RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 NFAT5O94916 1531 aa24.63■■□□□ 1.53
PTCD1-202ENST00000419981 KTN1Q86UP2 1357 aaKnown RBP24.63■■□□□ 1.53
PTCD1-202ENST00000419981 APBA3O96018 575 aa24.62■■□□□ 1.53
PTCD1-202ENST00000419981 TONSLQ96HA7 1378 aa24.62■■□□□ 1.53
PTCD1-202ENST00000419981 KCNH5Q8NCM2 988 aa24.61■■□□□ 1.53
PTCD1-202ENST00000419981 CAMKK2Q96RR4 588 aa24.61■■□□□ 1.53
PTCD1-202ENST00000419981 CARD11Q9BXL7 1154 aa24.61■■□□□ 1.53
PTCD1-202ENST00000419981 ABCC6O95255 1503 aa24.61■■□□□ 1.53
PTCD1-202ENST00000419981 TOM1L2Q6ZVM7 507 aa24.6■■□□□ 1.53
PTCD1-202ENST00000419981 R3HDM1Q15032 1099 aaKnown RBP24.59■■□□□ 1.53
PTCD1-202ENST00000419981 OVOS2A0A0G2JMS6 1433 aa24.59■■□□□ 1.53
PTCD1-202ENST00000419981 OVOS2A0A0J9YW53 1432 aa24.59■■□□□ 1.53
PTCD1-202ENST00000419981 OVOS2Q6IE36 1432 aa24.59■■□□□ 1.53
PTCD1-202ENST00000419981 WDR17Q8IZU2 1322 aa24.59■■□□□ 1.53
PTCD1-202ENST00000419981 C11orf95C9JLR9 678 aaPredicted RBP24.57■■□□□ 1.52
PTCD1-202ENST00000419981 SOX12O15370 315 aa24.57■■□□□ 1.52
PTCD1-202ENST00000419981 ARHGEF25Q86VW2 580 aa24.57■■□□□ 1.52
PTCD1-202ENST00000419981 AXIN2Q9Y2T1 843 aa24.57■■□□□ 1.52
PTCD1-202ENST00000419981 CD163L1Q9NR16 1453 aa24.57■■□□□ 1.52
PTCD1-202ENST00000419981 DDB1Q16531 1140 aa24.54■■□□□ 1.52
PTCD1-202ENST00000419981 USP31Q70CQ4 1352 aa24.52■■□□□ 1.52
PTCD1-202ENST00000419981 KAT6BQ8WYB5 2073 aa24.51■■□□□ 1.51
PTCD1-202ENST00000419981 CSB-PGBD3P0DP91 1061 aa24.51■■□□□ 1.51
PTCD1-202ENST00000419981 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.51■■□□□ 1.51
PTCD1-202ENST00000419981 TMC1Q8TDI8 760 aa24.5■■□□□ 1.51
PTCD1-202ENST00000419981 CDCA7Q9BWT1 371 aaPredicted RBP24.5■■□□□ 1.51
PTCD1-202ENST00000419981 HDGFL2Q7Z4V5 671 aaPredicted RBP24.49■■□□□ 1.51
PTCD1-202ENST00000419981 CARD10Q9BWT7 1032 aa24.49■■□□□ 1.51
PTCD1-202ENST00000419981 EDC4Q6P2E9 1401 aaKnown RBP24.49■■□□□ 1.51
PTCD1-202ENST00000419981 FAM208AQ9UK61 1670 aaKnown RBP24.49■■□□□ 1.51
PTCD1-202ENST00000419981 CCDC7Q96M83 1385 aa24.47■■□□□ 1.51
PTCD1-202ENST00000419981 NBPF14Q5TI25 921 aa24.47■■□□□ 1.51
PTCD1-202ENST00000419981 NME9Q86XW9 330 aa24.47■■□□□ 1.51
PTCD1-202ENST00000419981 SLC12A5Q9H2X9 1139 aa24.46■■□□□ 1.51
PTCD1-202ENST00000419981 NHSQ6T4R5 1651 aa24.46■■□□□ 1.51
PTCD1-202ENST00000419981 A0A1W2PP64 1363 aa24.45■■□□□ 1.5
PTCD1-202ENST00000419981 BCL9O00512 1426 aa24.44■■□□□ 1.5
PTCD1-202ENST00000419981 PUS7Q96PZ0 661 aaKnown RBP24.44■■□□□ 1.5
PTCD1-202ENST00000419981 TERF2IPQ9NYB0 399 aa24.44■■□□□ 1.5
PTCD1-202ENST00000419981 TNS2Q63HR2 1409 aa24.44■■□□□ 1.5
PTCD1-202ENST00000419981 MARCH10Q8NA82 808 aaPredicted RBP24.43■■□□□ 1.5
PTCD1-202ENST00000419981 RGPD2P0DJD1 1756 aa24.42■■□□□ 1.5
PTCD1-202ENST00000419981 CASZ1Q86V15 1759 aa24.42■■□□□ 1.5
PTCD1-202ENST00000419981 ERBB3P21860 1342 aa24.41■■□□□ 1.5
PTCD1-202ENST00000419981 PLSCR1O15162 318 aa24.41■■□□□ 1.5
PTCD1-202ENST00000419981 BCL11BQ9C0K0 894 aaPredicted RBP24.41■■□□□ 1.5
PTCD1-202ENST00000419981 NINLQ9Y2I6 1382 aa24.41■■□□□ 1.5
PTCD1-202ENST00000419981 BTAF1O14981 1849 aa24.4■■□□□ 1.5
PTCD1-202ENST00000419981 EXOC5O00471 708 aa24.39■■□□□ 1.49
PTCD1-202ENST00000419981 KIF20BQ96Q89 1820 aa24.39■■□□□ 1.49
PTCD1-202ENST00000419981 ST20-MTHFSA0A0A6YYL1 179 aa24.38■■□□□ 1.49
PTCD1-202ENST00000419981 TRIM26Q12899 539 aaPredicted RBP24.38■■□□□ 1.49
PTCD1-202ENST00000419981 TESK2Q96S53 571 aa24.38■■□□□ 1.49
PTCD1-202ENST00000419981 PTF1AQ7RTS3 328 aa24.37■■□□□ 1.49
PTCD1-202ENST00000419981 SLC24A1O60721 1099 aa24.36■■□□□ 1.49
PTCD1-202ENST00000419981 NLRP2Q9NX02 1062 aa24.36■■□□□ 1.49
PTCD1-202ENST00000419981 ANKRD24Q8TF21 1146 aa24.34■■□□□ 1.49
PTCD1-202ENST00000419981 IL2RBP14784 551 aa24.32■■□□□ 1.48
PTCD1-202ENST00000419981 SHANK3Q9BYB0 1731 aa24.31■■□□□ 1.48
PTCD1-202ENST00000419981 SPON1Q9HCB6 807 aa24.3■■□□□ 1.48
PTCD1-202ENST00000419981 ANO8Q9HCE9 1232 aaPredicted RBP24.3■■□□□ 1.48
PTCD1-202ENST00000419981 ANKRD36BQ8N2N9 1353 aa24.29■■□□□ 1.48
PTCD1-202ENST00000419981 MYOM1P52179 1685 aa24.29■■□□□ 1.48
PTCD1-202ENST00000419981 USP47Q96K76 1375 aa24.29■■□□□ 1.48
PTCD1-202ENST00000419981 DOT1LQ8TEK3 1739 aa24.28■■□□□ 1.48
PTCD1-202ENST00000419981 KCNQ2O43526 872 aa24.28■■□□□ 1.48
PTCD1-202ENST00000419981 PROM2Q8N271 834 aa24.28■■□□□ 1.48
PTCD1-202ENST00000419981 IP6K1Q92551 441 aa24.28■■□□□ 1.48
PTCD1-202ENST00000419981 COG3Q96JB2 828 aa24.28■■□□□ 1.48
PTCD1-202ENST00000419981 PAPPAQ13219 1627 aa24.26■■□□□ 1.47
PTCD1-202ENST00000419981 TXNRD1Q16881 649 aa24.26■■□□□ 1.47
PTCD1-202ENST00000419981 PPP1R1BQ9UD71 204 aaPredicted RBP24.26■■□□□ 1.47
PTCD1-202ENST00000419981 TMF1P82094 1093 aa24.25■■□□□ 1.47
PTCD1-202ENST00000419981 ACSBG1Q96GR2 724 aa24.25■■□□□ 1.47
PTCD1-202ENST00000419981 QSER1Q2KHR3 1735 aa24.24■■□□□ 1.47
PTCD1-202ENST00000419981 LTV1Q96GA3 475 aaPredicted RBP24.23■■□□□ 1.47
PTCD1-202ENST00000419981 MAP3K19Q56UN5 1328 aa24.23■■□□□ 1.47
PTCD1-202ENST00000419981 STK32BQ9NY57 414 aa24.22■■□□□ 1.47
PTCD1-202ENST00000419981 HOXC9P31274 260 aa24.21■■□□□ 1.47
PTCD1-202ENST00000419981 AMPHP49418 695 aa24.21■■□□□ 1.47
PTCD1-202ENST00000419981 LY75O60449 1722 aa24.21■■□□□ 1.47
PTCD1-202ENST00000419981 RTL1A6NKG5 1358 aa24.2■■□□□ 1.46
PTCD1-202ENST00000419981 TUBGCP6Q96RT7 1819 aa24.2■■□□□ 1.46
PTCD1-202ENST00000419981 FBLN1P23142 703 aa24.18■■□□□ 1.46
PTCD1-202ENST00000419981 SLC15A2Q16348 729 aa24.18■■□□□ 1.46
PTCD1-202ENST00000419981 MAP2P11137 1827 aaKnown RBP24.18■■□□□ 1.46
PTCD1-202ENST00000419981 CDCA8Q53HL2 280 aa24.17■■□□□ 1.46
PTCD1-202ENST00000419981 PDGFDQ9GZP0 370 aaPredicted RBP24.17■■□□□ 1.46
PTCD1-202ENST00000419981 GGNBP2Q9H3C7 697 aa24.16■■□□□ 1.46
PTCD1-202ENST00000419981 FYB1O15117 783 aa24.15■■□□□ 1.46
PTCD1-202ENST00000419981 ZBTB7AO95365 584 aa24.15■■□□□ 1.46
PTCD1-202ENST00000419981 DDX54Q8TDD1 881 aaKnown RBP24.15■■□□□ 1.46
PTCD1-202ENST00000419981 ANKRD26Q9UPS8 1709 aa24.15■■□□□ 1.46
PTCD1-202ENST00000419981 MEGF6O75095 1541 aa24.15■■□□□ 1.46
PTCD1-202ENST00000419981 RRS1Q15050 365 aaKnown RBP24.14■■□□□ 1.45
PTCD1-202ENST00000419981 SMG6Q86US8 1419 aaKnown RBP24.14■■□□□ 1.45
PTCD1-202ENST00000419981 ITGB4P16144 1822 aa24.11■■□□□ 1.45
PTCD1-202ENST00000419981 TIMELESSQ9UNS1 1208 aa24.1■■□□□ 1.45
PTCD1-202ENST00000419981 ATF5Q9Y2D1 282 aaPredicted RBP24.1■■□□□ 1.45
PTCD1-202ENST00000419981 CHD4Q14839 1912 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms