O75914 559 aaPredicted RBP13.8□□□□□ -0.2
CCDC66-205ENST00000422788 DCBLD2Q96PD2 775 aa13.8□□□□□ -0.2
CCDC66-205ENST00000422788 GALR2O43603 387 aaPredicted RBP13.75□□□□□ -0.21
CCDC66-205ENST00000422788 PHF12Q96QT6 1004 aa13.71□□□□□ -0.21
CCDC66-205ENST00000422788 CCDC61Q9Y6R9 512 aa13.55□□□□□ -0.24
CCDC66-205ENST00000422788 MIER1Q8N108 512 aa13.54□□□□□ -0.24
CCDC66-205ENST00000422788 MS4A3Q96HJ5 214 aa13.54□□□□□ -0.24
CCDC66-205ENST00000422788 PLEKHG5O94827 1062 aa13.53□□□□□ -0.24
CCDC66-205ENST00000422788 ASTLQ6HA08 431 aaPredicted RBP13.53□□□□□ -0.24
CCDC66-205ENST00000422788 TSPYL2Q9H2G4 693 aaPredicted RBP13.53□□□□□ -0.24
CCDC66-205ENST00000422788 PELP1Q8IZL8 1130 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms