RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 PPIP5K1Q6PFW1 1433 aa14.92□□□□□ -0.02
TNFAIP3-202ENST00000420009 C11orf95C9JLR9 678 aaPredicted RBP14.91□□□□□ -0.02
TNFAIP3-202ENST00000420009 ABCB7O75027 752 aa14.91□□□□□ -0.02
TNFAIP3-202ENST00000420009 NLRP13Q86W25 1043 aa14.91□□□□□ -0.02
TNFAIP3-202ENST00000420009 SPON1Q9HCB6 807 aa14.91□□□□□ -0.02
TNFAIP3-202ENST00000420009 AATKQ6ZMQ8 1374 aa14.9□□□□□ -0.02
TNFAIP3-202ENST00000420009 KCNQ2O43526 872 aa14.9□□□□□ -0.02
TNFAIP3-202ENST00000420009 CASZ1Q86V15 1759 aa14.9□□□□□ -0.02
TNFAIP3-202ENST00000420009 USP6P35125 1406 aa14.89□□□□□ -0.03
TNFAIP3-202ENST00000420009 SBF2Q86WG5 1849 aa14.88□□□□□ -0.03
TNFAIP3-202ENST00000420009 PPP1R1BQ9UD71 204 aaPredicted RBP14.88□□□□□ -0.03
TNFAIP3-202ENST00000420009 WNK3Q9BYP7 1800 aa14.87□□□□□ -0.03
TNFAIP3-202ENST00000420009 BCL9O00512 1426 aa14.87□□□□□ -0.03
TNFAIP3-202ENST00000420009 PLSCR1O15162 318 aa14.87□□□□□ -0.03
TNFAIP3-202ENST00000420009 NBPF1Q3BBV0 1214 aa14.87□□□□□ -0.03
TNFAIP3-202ENST00000420009 ANO8Q9HCE9 1232 aaPredicted RBP14.87□□□□□ -0.03
TNFAIP3-202ENST00000420009 COL18A1P39060 1754 aa14.87□□□□□ -0.03
TNFAIP3-202ENST00000420009 PIK3C2AO00443 1686 aa14.87□□□□□ -0.03
TNFAIP3-202ENST00000420009 UTRNP46939 3433 aa14.86□□□□□ -0.03
TNFAIP3-202ENST00000420009 SRPK2P78362 688 aaKnown RBP14.86□□□□□ -0.03
TNFAIP3-202ENST00000420009 QRICH2Q9H0J4 1663 aa14.86□□□□□ -0.03
TNFAIP3-202ENST00000420009 CENPJQ9HC77 1338 aaPredicted RBP14.86□□□□□ -0.03
TNFAIP3-202ENST00000420009 CABP2Q9NPB3 220 aa14.85□□□□□ -0.03
TNFAIP3-202ENST00000420009 DDB1Q16531 1140 aa14.84□□□□□ -0.03
TNFAIP3-202ENST00000420009 PTF1AQ7RTS3 328 aa14.84□□□□□ -0.03
TNFAIP3-202ENST00000420009 BCL11BQ9C0K0 894 aaPredicted RBP14.84□□□□□ -0.03
TNFAIP3-202ENST00000420009 WDR17Q8IZU2 1322 aa14.84□□□□□ -0.03
TNFAIP3-202ENST00000420009 CPSF1Q10570 1443 aaKnown RBP14.83□□□□□ -0.03
TNFAIP3-202ENST00000420009 NLRP6P59044 892 aa14.83□□□□□ -0.04
TNFAIP3-202ENST00000420009 MYOM1P52179 1685 aa14.82□□□□□ -0.04
TNFAIP3-202ENST00000420009 TOM1L2Q6ZVM7 507 aa14.82□□□□□ -0.04
TNFAIP3-202ENST00000420009 PDGFDQ9GZP0 370 aaPredicted RBP14.82□□□□□ -0.04
TNFAIP3-202ENST00000420009 AKAP12Q02952 1782 aa14.81□□□□□ -0.04
TNFAIP3-202ENST00000420009 ZBTB7CA1YPR0 619 aa14.81□□□□□ -0.04
TNFAIP3-202ENST00000420009 PROM2Q8N271 834 aa14.81□□□□□ -0.04
TNFAIP3-202ENST00000420009 MARCH10Q8NA82 808 aaPredicted RBP14.81□□□□□ -0.04
TNFAIP3-202ENST00000420009 CABP1Q9NZU7 370 aa14.81□□□□□ -0.04
TNFAIP3-202ENST00000420009 AXIN2Q9Y2T1 843 aa14.81□□□□□ -0.04
TNFAIP3-202ENST00000420009 CDCA7Q9BWT1 371 aaPredicted RBP14.8□□□□□ -0.04
TNFAIP3-202ENST00000420009 NFAT5O94916 1531 aa14.79□□□□□ -0.04
TNFAIP3-202ENST00000420009 ABCC6O95255 1503 aa14.79□□□□□ -0.04
TNFAIP3-202ENST00000420009 PTGER2P43116 358 aa14.79□□□□□ -0.04
TNFAIP3-202ENST00000420009 ARHGEF25Q86VW2 580 aa14.79□□□□□ -0.04
TNFAIP3-202ENST00000420009 TRPM1Q7Z4N2 1603 aa14.78□□□□□ -0.04
TNFAIP3-202ENST00000420009 TNS2Q63HR2 1409 aa14.78□□□□□ -0.04
TNFAIP3-202ENST00000420009 CARD10Q9BWT7 1032 aa14.78□□□□□ -0.04
TNFAIP3-202ENST00000420009 ZBTB7AO95365 584 aa14.77□□□□□ -0.05
TNFAIP3-202ENST00000420009 TTC21BQ7Z4L5 1316 aa14.76□□□□□ -0.05
TNFAIP3-202ENST00000420009 TXNRD1Q16881 649 aa14.76□□□□□ -0.05
TNFAIP3-202ENST00000420009 KCNH5Q8NCM2 988 aa14.76□□□□□ -0.05
TNFAIP3-202ENST00000420009 RGPD5Q99666 1765 aa14.75□□□□□ -0.05
TNFAIP3-202ENST00000420009 NHSQ6T4R5 1651 aa14.75□□□□□ -0.05
TNFAIP3-202ENST00000420009 EVC2Q86UK5 1308 aa14.75□□□□□ -0.05
TNFAIP3-202ENST00000420009 PAPPAQ13219 1627 aa14.75□□□□□ -0.05
TNFAIP3-202ENST00000420009 CCDC7Q96M83 1385 aa14.74□□□□□ -0.05
TNFAIP3-202ENST00000420009 TTC21AQ8NDW8 1320 aa14.74□□□□□ -0.05
TNFAIP3-202ENST00000420009 SLC15A2Q16348 729 aa14.74□□□□□ -0.05
TNFAIP3-202ENST00000420009 SAMD1Q6SPF0 538 aaPredicted RBP14.74□□□□□ -0.05
TNFAIP3-202ENST00000420009 SGIP1Q9BQI5 828 aa14.74□□□□□ -0.05
TNFAIP3-202ENST00000420009 STK32BQ9NY57 414 aa14.74□□□□□ -0.05
TNFAIP3-202ENST00000420009 ZNF692Q9BU19 519 aaPredicted RBP14.73□□□□□ -0.05
TNFAIP3-202ENST00000420009 ATF5Q9Y2D1 282 aaPredicted RBP14.73□□□□□ -0.05
TNFAIP3-202ENST00000420009 USP54Q70EL1 1684 aa14.72□□□□□ -0.05
TNFAIP3-202ENST00000420009 CSB-PGBD3P0DP91 1061 aa14.72□□□□□ -0.05
TNFAIP3-202ENST00000420009 ZNF784Q8NCA9 323 aaPredicted RBP14.72□□□□□ -0.05
TNFAIP3-202ENST00000420009 FHDC1Q9C0D6 1143 aaPredicted RBP14.72□□□□□ -0.05
TNFAIP3-202ENST00000420009 MTFR1LQ9H019 292 aa14.72□□□□□ -0.05
TNFAIP3-202ENST00000420009 EXOC5O00471 708 aa14.71□□□□□ -0.05
TNFAIP3-202ENST00000420009 SOX12O15370 315 aa14.71□□□□□ -0.05
TNFAIP3-202ENST00000420009 SYT17Q9BSW7 474 aa14.71□□□□□ -0.05
TNFAIP3-202ENST00000420009 MON2Q7Z3U7 1717 aa14.71□□□□□ -0.05
TNFAIP3-202ENST00000420009 MAP3K5Q99683 1374 aa14.71□□□□□ -0.06
TNFAIP3-202ENST00000420009 ERBB3P21860 1342 aa14.69□□□□□ -0.06
TNFAIP3-202ENST00000420009 L3MBTL2Q969R5 705 aa14.69□□□□□ -0.06
TNFAIP3-202ENST00000420009 USP31Q70CQ4 1352 aa14.69□□□□□ -0.06
TNFAIP3-202ENST00000420009 KTN1Q86UP2 1357 aaKnown RBP14.69□□□□□ -0.06
TNFAIP3-202ENST00000420009 BTAF1O14981 1849 aa14.67□□□□□ -0.06
TNFAIP3-202ENST00000420009 RBM42Q9BTD8 480 aaKnown RBP14.67□□□□□ -0.06
TNFAIP3-202ENST00000420009 CD163L1Q9NR16 1453 aa14.66□□□□□ -0.06
TNFAIP3-202ENST00000420009 ROCK2O75116 1388 aaKnown RBP14.66□□□□□ -0.06
TNFAIP3-202ENST00000420009 SBNO2Q9Y2G9 1366 aa14.66□□□□□ -0.06
TNFAIP3-202ENST00000420009 ARXQ96QS3 562 aa14.66□□□□□ -0.06
TNFAIP3-202ENST00000420009 GOLGB1Q14789 3259 aaKnown RBP14.66□□□□□ -0.06
TNFAIP3-202ENST00000420009 ACSBG1Q96GR2 724 aa14.65□□□□□ -0.06
TNFAIP3-202ENST00000420009 CHD4Q14839 1912 aa14.64□□□□□ -0.07
TNFAIP3-202ENST00000420009 IL2RBP14784 551 aa14.64□□□□□ -0.07
TNFAIP3-202ENST00000420009 ZNF827Q17R98 1081 aa14.64□□□□□ -0.07
TNFAIP3-202ENST00000420009 LTN1O94822 1766 aa14.64□□□□□ -0.07
TNFAIP3-202ENST00000420009 LRRC4BQ9NT99 713 aa14.63□□□□□ -0.07
TNFAIP3-202ENST00000420009 NLRP2Q9NX02 1062 aa14.63□□□□□ -0.07
TNFAIP3-202ENST00000420009 COL24A1Q17RW2 1714 aa14.63□□□□□ -0.07
TNFAIP3-202ENST00000420009 QSER1Q2KHR3 1735 aa14.63□□□□□ -0.07
TNFAIP3-202ENST00000420009 NME9Q86XW9 330 aa14.62□□□□□ -0.07
TNFAIP3-202ENST00000420009 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.61□□□□□ -0.07
TNFAIP3-202ENST00000420009 ANKRD24Q8TF21 1146 aa14.61□□□□□ -0.07
TNFAIP3-202ENST00000420009 AKT1S1Q96B36 256 aa14.61□□□□□ -0.07
TNFAIP3-202ENST00000420009 EDC4Q6P2E9 1401 aaKnown RBP14.6□□□□□ -0.07
TNFAIP3-202ENST00000420009 C1QTNF8P60827 252 aa14.6□□□□□ -0.07
TNFAIP3-202ENST00000420009 FAM208AQ9UK61 1670 aaKnown RBP14.59□□□□□ -0.07
TNFAIP3-202ENST00000420009 SLC27A3Q5K4L6 730 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms