RNA–Protein interactions for RNA: ENST00000420696.6

PBX1-203, Transcript of PBX homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-203ENST00000420696 SMTNL1A8MU46 457 aa13.8□□□□□ -0.2
PBX1-203ENST00000420696 WASF1Q92558 559 aa13.8□□□□□ -0.2
PBX1-203ENST00000420696 EIF5P55010 431 aaKnown RBP13.8□□□□□ -0.2
PBX1-203ENST00000420696 RIPK4P57078 832 aa13.8□□□□□ -0.2
PBX1-203ENST00000420696 KIF6Q6ZMV9 814 aa13.8□□□□□ -0.2
PBX1-203ENST00000420696 TMOD2Q9NZR1 351 aa13.8□□□□□ -0.2
PBX1-203ENST00000420696 MATR3P43243 847 aaKnown RBP eCLIP13.8□□□□□ -0.2
PBX1-203ENST00000420696 KRT85P78386 507 aa13.8□□□□□ -0.2
PBX1-203ENST00000420696 BMS1Q14692 1282 aaKnown RBP13.8□□□□□ -0.2
PBX1-203ENST00000420696 UBXN4Q92575 508 aa13.8□□□□□ -0.2
PBX1-203ENST00000420696 POLR3GO15318 223 aaPredicted RBP13.8□□□□□ -0.2
PBX1-203ENST00000420696 ATP2B2Q01814 1243 aa13.8□□□□□ -0.2
PBX1-203ENST00000420696 GIGYF2Q6Y7W6 1299 aaKnown RBP13.8□□□□□ -0.2
PBX1-203ENST00000420696 ZNF76P36508 570 aa13.79□□□□□ -0.2
PBX1-203ENST00000420696 BCCIPQ9P287 314 aaKnown RBP eCLIP13.79□□□□□ -0.2
PBX1-203ENST00000420696 FMN1Q68DA7 1419 aa13.79□□□□□ -0.2
PBX1-203ENST00000420696 LRRC45Q96CN5 670 aa13.79□□□□□ -0.2
PBX1-203ENST00000420696 HMGB1P09429 215 aaKnown RBP13.79□□□□□ -0.2
PBX1-203ENST00000420696 TSNARE1Q96NA8 513 aa13.79□□□□□ -0.2
PBX1-203ENST00000420696 SSBP05455 408 aaKnown RBP eCLIP13.78□□□□□ -0.2
PBX1-203ENST00000420696 KIAA1328Q86T90 577 aa13.78□□□□□ -0.2
PBX1-203ENST00000420696 STAC3Q96MF2 364 aa13.78□□□□□ -0.2
PBX1-203ENST00000420696 ZNF287Q9HBT7 754 aa13.78□□□□□ -0.2
PBX1-203ENST00000420696 TMCO3Q6UWJ1 677 aa13.78□□□□□ -0.2
PBX1-203ENST00000420696 CTNNA3Q9UI47 895 aa13.78□□□□□ -0.2
PBX1-203ENST00000420696 SPA17Q15506 151 aa13.78□□□□□ -0.2
PBX1-203ENST00000420696 CCDC69A6NI79 296 aa13.78□□□□□ -0.2
PBX1-203ENST00000420696 PLIN1O60240 522 aa13.78□□□□□ -0.2
PBX1-203ENST00000420696 SPECC1LQ69YQ0 1117 aa13.77□□□□□ -0.2
PBX1-203ENST00000420696 CCDC150Q8NCX0 1101 aa13.77□□□□□ -0.2
PBX1-203ENST00000420696 SREK1Q8WXA9 508 aaKnown RBP13.77□□□□□ -0.2
PBX1-203ENST00000420696 DDX11Q96FC9 970 aa13.77□□□□□ -0.2
PBX1-203ENST00000420696 ME1P48163 572 aa13.77□□□□□ -0.2
PBX1-203ENST00000420696 NLRP2Q9NX02 1062 aa13.77□□□□□ -0.2
PBX1-203ENST00000420696 FGFR1OPO95684 399 aaKnown RBP13.77□□□□□ -0.21
PBX1-203ENST00000420696 ATF3P18847 181 aa13.77□□□□□ -0.21
PBX1-203ENST00000420696 CCDC88BA6NC98 1476 aa13.77□□□□□ -0.21
PBX1-203ENST00000420696 SLU7O95391 586 aaKnown RBP13.77□□□□□ -0.21
PBX1-203ENST00000420696 LARP1Q6PKG0 1096 aaKnown RBP13.77□□□□□ -0.21
PBX1-203ENST00000420696 TNMDQ9H2S6 317 aa13.77□□□□□ -0.21
PBX1-203ENST00000420696 WDR33Q9C0J8 1336 aaKnown RBP13.77□□□□□ -0.21
PBX1-203ENST00000420696 CYP46A1Q9Y6A2 500 aa13.76□□□□□ -0.21
PBX1-203ENST00000420696 CCDC83Q8IWF9 413 aa13.76□□□□□ -0.21
PBX1-203ENST00000420696 RAB3IL1Q8TBN0 382 aa13.76□□□□□ -0.21
PBX1-203ENST00000420696 CEP131Q9UPN4 1083 aa13.76□□□□□ -0.21
PBX1-203ENST00000420696 SURF6O75683 361 aaKnown RBP13.76□□□□□ -0.21
PBX1-203ENST00000420696 FSD2A1L4K1 749 aa13.76□□□□□ -0.21
PBX1-203ENST00000420696 PAFAH1B1P43034 410 aa13.76□□□□□ -0.21
PBX1-203ENST00000420696 NEK4P51957 841 aa13.76□□□□□ -0.21
PBX1-203ENST00000420696 IFFO1Q0D2I5 559 aa13.76□□□□□ -0.21
PBX1-203ENST00000420696 CCDC30Q5VVM6 783 aa13.76□□□□□ -0.21
PBX1-203ENST00000420696 CETN1Q12798 172 aa13.75□□□□□ -0.21
PBX1-203ENST00000420696 CRBNQ96SW2 442 aa13.75□□□□□ -0.21
PBX1-203ENST00000420696 LNPKQ9C0E8 428 aa13.75□□□□□ -0.21
PBX1-203ENST00000420696 PANK3Q9H999 370 aa13.75□□□□□ -0.21
PBX1-203ENST00000420696 FANCIQ9NVI1 1328 aa13.75□□□□□ -0.21
PBX1-203ENST00000420696 LUZP1Q86V48 1076 aa13.75□□□□□ -0.21
PBX1-203ENST00000420696 RUNDC1Q96C34 613 aa13.75□□□□□ -0.21
PBX1-203ENST00000420696 FAM193AP78312 1265 aa13.75□□□□□ -0.21
PBX1-203ENST00000420696 CNNM1Q9NRU3 951 aa13.75□□□□□ -0.21
PBX1-203ENST00000420696 ZSCAN12O43309 604 aa13.75□□□□□ -0.21
PBX1-203ENST00000420696 ZWINTO95229 277 aa13.75□□□□□ -0.21
PBX1-203ENST00000420696 SCLT1Q96NL6 688 aa13.75□□□□□ -0.21
PBX1-203ENST00000420696 FIBPO43427 364 aa13.75□□□□□ -0.21
PBX1-203ENST00000420696 FKBP15Q5T1M5 1219 aa13.75□□□□□ -0.21
PBX1-203ENST00000420696 NAA15Q9BXJ9 866 aaKnown RBP13.75□□□□□ -0.21
PBX1-203ENST00000420696 ACTN2P35609 894 aa13.74□□□□□ -0.21
PBX1-203ENST00000420696 APAF1O14727 1248 aa13.74□□□□□ -0.21
PBX1-203ENST00000420696 RAB34Q9BZG1 259 aa13.74□□□□□ -0.21
PBX1-203ENST00000420696 TTC39AQ5SRH9 613 aa13.74□□□□□ -0.21
PBX1-203ENST00000420696 GAS2L2Q8NHY3 880 aa13.74□□□□□ -0.21
PBX1-203ENST00000420696 CARMIL1Q5VZK9 1371 aa13.74□□□□□ -0.21
PBX1-203ENST00000420696 TRAK2O60296 914 aa13.74□□□□□ -0.21
PBX1-203ENST00000420696 AIMP1Q12904 312 aaKnown RBP13.74□□□□□ -0.21
PBX1-203ENST00000420696 DAAM2Q86T65 1068 aa13.74□□□□□ -0.21
PBX1-203ENST00000420696 NECTIN2Q92692 538 aa13.74□□□□□ -0.21
PBX1-203ENST00000420696 ZSCAN31Q96LW9 406 aaPredicted RBP13.74□□□□□ -0.21
PBX1-203ENST00000420696 UBAC1Q9BSL1 405 aa13.74□□□□□ -0.21
PBX1-203ENST00000420696 KRT32Q14532 448 aa13.73□□□□□ -0.21
PBX1-203ENST00000420696 CCDC113Q9H0I3 377 aa13.73□□□□□ -0.21
PBX1-203ENST00000420696 PIBF1Q8WXW3 757 aa13.73□□□□□ -0.21
PBX1-203ENST00000420696 TSG101Q99816 390 aa13.73□□□□□ -0.21
PBX1-203ENST00000420696 CTNNA2P26232 953 aa13.73□□□□□ -0.21
PBX1-203ENST00000420696 BBXQ8WY36 941 aaPredicted RBP13.73□□□□□ -0.21
PBX1-203ENST00000420696 DNAJC2Q99543 621 aaKnown RBP13.73□□□□□ -0.21
PBX1-203ENST00000420696 SPECC1Q5M775 1068 aa13.73□□□□□ -0.21
PBX1-203ENST00000420696 EXOC6Q8TAG9 804 aa13.73□□□□□ -0.21
PBX1-203ENST00000420696 UPF3BQ9BZI7 483 aaKnown RBP13.73□□□□□ -0.21
PBX1-203ENST00000420696 SPDYE4A6NLX3 237 aa13.72□□□□□ -0.21
PBX1-203ENST00000420696 L3MBTL2Q969R5 705 aa13.72□□□□□ -0.21
PBX1-203ENST00000420696 ZBED9Q6R2W3 1325 aa13.72□□□□□ -0.21
PBX1-203ENST00000420696 USO1O60763 962 aaKnown RBP13.72□□□□□ -0.21
PBX1-203ENST00000420696 PLEKHO1Q53GL0 409 aaPredicted RBP13.72□□□□□ -0.21
PBX1-203ENST00000420696 DRC1Q96MC2 740 aa13.72□□□□□ -0.21
PBX1-203ENST00000420696 FBF1Q8TES7 1133 aa13.71□□□□□ -0.21
PBX1-203ENST00000420696 PPP6R1Q9UPN7 881 aa13.71□□□□□ -0.21
PBX1-203ENST00000420696 PHAXQ9H814 394 aaKnown RBP13.71□□□□□ -0.21
PBX1-203ENST00000420696 CCDC144AA2RUR9 1427 aa13.71□□□□□ -0.22
PBX1-203ENST00000420696 POTEB2H3BUK9 544 aa13.71□□□□□ -0.22
PBX1-203ENST00000420696 ZSCAN29Q8IWY8 852 aaPredicted RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms