RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 ZBTB7CA1YPR0 619 aa24.3■■□□□ 1.48
EPCAM-203ENST00000419334 COL5A2P05997 1499 aaPredicted RBP24.3■■□□□ 1.48
EPCAM-203ENST00000419334 STRN4Q9NRL3 753 aa24.26■■□□□ 1.47
EPCAM-203ENST00000419334 NSD2O96028 1365 aa24.26■■□□□ 1.47
EPCAM-203ENST00000419334 RGS12O14924 1447 aa24.26■■□□□ 1.47
EPCAM-203ENST00000419334 EVA1CP58658 441 aa24.25■■□□□ 1.47
EPCAM-203ENST00000419334 AXIN2Q9Y2T1 843 aa24.25■■□□□ 1.47
EPCAM-203ENST00000419334 CCDC9Q9Y3X0 531 aaKnown RBP24.25■■□□□ 1.47
EPCAM-203ENST00000419334 SPATA31A5Q5VU36 1347 aa24.25■■□□□ 1.47
EPCAM-203ENST00000419334 SPATA31A7Q8IWB4 1347 aa24.25■■□□□ 1.47
EPCAM-203ENST00000419334 KNSTRNQ9Y448 316 aa24.24■■□□□ 1.47
EPCAM-203ENST00000419334 BLMP54132 1417 aaPredicted RBP24.21■■□□□ 1.47
EPCAM-203ENST00000419334 MAP3K19Q56UN5 1328 aa24.21■■□□□ 1.47
EPCAM-203ENST00000419334 SPATA31A1Q5TZJ5 1347 aa24.21■■□□□ 1.47
EPCAM-203ENST00000419334 PER1O15534 1290 aaPredicted RBP24.21■■□□□ 1.47
EPCAM-203ENST00000419334 LARP1Q6PKG0 1096 aaKnown RBP24.21■■□□□ 1.47
EPCAM-203ENST00000419334 CRB1P82279 1406 aa24.2■■□□□ 1.46
EPCAM-203ENST00000419334 FBLN1P23142 703 aa24.2■■□□□ 1.46
EPCAM-203ENST00000419334 RTL1A6NKG5 1358 aa24.19■■□□□ 1.46
EPCAM-203ENST00000419334 WDR17Q8IZU2 1322 aa24.19■■□□□ 1.46
EPCAM-203ENST00000419334 ONECUT3O60422 494 aaPredicted RBP24.19■■□□□ 1.46
EPCAM-203ENST00000419334 IP6K1Q92551 441 aa24.19■■□□□ 1.46
EPCAM-203ENST00000419334 MAP2P11137 1827 aaKnown RBP24.19■■□□□ 1.46
EPCAM-203ENST00000419334 AMER1Q5JTC6 1135 aaPredicted RBP24.18■■□□□ 1.46
EPCAM-203ENST00000419334 THSD7AQ9UPZ6 1657 aa24.18■■□□□ 1.46
EPCAM-203ENST00000419334 KIF24Q5T7B8 1368 aa24.17■■□□□ 1.46
EPCAM-203ENST00000419334 RRS1Q15050 365 aaKnown RBP24.17■■□□□ 1.46
EPCAM-203ENST00000419334 PEAK1Q9H792 1746 aa24.17■■□□□ 1.46
EPCAM-203ENST00000419334 ERBB3P21860 1342 aa24.16■■□□□ 1.46
EPCAM-203ENST00000419334 FAM208AQ9UK61 1670 aaKnown RBP24.16■■□□□ 1.46
EPCAM-203ENST00000419334 HOXC9P31274 260 aa24.16■■□□□ 1.46
EPCAM-203ENST00000419334 BRWD3Q6RI45 1802 aa24.16■■□□□ 1.46
EPCAM-203ENST00000419334 AMPHP49418 695 aa24.15■■□□□ 1.46
EPCAM-203ENST00000419334 FAM98CQ17RN3 349 aaKnown RBP24.15■■□□□ 1.46
EPCAM-203ENST00000419334 TOM1L2Q6ZVM7 507 aa24.14■■□□□ 1.45
EPCAM-203ENST00000419334 THRAP3Q9Y2W1 955 aaKnown RBP24.14■■□□□ 1.45
EPCAM-203ENST00000419334 WNK3Q9BYP7 1800 aa24.14■■□□□ 1.45
EPCAM-203ENST00000419334 NPC1L1Q9UHC9 1359 aa24.14■■□□□ 1.45
EPCAM-203ENST00000419334 CSB-PGBD3P0DP91 1061 aa24.13■■□□□ 1.45
EPCAM-203ENST00000419334 BARGINQ6ZT62 677 aa24.13■■□□□ 1.45
EPCAM-203ENST00000419334 TCP11L2Q8N4U5 519 aa24.13■■□□□ 1.45
EPCAM-203ENST00000419334 USP35Q9P2H5 1018 aa24.13■■□□□ 1.45
EPCAM-203ENST00000419334 FLT4P35916 1363 aa24.13■■□□□ 1.45
EPCAM-203ENST00000419334 SEPT12Q8IYM1 358 aa24.12■■□□□ 1.45
EPCAM-203ENST00000419334 ANKRD24Q8TF21 1146 aa24.12■■□□□ 1.45
EPCAM-203ENST00000419334 MORC1Q86VD1 984 aa24.11■■□□□ 1.45
EPCAM-203ENST00000419334 CARD10Q9BWT7 1032 aa24.11■■□□□ 1.45
EPCAM-203ENST00000419334 EMILIN1Q9Y6C2 1016 aa24.1■■□□□ 1.45
EPCAM-203ENST00000419334 PARP4Q9UKK3 1724 aaKnown RBP24.1■■□□□ 1.45
EPCAM-203ENST00000419334 INSRP06213 1382 aa24.09■■□□□ 1.45
EPCAM-203ENST00000419334 TNNT2P45379 298 aaPredicted RBP24.09■■□□□ 1.45
EPCAM-203ENST00000419334 POLKQ9UBT6 870 aa24.09■■□□□ 1.45
EPCAM-203ENST00000419334 SMG6Q86US8 1419 aaKnown RBP24.08■■□□□ 1.44
EPCAM-203ENST00000419334 RGPD2P0DJD1 1756 aa24.07■■□□□ 1.44
EPCAM-203ENST00000419334 A0A0G2JS52 829 aa24.07■■□□□ 1.44
EPCAM-203ENST00000419334 MYT1Q01538 1121 aa24.07■■□□□ 1.44
EPCAM-203ENST00000419334 HSP90AB2PQ58FF8 381 aa24.06■■□□□ 1.44
EPCAM-203ENST00000419334 CC2D1BQ5T0F9 858 aaKnown RBP24.06■■□□□ 1.44
EPCAM-203ENST00000419334 LTV1Q96GA3 475 aaPredicted RBP24.05■■□□□ 1.44
EPCAM-203ENST00000419334 NLRP2Q9NX02 1062 aa24.05■■□□□ 1.44
EPCAM-203ENST00000419334 PPM1GO15355 546 aaPredicted RBP24.04■■□□□ 1.44
EPCAM-203ENST00000419334 LRRC37A3O60309 1634 aa24.03■■□□□ 1.44
EPCAM-203ENST00000419334 DISP2A7MBM2 1401 aa24.03■■□□□ 1.44
EPCAM-203ENST00000419334 KRT27Q7Z3Y8 459 aa24.03■■□□□ 1.44
EPCAM-203ENST00000419334 CDCA7Q9BWT1 371 aaPredicted RBP24.03■■□□□ 1.44
EPCAM-203ENST00000419334 DDX10Q13206 875 aaKnown RBP23.97■■□□□ 1.43
EPCAM-203ENST00000419334 NBPF6Q5VWK0 638 aa23.97■■□□□ 1.43
EPCAM-203ENST00000419334 NBPF4Q96M43 638 aa23.97■■□□□ 1.43
EPCAM-203ENST00000419334 IL2RBP14784 551 aa23.96■■□□□ 1.43
EPCAM-203ENST00000419334 DDB1Q16531 1140 aa23.96■■□□□ 1.43
EPCAM-203ENST00000419334 CNGB1Q14028 1251 aaPredicted RBP23.95■■□□□ 1.42
EPCAM-203ENST00000419334 NCAPD2Q15021 1401 aa23.94■■□□□ 1.42
EPCAM-203ENST00000419334 TNS2Q63HR2 1409 aa23.94■■□□□ 1.42
EPCAM-203ENST00000419334 PDE3BQ13370 1112 aa23.94■■□□□ 1.42
EPCAM-203ENST00000419334 UPF1Q92900 1129 aaKnown RBP eCLIP23.94■■□□□ 1.42
EPCAM-203ENST00000419334 MTHFSP49914 203 aa23.93■■□□□ 1.42
EPCAM-203ENST00000419334 EIF4A2Q14240 407 aaKnown RBP23.93■■□□□ 1.42
EPCAM-203ENST00000419334 EP400Q96L91 3159 aa23.92■■□□□ 1.42
EPCAM-203ENST00000419334 ZNF316A6NFI3 1004 aaPredicted RBP23.92■■□□□ 1.42
EPCAM-203ENST00000419334 USHBP1Q8N6Y0 703 aa23.91■■□□□ 1.42
EPCAM-203ENST00000419334 MEGF6O75095 1541 aa23.9■■□□□ 1.42
EPCAM-203ENST00000419334 EXOC5O00471 708 aa23.9■■□□□ 1.42
EPCAM-203ENST00000419334 FAM182BQ5T319 152 aa23.89■■□□□ 1.41
EPCAM-203ENST00000419334 EYA1Q99502 592 aa23.89■■□□□ 1.41
EPCAM-203ENST00000419334 RGPD1P0DJD0 1748 aa23.89■■□□□ 1.41
EPCAM-203ENST00000419334 OVOS2A0A0G2JMS6 1433 aa23.88■■□□□ 1.41
EPCAM-203ENST00000419334 FAM196AQ6ZSG2 479 aa23.88■■□□□ 1.41
EPCAM-203ENST00000419334 PARD3Q8TEW0 1356 aa23.88■■□□□ 1.41
EPCAM-203ENST00000419334 SHANK3Q9BYB0 1731 aa23.87■■□□□ 1.41
EPCAM-203ENST00000419334 IGSF1Q8N6C5 1336 aa23.86■■□□□ 1.41
EPCAM-203ENST00000419334 CCDC125Q86Z20 511 aa23.86■■□□□ 1.41
EPCAM-203ENST00000419334 RAPGEF4Q8WZA2 1011 aa23.86■■□□□ 1.41
EPCAM-203ENST00000419334 SBF2Q86WG5 1849 aa23.85■■□□□ 1.41
EPCAM-203ENST00000419334 PPP2R1AP30153 589 aa23.85■■□□□ 1.41
EPCAM-203ENST00000419334 IL13P35225 146 aa23.85■■□□□ 1.41
EPCAM-203ENST00000419334 MARCH10Q8NA82 808 aaPredicted RBP23.85■■□□□ 1.41
EPCAM-203ENST00000419334 COL3A1P02461 1466 aaPredicted RBP23.85■■□□□ 1.41
EPCAM-203ENST00000419334 BCL9O00512 1426 aa23.84■■□□□ 1.41
EPCAM-203ENST00000419334 TATP17735 454 aaPredicted RBP23.84■■□□□ 1.41
EPCAM-203ENST00000419334 PKD1L3Q7Z443 1732 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms