RNA–Protein interactions for RNA: ENST00000419180.6

NPIPB3-201, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 910 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-201ENST00000419180 HIRIP3Q9BW71 556 aaPredicted RBP11.46□□□□□ -0.57
NPIPB3-201ENST00000419180 BCL11BQ9C0K0 894 aaPredicted RBP11.46□□□□□ -0.57
NPIPB3-201ENST00000419180 POGKQ9P215 609 aa11.46□□□□□ -0.57
NPIPB3-201ENST00000419180 THRAP3Q9Y2W1 955 aaKnown RBP11.46□□□□□ -0.57
NPIPB3-201ENST00000419180 CPDO75976 1380 aa11.45□□□□□ -0.58
NPIPB3-201ENST00000419180 PTF1AQ7RTS3 328 aa11.45□□□□□ -0.58
NPIPB3-201ENST00000419180 PROM2Q8N271 834 aa11.45□□□□□ -0.58
NPIPB3-201ENST00000419180 MTFR1LQ9H019 292 aa11.45□□□□□ -0.58
NPIPB3-201ENST00000419180 TOPAZ1Q8N9V7 1692 aa11.44□□□□□ -0.58
NPIPB3-201ENST00000419180 TPRNQ4KMQ1 711 aa11.44□□□□□ -0.58
NPIPB3-201ENST00000419180 GOLGB1Q14789 3259 aaKnown RBP11.44□□□□□ -0.58
NPIPB3-201ENST00000419180 AKAP12Q02952 1782 aa11.44□□□□□ -0.58
NPIPB3-201ENST00000419180 CRB1P82279 1406 aa11.43□□□□□ -0.58
NPIPB3-201ENST00000419180 PAPPAQ13219 1627 aa11.43□□□□□ -0.58
NPIPB3-201ENST00000419180 MINK1Q8N4C8 1332 aaPredicted RBP11.43□□□□□ -0.58
NPIPB3-201ENST00000419180 HOXD11P31277 338 aaPredicted RBP11.43□□□□□ -0.58
NPIPB3-201ENST00000419180 STK32BQ9NY57 414 aa11.43□□□□□ -0.58
NPIPB3-201ENST00000419180 BCL9O00512 1426 aa11.43□□□□□ -0.58
NPIPB3-201ENST00000419180 WASLO00401 505 aaPredicted RBP11.42□□□□□ -0.58
NPIPB3-201ENST00000419180 SLC15A2Q16348 729 aa11.42□□□□□ -0.58
NPIPB3-201ENST00000419180 NUTM2GQ5VZR2 741 aa11.42□□□□□ -0.58
NPIPB3-201ENST00000419180 AATKQ6ZMQ8 1374 aa11.41□□□□□ -0.58
NPIPB3-201ENST00000419180 USP19O94966 1318 aa11.41□□□□□ -0.58
NPIPB3-201ENST00000419180 TXNRD1Q16881 649 aa11.4□□□□□ -0.58
NPIPB3-201ENST00000419180 GTF3C3Q9Y5Q9 886 aa11.4□□□□□ -0.58
NPIPB3-201ENST00000419180 POLR3AO14802 1390 aaPredicted RBP11.4□□□□□ -0.59
NPIPB3-201ENST00000419180 DDB1Q16531 1140 aa11.39□□□□□ -0.59
NPIPB3-201ENST00000419180 GPR162Q16538 588 aa11.39□□□□□ -0.59
NPIPB3-201ENST00000419180 ARHGEF28Q8N1W1 1705 aaKnown RBP11.39□□□□□ -0.59
NPIPB3-201ENST00000419180 COL24A1Q17RW2 1714 aa11.38□□□□□ -0.59
NPIPB3-201ENST00000419180 TRAK1Q9UPV9 953 aa11.38□□□□□ -0.59
NPIPB3-201ENST00000419180 NHSQ6T4R5 1651 aa11.38□□□□□ -0.59
NPIPB3-201ENST00000419180 MARCH10Q8NA82 808 aaPredicted RBP11.37□□□□□ -0.59
NPIPB3-201ENST00000419180 ATP10DQ9P241 1426 aa11.36□□□□□ -0.59
NPIPB3-201ENST00000419180 NUDT16Q96DE0 195 aaKnown RBP11.36□□□□□ -0.59
NPIPB3-201ENST00000419180 SLIT3O75094 1523 aa11.35□□□□□ -0.59
NPIPB3-201ENST00000419180 QSER1Q2KHR3 1735 aa11.35□□□□□ -0.59
NPIPB3-201ENST00000419180 CACNB1Q02641 598 aaPredicted RBP11.35□□□□□ -0.59
NPIPB3-201ENST00000419180 RNF216Q9NWF9 866 aaPredicted RBP11.35□□□□□ -0.59
NPIPB3-201ENST00000419180 COL18A1P39060 1754 aa11.35□□□□□ -0.59
NPIPB3-201ENST00000419180 ACEP12821 1306 aa11.35□□□□□ -0.59
NPIPB3-201ENST00000419180 GCP02774 474 aa11.34□□□□□ -0.59
NPIPB3-201ENST00000419180 HSPA6P17066 643 aa11.34□□□□□ -0.59
NPIPB3-201ENST00000419180 PPARGC1BQ86YN6 1023 aaKnown RBP11.34□□□□□ -0.59
NPIPB3-201ENST00000419180 ABTB2Q8N961 1025 aa11.34□□□□□ -0.59
NPIPB3-201ENST00000419180 MPHOSPH9Q99550 1183 aa11.33□□□□□ -0.6
NPIPB3-201ENST00000419180 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
NPIPB3-201ENST00000419180 TNS2Q63HR2 1409 aa11.33□□□□□ -0.6
NPIPB3-201ENST00000419180 ZNF827Q17R98 1081 aa11.32□□□□□ -0.6
NPIPB3-201ENST00000419180 TOM1L2Q6ZVM7 507 aa11.32□□□□□ -0.6
NPIPB3-201ENST00000419180 CDCA7Q9BWT1 371 aaPredicted RBP11.32□□□□□ -0.6
NPIPB3-201ENST00000419180 BTAF1O14981 1849 aa11.32□□□□□ -0.6
NPIPB3-201ENST00000419180 WDR17Q8IZU2 1322 aa11.32□□□□□ -0.6
NPIPB3-201ENST00000419180 ADCY9O60503 1353 aa11.31□□□□□ -0.6
NPIPB3-201ENST00000419180 ABCC6O95255 1503 aa11.31□□□□□ -0.6
NPIPB3-201ENST00000419180 TUBGCP6Q96RT7 1819 aa11.31□□□□□ -0.6
NPIPB3-201ENST00000419180 NPM2Q86SE8 214 aaKnown RBP11.31□□□□□ -0.6
NPIPB3-201ENST00000419180 NLRP13Q86W25 1043 aa11.31□□□□□ -0.6
NPIPB3-201ENST00000419180 NLGN2Q8NFZ4 835 aa11.31□□□□□ -0.6
NPIPB3-201ENST00000419180 TRPM1Q7Z4N2 1603 aa11.31□□□□□ -0.6
NPIPB3-201ENST00000419180 PLEKHG3A1L390 1219 aa11.3□□□□□ -0.6
NPIPB3-201ENST00000419180 ZBTB7CA1YPR0 619 aa11.3□□□□□ -0.6
NPIPB3-201ENST00000419180 YBX3P16989 372 aaKnown RBP eCLIP11.3□□□□□ -0.6
NPIPB3-201ENST00000419180 PLCB2Q00722 1185 aa11.3□□□□□ -0.6
NPIPB3-201ENST00000419180 CPSF1Q10570 1443 aaKnown RBP11.29□□□□□ -0.6
NPIPB3-201ENST00000419180 POLD1P28340 1107 aa11.29□□□□□ -0.6
NPIPB3-201ENST00000419180 CDK19Q9BWU1 502 aa11.29□□□□□ -0.6
NPIPB3-201ENST00000419180 CCDC61Q9Y6R9 512 aa11.29□□□□□ -0.6
NPIPB3-201ENST00000419180 PIK3C2AO00443 1686 aa11.29□□□□□ -0.6
NPIPB3-201ENST00000419180 BRD4O60885 1362 aaPredicted RBP11.28□□□□□ -0.6
NPIPB3-201ENST00000419180 GRIN3BO60391 1043 aa11.28□□□□□ -0.6
NPIPB3-201ENST00000419180 SLC16A10Q8TF71 515 aa11.28□□□□□ -0.6
NPIPB3-201ENST00000419180 GPBP1L1Q9HC44 474 aaPredicted RBP11.28□□□□□ -0.6
NPIPB3-201ENST00000419180 RGPD5Q99666 1765 aa11.28□□□□□ -0.6
NPIPB3-201ENST00000419180 AXIN2Q9Y2T1 843 aa11.27□□□□□ -0.61
NPIPB3-201ENST00000419180 PNPLA7Q6ZV29 1317 aa11.27□□□□□ -0.61
NPIPB3-201ENST00000419180 PPIP5K1Q6PFW1 1433 aa11.26□□□□□ -0.61
NPIPB3-201ENST00000419180 AKT1S1Q96B36 256 aa11.26□□□□□ -0.61
NPIPB3-201ENST00000419180 CARD10Q9BWT7 1032 aa11.26□□□□□ -0.61
NPIPB3-201ENST00000419180 LRRC4BQ9NT99 713 aa11.26□□□□□ -0.61
NPIPB3-201ENST00000419180 QRICH2Q9H0J4 1663 aa11.26□□□□□ -0.61
NPIPB3-201ENST00000419180 USP6P35125 1406 aa11.26□□□□□ -0.61
NPIPB3-201ENST00000419180 EXOC5O00471 708 aa11.25□□□□□ -0.61
NPIPB3-201ENST00000419180 ACSBG1Q96GR2 724 aa11.25□□□□□ -0.61
NPIPB3-201ENST00000419180 CCDC7Q96M83 1385 aa11.25□□□□□ -0.61
NPIPB3-201ENST00000419180 ZNF526Q8TF50 670 aaPredicted RBP11.24□□□□□ -0.61
NPIPB3-201ENST00000419180 NLRP6P59044 892 aa11.23□□□□□ -0.61
NPIPB3-201ENST00000419180 NFAT5O94916 1531 aa11.22□□□□□ -0.61
NPIPB3-201ENST00000419180 CSB-PGBD3P0DP91 1061 aa11.22□□□□□ -0.61
NPIPB3-201ENST00000419180 ARHGEF25Q86VW2 580 aa11.21□□□□□ -0.61
NPIPB3-201ENST00000419180 LY75O60449 1722 aa11.21□□□□□ -0.62
NPIPB3-201ENST00000419180 KIF3CO14782 793 aa11.2□□□□□ -0.62
NPIPB3-201ENST00000419180 APLP1P51693 650 aa11.2□□□□□ -0.62
NPIPB3-201ENST00000419180 SLC27A3Q5K4L6 730 aa11.2□□□□□ -0.62
NPIPB3-201ENST00000419180 KDM2AQ9Y2K7 1162 aa11.2□□□□□ -0.62
NPIPB3-201ENST00000419180 WDR90Q96KV7 1748 aa11.2□□□□□ -0.62
NPIPB3-201ENST00000419180 CAPN15O75808 1086 aa11.19□□□□□ -0.62
NPIPB3-201ENST00000419180 DNAJC5GQ8N7S2 189 aa11.19□□□□□ -0.62
NPIPB3-201ENST00000419180 DCAF11Q8TEB1 546 aa11.19□□□□□ -0.62
NPIPB3-201ENST00000419180 RNF39Q9H2S5 420 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms