RNA–Protein interactions for RNA: ENST00000417487.1

PDCL3P3-201, Transcript of phosducin-like 3 pseudogene 3, humanhuman

BASIC

Gene PDCL3P3, Length 715 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3P3-201ENST00000417487 BLMP54132 1417 aaPredicted RBP13.88□□□□□ -0.19
PDCL3P3-201ENST00000417487 NCBP3Q53F19 620 aaKnown RBP13.87□□□□□ -0.19
PDCL3P3-201ENST00000417487 MAP2P11137 1827 aaKnown RBP13.86□□□□□ -0.19
PDCL3P3-201ENST00000417487 ZBTB7CA1YPR0 619 aa13.86□□□□□ -0.19
PDCL3P3-201ENST00000417487 HAP1P54257 671 aaPredicted RBP13.86□□□□□ -0.19
PDCL3P3-201ENST00000417487 PLEKHF1Q96S99 279 aa13.86□□□□□ -0.19
PDCL3P3-201ENST00000417487 AXIN2Q9Y2T1 843 aa13.86□□□□□ -0.19
PDCL3P3-201ENST00000417487 EYA1Q99502 592 aa13.85□□□□□ -0.19
PDCL3P3-201ENST00000417487 RSPH6AQ9H0K4 717 aa13.85□□□□□ -0.19
PDCL3P3-201ENST00000417487 KIAA0232Q92628 1395 aa13.84□□□□□ -0.19
PDCL3P3-201ENST00000417487 APAF1O14727 1248 aa13.84□□□□□ -0.19
PDCL3P3-201ENST00000417487 CCDC146Q8IYE0 955 aa13.84□□□□□ -0.19
PDCL3P3-201ENST00000417487 ZBED9Q6R2W3 1325 aa13.84□□□□□ -0.19
PDCL3P3-201ENST00000417487 PEAK1Q9H792 1746 aa13.84□□□□□ -0.19
PDCL3P3-201ENST00000417487 SULT6B1Q6IMI4 303 aa13.83□□□□□ -0.2
PDCL3P3-201ENST00000417487 ANKRD24Q8TF21 1146 aa13.83□□□□□ -0.2
PDCL3P3-201ENST00000417487 LTV1Q96GA3 475 aaPredicted RBP13.83□□□□□ -0.2
PDCL3P3-201ENST00000417487 PRDM11Q9NQV5 511 aa13.83□□□□□ -0.2
PDCL3P3-201ENST00000417487 IGSF1Q8N6C5 1336 aa13.83□□□□□ -0.2
PDCL3P3-201ENST00000417487 SHPRHQ149N8 1683 aa13.82□□□□□ -0.2
PDCL3P3-201ENST00000417487 FAM83GA6ND36 823 aa13.82□□□□□ -0.2
PDCL3P3-201ENST00000417487 NEFMP07197 916 aa13.82□□□□□ -0.2
PDCL3P3-201ENST00000417487 HMOX1P09601 288 aa13.82□□□□□ -0.2
PDCL3P3-201ENST00000417487 CHRNA2Q15822 529 aa13.82□□□□□ -0.2
PDCL3P3-201ENST00000417487 TCP11L2Q8N4U5 519 aa13.82□□□□□ -0.2
PDCL3P3-201ENST00000417487 COL16A1Q07092 1604 aaPredicted RBP13.82□□□□□ -0.2
PDCL3P3-201ENST00000417487 PHRF1Q9P1Y6 1649 aaKnown RBP13.82□□□□□ -0.2
PDCL3P3-201ENST00000417487 JCADQ9P266 1359 aa13.82□□□□□ -0.2
PDCL3P3-201ENST00000417487 ABCC6O95255 1503 aa13.81□□□□□ -0.2
PDCL3P3-201ENST00000417487 CENPBP07199 599 aaPredicted RBP13.81□□□□□ -0.2
PDCL3P3-201ENST00000417487 PRKAR2BP31323 418 aa13.81□□□□□ -0.2
PDCL3P3-201ENST00000417487 NBPF6Q5VWK0 638 aa13.81□□□□□ -0.2
PDCL3P3-201ENST00000417487 NBPF4Q96M43 638 aa13.81□□□□□ -0.2
PDCL3P3-201ENST00000417487 AEBP1Q8IUX7 1158 aa13.8□□□□□ -0.2
PDCL3P3-201ENST00000417487 ERBB3P21860 1342 aa13.8□□□□□ -0.2
PDCL3P3-201ENST00000417487 MAPK8IP3Q9UPT6 1336 aa13.8□□□□□ -0.2
PDCL3P3-201ENST00000417487 KDRP35968 1356 aa13.8□□□□□ -0.2
PDCL3P3-201ENST00000417487 PHLPP1O60346 1717 aa13.79□□□□□ -0.2
PDCL3P3-201ENST00000417487 HSPA1LP34931 641 aa13.79□□□□□ -0.2
PDCL3P3-201ENST00000417487 TMPOP42166 694 aaKnown RBP13.79□□□□□ -0.2
PDCL3P3-201ENST00000417487 PDE3BQ13370 1112 aa13.79□□□□□ -0.2
PDCL3P3-201ENST00000417487 CCDC27Q2M243 656 aa13.79□□□□□ -0.2
PDCL3P3-201ENST00000417487 PHACTR3Q96KR7 559 aa13.79□□□□□ -0.2
PDCL3P3-201ENST00000417487 COL22A1Q8NFW1 1626 aaPredicted RBP13.79□□□□□ -0.2
PDCL3P3-201ENST00000417487 CRYBG1Q9Y4K1 1723 aa13.78□□□□□ -0.2
PDCL3P3-201ENST00000417487 PHF23Q9BUL5 403 aaPredicted RBP13.78□□□□□ -0.2
PDCL3P3-201ENST00000417487 NFE2L2Q16236 605 aa13.77□□□□□ -0.21
PDCL3P3-201ENST00000417487 SPATA31A6Q5VVP1 1343 aa13.77□□□□□ -0.21
PDCL3P3-201ENST00000417487 SALL2Q9Y467 1007 aaPredicted RBP13.77□□□□□ -0.21
PDCL3P3-201ENST00000417487 NCAPD2Q15021 1401 aa13.76□□□□□ -0.21
PDCL3P3-201ENST00000417487 WDR17Q8IZU2 1322 aa13.76□□□□□ -0.21
PDCL3P3-201ENST00000417487 ZNF521Q96K83 1311 aa13.76□□□□□ -0.21
PDCL3P3-201ENST00000417487 CSB-PGBD3P0DP91 1061 aa13.76□□□□□ -0.21
PDCL3P3-201ENST00000417487 EVA1CP58658 441 aa13.76□□□□□ -0.21
PDCL3P3-201ENST00000417487 NLRP2Q9NX02 1062 aa13.76□□□□□ -0.21
PDCL3P3-201ENST00000417487 COL18A1P39060 1754 aa13.76□□□□□ -0.21
PDCL3P3-201ENST00000417487 SENP3-EIF4A1A0A087X0R7 540 aa13.75□□□□□ -0.21
PDCL3P3-201ENST00000417487 NUTM2BA6NNL0 878 aaPredicted RBP13.75□□□□□ -0.21
PDCL3P3-201ENST00000417487 NUTM2EB1AL46 878 aaPredicted RBP13.75□□□□□ -0.21
PDCL3P3-201ENST00000417487 RIPK4P57078 832 aa13.75□□□□□ -0.21
PDCL3P3-201ENST00000417487 NUTM2AQ8IVF1 878 aaPredicted RBP13.75□□□□□ -0.21
PDCL3P3-201ENST00000417487 WDR63Q8IWG1 891 aa13.75□□□□□ -0.21
PDCL3P3-201ENST00000417487 WWC1Q8IX03 1113 aa13.75□□□□□ -0.21
PDCL3P3-201ENST00000417487 BTG4Q9NY30 223 aa13.75□□□□□ -0.21
PDCL3P3-201ENST00000417487 CAMTA1Q9Y6Y1 1673 aa13.75□□□□□ -0.21
PDCL3P3-201ENST00000417487 LTN1O94822 1766 aa13.74□□□□□ -0.21
PDCL3P3-201ENST00000417487 RGPD1P0DJD0 1748 aa13.74□□□□□ -0.21
PDCL3P3-201ENST00000417487 ADAMTS2O95450 1211 aa13.74□□□□□ -0.21
PDCL3P3-201ENST00000417487 NEUROD2Q15784 382 aa13.74□□□□□ -0.21
PDCL3P3-201ENST00000417487 USHBP1Q8N6Y0 703 aa13.74□□□□□ -0.21
PDCL3P3-201ENST00000417487 CARD10Q9BWT7 1032 aa13.74□□□□□ -0.21
PDCL3P3-201ENST00000417487 TRIM35Q9UPQ4 493 aa13.74□□□□□ -0.21
PDCL3P3-201ENST00000417487 RRP7AQ9Y3A4 280 aaKnown RBP13.74□□□□□ -0.21
PDCL3P3-201ENST00000417487 GOLGA2Q08379 1002 aa13.73□□□□□ -0.21
PDCL3P3-201ENST00000417487 AMOTQ4VCS5 1084 aa13.73□□□□□ -0.21
PDCL3P3-201ENST00000417487 PLEKHO1Q53GL0 409 aaPredicted RBP13.73□□□□□ -0.21
PDCL3P3-201ENST00000417487 TOM1L2Q6ZVM7 507 aa13.73□□□□□ -0.21
PDCL3P3-201ENST00000417487 GAS2L2Q8NHY3 880 aa13.73□□□□□ -0.21
PDCL3P3-201ENST00000417487 HTATSF1O43719 755 aaKnown RBP13.72□□□□□ -0.21
PDCL3P3-201ENST00000417487 LMOD3Q0VAK6 560 aa13.72□□□□□ -0.21
PDCL3P3-201ENST00000417487 MTHFSDQ2M296 383 aaKnown RBP13.72□□□□□ -0.21
PDCL3P3-201ENST00000417487 LARP1Q6PKG0 1096 aaKnown RBP13.72□□□□□ -0.21
PDCL3P3-201ENST00000417487 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.72□□□□□ -0.21
PDCL3P3-201ENST00000417487 COL5A2P05997 1499 aaPredicted RBP13.72□□□□□ -0.21
PDCL3P3-201ENST00000417487 PLEKHG2Q9H7P9 1386 aa13.71□□□□□ -0.21
PDCL3P3-201ENST00000417487 TRMT2AQ8IZ69 625 aaKnown RBP13.71□□□□□ -0.21
PDCL3P3-201ENST00000417487 RAPGEF4Q8WZA2 1011 aa13.71□□□□□ -0.21
PDCL3P3-201ENST00000417487 LMO7Q8WWI1 1683 aa13.71□□□□□ -0.21
PDCL3P3-201ENST00000417487 ABCA3Q99758 1704 aa13.7□□□□□ -0.22
PDCL3P3-201ENST00000417487 IL16Q14005 1332 aa13.7□□□□□ -0.22
PDCL3P3-201ENST00000417487 TATP17735 454 aaPredicted RBP13.7□□□□□ -0.22
PDCL3P3-201ENST00000417487 SLFN5Q08AF3 891 aa13.7□□□□□ -0.22
PDCL3P3-201ENST00000417487 FNBP4Q8N3X1 1017 aaPredicted RBP13.7□□□□□ -0.22
PDCL3P3-201ENST00000417487 STRN4Q9NRL3 753 aa13.7□□□□□ -0.22
PDCL3P3-201ENST00000417487 E9PSI1 815 aa13.69□□□□□ -0.22
PDCL3P3-201ENST00000417487 CALD1Q05682 793 aaKnown RBP13.69□□□□□ -0.22
PDCL3P3-201ENST00000417487 CDCA7LQ96GN5 454 aa13.69□□□□□ -0.22
PDCL3P3-201ENST00000417487 NGLY1Q96IV0 654 aa13.69□□□□□ -0.22
PDCL3P3-201ENST00000417487 COL14A1Q05707 1796 aaKnown RBP13.68□□□□□ -0.22
PDCL3P3-201ENST00000417487 CRB1P82279 1406 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms