RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 LARP1Q6PKG0 1096 aaKnown RBP30.68■■■□□ 2.5
TRAF4-204ENST00000422344 BARGINQ6ZT62 677 aa30.68■■■□□ 2.5
TRAF4-204ENST00000422344 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.68■■■□□ 2.5
TRAF4-204ENST00000422344 CAMTA1Q9Y6Y1 1673 aa30.68■■■□□ 2.5
TRAF4-204ENST00000422344 KCNH5Q8NCM2 988 aa30.67■■■□□ 2.5
TRAF4-204ENST00000422344 A0A1W2PP64 1363 aa30.65■■■□□ 2.5
TRAF4-204ENST00000422344 TCP11L2Q8N4U5 519 aa30.64■■■□□ 2.5
TRAF4-204ENST00000422344 LMO7Q8WWI1 1683 aa30.64■■■□□ 2.5
TRAF4-204ENST00000422344 EDC4Q6P2E9 1401 aaKnown RBP30.64■■■□□ 2.49
TRAF4-204ENST00000422344 SOX12O15370 315 aa30.63■■■□□ 2.49
TRAF4-204ENST00000422344 CDCA8Q53HL2 280 aa30.63■■■□□ 2.49
TRAF4-204ENST00000422344 AATKQ6ZMQ8 1374 aa30.61■■■□□ 2.49
TRAF4-204ENST00000422344 NME9Q86XW9 330 aa30.6■■■□□ 2.49
TRAF4-204ENST00000422344 PARD3Q8TEW0 1356 aa30.6■■■□□ 2.49
TRAF4-204ENST00000422344 USP31Q70CQ4 1352 aa30.58■■■□□ 2.49
TRAF4-204ENST00000422344 COL5A2P05997 1499 aaPredicted RBP30.57■■■□□ 2.48
TRAF4-204ENST00000422344 THRAP3Q9Y2W1 955 aaKnown RBP30.57■■■□□ 2.48
TRAF4-204ENST00000422344 ARHGEF25Q86VW2 580 aa30.54■■■□□ 2.48
TRAF4-204ENST00000422344 USP54Q70EL1 1684 aa30.54■■■□□ 2.48
TRAF4-204ENST00000422344 RREB1Q92766 1687 aa30.54■■■□□ 2.48
TRAF4-204ENST00000422344 ANKRD36BQ8N2N9 1353 aa30.54■■■□□ 2.48
TRAF4-204ENST00000422344 NFAT5O94916 1531 aa30.53■■■□□ 2.48
TRAF4-204ENST00000422344 NUP188Q5SRE5 1749 aa30.51■■■□□ 2.47
TRAF4-204ENST00000422344 CRB1P82279 1406 aa30.51■■■□□ 2.47
TRAF4-204ENST00000422344 NBPF14Q5TI25 921 aa30.51■■■□□ 2.47
TRAF4-204ENST00000422344 PARP4Q9UKK3 1724 aaKnown RBP30.5■■■□□ 2.47
TRAF4-204ENST00000422344 EIF4G2P78344 907 aaKnown RBP eCLIP30.5■■■□□ 2.47
TRAF4-204ENST00000422344 COL18A1P39060 1754 aa30.5■■■□□ 2.47
TRAF4-204ENST00000422344 TOM1L2Q6ZVM7 507 aa30.48■■■□□ 2.47
TRAF4-204ENST00000422344 AXIN2Q9Y2T1 843 aa30.47■■■□□ 2.47
TRAF4-204ENST00000422344 OVOS2A0A0J9YW53 1432 aa30.47■■■□□ 2.47
TRAF4-204ENST00000422344 OVOS2Q6IE36 1432 aa30.47■■■□□ 2.47
TRAF4-204ENST00000422344 CSB-PGBD3P0DP91 1061 aa30.46■■■□□ 2.47
TRAF4-204ENST00000422344 ABCC6O95255 1503 aa30.46■■■□□ 2.47
TRAF4-204ENST00000422344 WDR17Q8IZU2 1322 aa30.46■■■□□ 2.47
TRAF4-204ENST00000422344 COG3Q96JB2 828 aa30.45■■■□□ 2.47
TRAF4-204ENST00000422344 C11orf95C9JLR9 678 aaPredicted RBP30.43■■■□□ 2.46
TRAF4-204ENST00000422344 OVOS2A0A0G2JMS6 1433 aa30.42■■■□□ 2.46
TRAF4-204ENST00000422344 HSPA5P11021 654 aaKnown RBP30.42■■■□□ 2.46
TRAF4-204ENST00000422344 POLR3GLQ9BT43 218 aa30.42■■■□□ 2.46
TRAF4-204ENST00000422344 RGPD5Q99666 1765 aa30.41■■■□□ 2.46
TRAF4-204ENST00000422344 LTN1O94822 1766 aa30.41■■■□□ 2.46
TRAF4-204ENST00000422344 DDB1Q16531 1140 aa30.4■■■□□ 2.46
TRAF4-204ENST00000422344 MYOM1P52179 1685 aa30.39■■■□□ 2.46
TRAF4-204ENST00000422344 PEAK1Q9H792 1746 aa30.39■■■□□ 2.46
TRAF4-204ENST00000422344 LRRC37A3O60309 1634 aa30.38■■■□□ 2.45
TRAF4-204ENST00000422344 SBF2Q86WG5 1849 aa30.37■■■□□ 2.45
TRAF4-204ENST00000422344 CARD10Q9BWT7 1032 aa30.35■■■□□ 2.45
TRAF4-204ENST00000422344 SPON1Q9HCB6 807 aa30.35■■■□□ 2.45
TRAF4-204ENST00000422344 GGNBP2Q9H3C7 697 aa30.34■■■□□ 2.45
TRAF4-204ENST00000422344 PPP1R1BQ9UD71 204 aaPredicted RBP30.34■■■□□ 2.45
TRAF4-204ENST00000422344 FYB1O15117 783 aa30.33■■■□□ 2.45
TRAF4-204ENST00000422344 PLSCR1O15162 318 aa30.33■■■□□ 2.45
TRAF4-204ENST00000422344 KCNQ2O43526 872 aa30.33■■■□□ 2.45
TRAF4-204ENST00000422344 PTF1AQ7RTS3 328 aa30.33■■■□□ 2.45
TRAF4-204ENST00000422344 ERBB3P21860 1342 aa30.32■■■□□ 2.44
TRAF4-204ENST00000422344 CDCA7Q9BWT1 371 aaPredicted RBP30.32■■■□□ 2.44
TRAF4-204ENST00000422344 NSD3Q9BZ95 1437 aa30.31■■■□□ 2.44
TRAF4-204ENST00000422344 KIF20BQ96Q89 1820 aa30.31■■■□□ 2.44
TRAF4-204ENST00000422344 CCDC7Q96M83 1385 aa30.31■■■□□ 2.44
TRAF4-204ENST00000422344 BCL11BQ9C0K0 894 aaPredicted RBP30.31■■■□□ 2.44
TRAF4-204ENST00000422344 WNK3Q9BYP7 1800 aa30.31■■■□□ 2.44
TRAF4-204ENST00000422344 MARCH10Q8NA82 808 aaPredicted RBP30.3■■■□□ 2.44
TRAF4-204ENST00000422344 NLRP2Q9NX02 1062 aa30.3■■■□□ 2.44
TRAF4-204ENST00000422344 RGPD3A6NKT7 1758 aaPredicted RBP30.3■■■□□ 2.44
TRAF4-204ENST00000422344 RGPD4Q7Z3J3 1758 aa30.3■■■□□ 2.44
TRAF4-204ENST00000422344 AMPHP49418 695 aa30.29■■■□□ 2.44
TRAF4-204ENST00000422344 ANKRD24Q8TF21 1146 aa30.29■■■□□ 2.44
TRAF4-204ENST00000422344 IP6K1Q92551 441 aa30.29■■■□□ 2.44
TRAF4-204ENST00000422344 CARD14Q9BXL6 1004 aa30.29■■■□□ 2.44
TRAF4-204ENST00000422344 MAP3K19Q56UN5 1328 aa30.27■■■□□ 2.44
TRAF4-204ENST00000422344 ANO8Q9HCE9 1232 aaPredicted RBP30.27■■■□□ 2.44
TRAF4-204ENST00000422344 FBLN1P23142 703 aa30.24■■■□□ 2.43
TRAF4-204ENST00000422344 YY1P25490 414 aa30.24■■■□□ 2.43
TRAF4-204ENST00000422344 LTV1Q96GA3 475 aaPredicted RBP30.24■■■□□ 2.43
TRAF4-204ENST00000422344 PROM2Q8N271 834 aa30.23■■■□□ 2.43
TRAF4-204ENST00000422344 CGNL1Q0VF96 1302 aa30.22■■■□□ 2.43
TRAF4-204ENST00000422344 HOXC9P31274 260 aa30.22■■■□□ 2.43
TRAF4-204ENST00000422344 RTL1A6NKG5 1358 aa30.22■■■□□ 2.43
TRAF4-204ENST00000422344 BCL9O00512 1426 aa30.22■■■□□ 2.43
TRAF4-204ENST00000422344 EXOC5O00471 708 aa30.21■■■□□ 2.43
TRAF4-204ENST00000422344 RRS1Q15050 365 aaKnown RBP30.21■■■□□ 2.43
TRAF4-204ENST00000422344 FAM208AQ9UK61 1670 aaKnown RBP30.2■■■□□ 2.42
TRAF4-204ENST00000422344 PDGFDQ9GZP0 370 aaPredicted RBP30.19■■■□□ 2.42
TRAF4-204ENST00000422344 CASZ1Q86V15 1759 aa30.18■■■□□ 2.42
TRAF4-204ENST00000422344 DCAF8L1A6NGE4 600 aa30.18■■■□□ 2.42
TRAF4-204ENST00000422344 IL2RBP14784 551 aa30.17■■■□□ 2.42
TRAF4-204ENST00000422344 ZBTB7AO95365 584 aa30.15■■■□□ 2.42
TRAF4-204ENST00000422344 TXNRD1Q16881 649 aa30.15■■■□□ 2.42
TRAF4-204ENST00000422344 PANK3Q9H999 370 aa30.15■■■□□ 2.42
TRAF4-204ENST00000422344 TNS2Q63HR2 1409 aa30.14■■■□□ 2.42
TRAF4-204ENST00000422344 SMG6Q86US8 1419 aaKnown RBP30.14■■■□□ 2.42
TRAF4-204ENST00000422344 STK32BQ9NY57 414 aa30.12■■■□□ 2.41
TRAF4-204ENST00000422344 FLT4P35916 1363 aa30.12■■■□□ 2.41
TRAF4-204ENST00000422344 KIF24Q5T7B8 1368 aa30.12■■■□□ 2.41
TRAF4-204ENST00000422344 SLC15A2Q16348 729 aa30.09■■■□□ 2.41
TRAF4-204ENST00000422344 ATF5Q9Y2D1 282 aaPredicted RBP30.09■■■□□ 2.41
TRAF4-204ENST00000422344 ACSBG1Q96GR2 724 aa30.08■■■□□ 2.41
TRAF4-204ENST00000422344 INSRP06213 1382 aa30.07■■■□□ 2.4
TRAF4-204ENST00000422344 KIF7Q2M1P5 1343 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms