RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 CABP2Q9NPB3 220 aa18.07■□□□□ 0.48
HLA-DMB-258ENST00000418107 CDCA8Q53HL2 280 aa18.06■□□□□ 0.48
HLA-DMB-258ENST00000418107 PARP4Q9UKK3 1724 aaKnown RBP18.06■□□□□ 0.48
HLA-DMB-258ENST00000418107 CRB1P82279 1406 aa18.05■□□□□ 0.48
HLA-DMB-258ENST00000418107 CENPJQ9HC77 1338 aaPredicted RBP18.05■□□□□ 0.48
HLA-DMB-258ENST00000418107 OVOS2A0A0G2JMS6 1433 aa18.03■□□□□ 0.48
HLA-DMB-258ENST00000418107 OVOS2A0A0J9YW53 1432 aa18.03■□□□□ 0.48
HLA-DMB-258ENST00000418107 OVOS2Q6IE36 1432 aa18.03■□□□□ 0.48
HLA-DMB-258ENST00000418107 NLRP6P59044 892 aa18.03■□□□□ 0.48
HLA-DMB-258ENST00000418107 CABP1Q9NZU7 370 aa18.03■□□□□ 0.48
HLA-DMB-258ENST00000418107 BRD4O60885 1362 aaPredicted RBP18.02■□□□□ 0.48
HLA-DMB-258ENST00000418107 USP6P35125 1406 aa18.02■□□□□ 0.48
HLA-DMB-258ENST00000418107 SPON1Q9HCB6 807 aa18.02■□□□□ 0.47
HLA-DMB-258ENST00000418107 PPP1R1BQ9UD71 204 aaPredicted RBP18.02■□□□□ 0.47
HLA-DMB-258ENST00000418107 AATKQ6ZMQ8 1374 aa18.01■□□□□ 0.47
HLA-DMB-258ENST00000418107 PEAK1Q9H792 1746 aa18.01■□□□□ 0.47
HLA-DMB-258ENST00000418107 SLIT3O75094 1523 aa18.01■□□□□ 0.47
HLA-DMB-258ENST00000418107 LRRC37A3O60309 1634 aa18.01■□□□□ 0.47
HLA-DMB-258ENST00000418107 KCNQ2O43526 872 aa18■□□□□ 0.47
HLA-DMB-258ENST00000418107 YY1P25490 414 aa18■□□□□ 0.47
HLA-DMB-258ENST00000418107 DDB1Q16531 1140 aa18■□□□□ 0.47
HLA-DMB-258ENST00000418107 TOM1L2Q6ZVM7 507 aa18■□□□□ 0.47
HLA-DMB-258ENST00000418107 PTF1AQ7RTS3 328 aa17.98■□□□□ 0.47
HLA-DMB-258ENST00000418107 ANO8Q9HCE9 1232 aaPredicted RBP17.98■□□□□ 0.47
HLA-DMB-258ENST00000418107 PIK3C2AO00443 1686 aa17.97■□□□□ 0.47
HLA-DMB-258ENST00000418107 AXIN2Q9Y2T1 843 aa17.97■□□□□ 0.47
HLA-DMB-258ENST00000418107 PLSCR1O15162 318 aa17.96■□□□□ 0.47
HLA-DMB-258ENST00000418107 SBF2Q86WG5 1849 aa17.96■□□□□ 0.47
HLA-DMB-258ENST00000418107 RGPD3A6NKT7 1758 aaPredicted RBP17.96■□□□□ 0.47
HLA-DMB-258ENST00000418107 COL18A1P39060 1754 aa17.96■□□□□ 0.47
HLA-DMB-258ENST00000418107 RGPD4Q7Z3J3 1758 aa17.96■□□□□ 0.47
HLA-DMB-258ENST00000418107 NINLQ9Y2I6 1382 aa17.95■□□□□ 0.46
HLA-DMB-258ENST00000418107 WDR17Q8IZU2 1322 aa17.95■□□□□ 0.46
HLA-DMB-258ENST00000418107 CNGB1Q14028 1251 aaPredicted RBP17.95■□□□□ 0.46
HLA-DMB-258ENST00000418107 BCL11BQ9C0K0 894 aaPredicted RBP17.95■□□□□ 0.46
HLA-DMB-258ENST00000418107 CPSF1Q10570 1443 aaKnown RBP17.95■□□□□ 0.46
HLA-DMB-258ENST00000418107 SBNO2Q9Y2G9 1366 aa17.94■□□□□ 0.46
HLA-DMB-258ENST00000418107 MARCH10Q8NA82 808 aaPredicted RBP17.94■□□□□ 0.46
HLA-DMB-258ENST00000418107 EVC2Q86UK5 1308 aa17.93■□□□□ 0.46
HLA-DMB-258ENST00000418107 SOX12O15370 315 aa17.93■□□□□ 0.46
HLA-DMB-258ENST00000418107 WNK3Q9BYP7 1800 aa17.93■□□□□ 0.46
HLA-DMB-258ENST00000418107 CCER2I3L3R5 266 aa17.92■□□□□ 0.46
HLA-DMB-258ENST00000418107 ARHGEF25Q86VW2 580 aa17.92■□□□□ 0.46
HLA-DMB-258ENST00000418107 YTHDC1Q96MU7 727 aaKnown RBP17.92■□□□□ 0.46
HLA-DMB-258ENST00000418107 PDGFDQ9GZP0 370 aaPredicted RBP17.92■□□□□ 0.46
HLA-DMB-258ENST00000418107 TTC21BQ7Z4L5 1316 aa17.92■□□□□ 0.46
HLA-DMB-258ENST00000418107 DCAF8L1A6NGE4 600 aa17.91■□□□□ 0.46
HLA-DMB-258ENST00000418107 PROM2Q8N271 834 aa17.91■□□□□ 0.46
HLA-DMB-258ENST00000418107 CDCA7Q9BWT1 371 aaPredicted RBP17.91■□□□□ 0.46
HLA-DMB-258ENST00000418107 PANK3Q9H999 370 aa17.91■□□□□ 0.46
HLA-DMB-258ENST00000418107 CASZ1Q86V15 1759 aa17.91■□□□□ 0.46
HLA-DMB-258ENST00000418107 CSB-PGBD3P0DP91 1061 aa17.91■□□□□ 0.46
HLA-DMB-258ENST00000418107 BCL9O00512 1426 aa17.9■□□□□ 0.46
HLA-DMB-258ENST00000418107 ZBTB7AO95365 584 aa17.9■□□□□ 0.46
HLA-DMB-258ENST00000418107 KCNH5Q8NCM2 988 aa17.9■□□□□ 0.46
HLA-DMB-258ENST00000418107 CARD10Q9BWT7 1032 aa17.9■□□□□ 0.46
HLA-DMB-258ENST00000418107 PRKRIP1Q9H875 184 aaPredicted RBP17.9■□□□□ 0.46
HLA-DMB-258ENST00000418107 AKAP12Q02952 1782 aa17.88■□□□□ 0.45
HLA-DMB-258ENST00000418107 RGPD5Q99666 1765 aa17.88■□□□□ 0.45
HLA-DMB-258ENST00000418107 TMC1Q8TDI8 760 aa17.88■□□□□ 0.45
HLA-DMB-258ENST00000418107 ZNF692Q9BU19 519 aaPredicted RBP17.88■□□□□ 0.45
HLA-DMB-258ENST00000418107 TXNRD1Q16881 649 aa17.87■□□□□ 0.45
HLA-DMB-258ENST00000418107 KNSTRNQ9Y448 316 aa17.87■□□□□ 0.45
HLA-DMB-258ENST00000418107 TTC21AQ8NDW8 1320 aa17.86■□□□□ 0.45
HLA-DMB-258ENST00000418107 NFAT5O94916 1531 aa17.86■□□□□ 0.45
HLA-DMB-258ENST00000418107 EXOC5O00471 708 aa17.86■□□□□ 0.45
HLA-DMB-258ENST00000418107 ATF5Q9Y2D1 282 aaPredicted RBP17.86■□□□□ 0.45
HLA-DMB-258ENST00000418107 MYOM1P52179 1685 aa17.85■□□□□ 0.45
HLA-DMB-258ENST00000418107 PTGER2P43116 358 aa17.85■□□□□ 0.45
HLA-DMB-258ENST00000418107 STK32BQ9NY57 414 aa17.85■□□□□ 0.45
HLA-DMB-258ENST00000418107 KTN1Q86UP2 1357 aaKnown RBP17.84■□□□□ 0.45
HLA-DMB-258ENST00000418107 TNS2Q63HR2 1409 aa17.84■□□□□ 0.45
HLA-DMB-258ENST00000418107 UTRNP46939 3433 aa17.83■□□□□ 0.45
HLA-DMB-258ENST00000418107 SLC15A2Q16348 729 aa17.83■□□□□ 0.45
HLA-DMB-258ENST00000418107 PUS7Q96PZ0 661 aaKnown RBP17.83■□□□□ 0.45
HLA-DMB-258ENST00000418107 RALBP1Q15311 655 aa17.81■□□□□ 0.44
HLA-DMB-258ENST00000418107 ABCC6O95255 1503 aa17.81■□□□□ 0.44
HLA-DMB-258ENST00000418107 PER1O15534 1290 aaPredicted RBP17.8■□□□□ 0.44
HLA-DMB-258ENST00000418107 CC2D1BQ5T0F9 858 aaKnown RBP17.8■□□□□ 0.44
HLA-DMB-258ENST00000418107 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.8■□□□□ 0.44
HLA-DMB-258ENST00000418107 ACSBG1Q96GR2 724 aa17.8■□□□□ 0.44
HLA-DMB-258ENST00000418107 CENPBP07199 599 aaPredicted RBP17.79■□□□□ 0.44
HLA-DMB-258ENST00000418107 FHDC1Q9C0D6 1143 aaPredicted RBP17.79■□□□□ 0.44
HLA-DMB-258ENST00000418107 NHSQ6T4R5 1651 aa17.79■□□□□ 0.44
HLA-DMB-258ENST00000418107 MON2Q7Z3U7 1717 aa17.79■□□□□ 0.44
HLA-DMB-258ENST00000418107 MTFR1LQ9H019 292 aa17.79■□□□□ 0.44
HLA-DMB-258ENST00000418107 SLC12A5Q9H2X9 1139 aa17.79■□□□□ 0.44
HLA-DMB-258ENST00000418107 MRS2Q9HD23 443 aa17.79■□□□□ 0.44
HLA-DMB-258ENST00000418107 NLRP2Q9NX02 1062 aa17.79■□□□□ 0.44
HLA-DMB-258ENST00000418107 ERBB3P21860 1342 aa17.78■□□□□ 0.44
HLA-DMB-258ENST00000418107 NME9Q86XW9 330 aa17.78■□□□□ 0.44
HLA-DMB-258ENST00000418107 SYT17Q9BSW7 474 aa17.78■□□□□ 0.44
HLA-DMB-258ENST00000418107 USP31Q70CQ4 1352 aa17.77■□□□□ 0.44
HLA-DMB-258ENST00000418107 SGIP1Q9BQI5 828 aa17.77■□□□□ 0.43
HLA-DMB-258ENST00000418107 IL2RBP14784 551 aa17.76■□□□□ 0.43
HLA-DMB-258ENST00000418107 CD163L1Q9NR16 1453 aa17.75■□□□□ 0.43
HLA-DMB-258ENST00000418107 ZNF784Q8NCA9 323 aaPredicted RBP17.75■□□□□ 0.43
HLA-DMB-258ENST00000418107 MYBBP1AQ9BQG0 1328 aaKnown RBP17.75■□□□□ 0.43
HLA-DMB-258ENST00000418107 PAPPAQ13219 1627 aa17.75■□□□□ 0.43
HLA-DMB-258ENST00000418107 ANKRD24Q8TF21 1146 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms