RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 COL5A2P05997 1499 aaPredicted RBP23.97■■□□□ 1.43
COMMD3-BMI1-201ENST00000417470 MAP3K19Q56UN5 1328 aa23.97■■□□□ 1.43
COMMD3-BMI1-201ENST00000417470 IP6K1Q92551 441 aa23.97■■□□□ 1.43
COMMD3-BMI1-201ENST00000417470 CDK12Q9NYV4 1490 aaPredicted RBP23.96■■□□□ 1.43
COMMD3-BMI1-201ENST00000417470 EVA1CP58658 441 aa23.96■■□□□ 1.43
COMMD3-BMI1-201ENST00000417470 ANKRD26Q9UPS8 1709 aa23.96■■□□□ 1.43
COMMD3-BMI1-201ENST00000417470 RTL1A6NKG5 1358 aa23.95■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 SPATA31A5Q5VU36 1347 aa23.95■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 SPATA31A7Q8IWB4 1347 aa23.95■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 ZBTB7CA1YPR0 619 aa23.95■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 FBLN1P23142 703 aa23.95■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 BLMP54132 1417 aaPredicted RBP23.94■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 ONECUT3O60422 494 aaPredicted RBP23.94■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 MORC1Q86VD1 984 aa23.93■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 STRN4Q9NRL3 753 aa23.93■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 LTN1O94822 1766 aa23.93■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 WDR17Q8IZU2 1322 aa23.92■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 HOXC9P31274 260 aa23.92■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 RRS1Q15050 365 aaKnown RBP23.92■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 ILDR2Q71H61 639 aa23.92■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 SPATA31A1Q5TZJ5 1347 aa23.91■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 AMPHP49418 695 aa23.91■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 LARP1Q6PKG0 1096 aaKnown RBP23.91■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 GLI3P10071 1580 aa23.91■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 ERBB3P21860 1342 aa23.9■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 POLKQ9UBT6 870 aa23.9■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 THRAP3Q9Y2W1 955 aaKnown RBP23.9■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 CCDC9Q9Y3X0 531 aaKnown RBP23.9■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 CRB1P82279 1406 aa23.9■■□□□ 1.42
COMMD3-BMI1-201ENST00000417470 ZNF316A6NFI3 1004 aaPredicted RBP23.89■■□□□ 1.41
COMMD3-BMI1-201ENST00000417470 FLT4P35916 1363 aa23.89■■□□□ 1.41
COMMD3-BMI1-201ENST00000417470 BARGINQ6ZT62 677 aa23.87■■□□□ 1.41
COMMD3-BMI1-201ENST00000417470 CARD10Q9BWT7 1032 aa23.87■■□□□ 1.41
COMMD3-BMI1-201ENST00000417470 INSRP06213 1382 aa23.87■■□□□ 1.41
COMMD3-BMI1-201ENST00000417470 CC2D1BQ5T0F9 858 aaKnown RBP23.86■■□□□ 1.41
COMMD3-BMI1-201ENST00000417470 TCP11L2Q8N4U5 519 aa23.86■■□□□ 1.41
COMMD3-BMI1-201ENST00000417470 ANKRD24Q8TF21 1146 aa23.86■■□□□ 1.41
COMMD3-BMI1-201ENST00000417470 EMILIN1Q9Y6C2 1016 aa23.86■■□□□ 1.41
COMMD3-BMI1-201ENST00000417470 DDX10Q13206 875 aaKnown RBP23.85■■□□□ 1.41
COMMD3-BMI1-201ENST00000417470 TOM1L2Q6ZVM7 507 aa23.85■■□□□ 1.41
COMMD3-BMI1-201ENST00000417470 RGPD5Q99666 1765 aa23.85■■□□□ 1.41
COMMD3-BMI1-201ENST00000417470 SMG6Q86US8 1419 aaKnown RBP23.84■■□□□ 1.41
COMMD3-BMI1-201ENST00000417470 CSB-PGBD3P0DP91 1061 aa23.84■■□□□ 1.41
COMMD3-BMI1-201ENST00000417470 TNNT2P45379 298 aaPredicted RBP23.84■■□□□ 1.41
COMMD3-BMI1-201ENST00000417470 RGS12O14924 1447 aa23.84■■□□□ 1.41
COMMD3-BMI1-201ENST00000417470 MAP2P11137 1827 aaKnown RBP23.83■■□□□ 1.41
COMMD3-BMI1-201ENST00000417470 HSP90AB2PQ58FF8 381 aa23.83■■□□□ 1.41
COMMD3-BMI1-201ENST00000417470 PEAK1Q9H792 1746 aa23.82■■□□□ 1.4
COMMD3-BMI1-201ENST00000417470 FAM98CQ17RN3 349 aaKnown RBP23.81■■□□□ 1.4
COMMD3-BMI1-201ENST00000417470 SEPT12Q8IYM1 358 aa23.8■■□□□ 1.4
COMMD3-BMI1-201ENST00000417470 CDCA7Q9BWT1 371 aaPredicted RBP23.79■■□□□ 1.4
COMMD3-BMI1-201ENST00000417470 USP35Q9P2H5 1018 aa23.79■■□□□ 1.4
COMMD3-BMI1-201ENST00000417470 PPM1GO15355 546 aaPredicted RBP23.78■■□□□ 1.4
COMMD3-BMI1-201ENST00000417470 NLRP2Q9NX02 1062 aa23.78■■□□□ 1.4
COMMD3-BMI1-201ENST00000417470 FAM208AQ9UK61 1670 aaKnown RBP23.77■■□□□ 1.4
COMMD3-BMI1-201ENST00000417470 THSD7AQ9UPZ6 1657 aa23.76■■□□□ 1.39
COMMD3-BMI1-201ENST00000417470 LTV1Q96GA3 475 aaPredicted RBP23.76■■□□□ 1.39
COMMD3-BMI1-201ENST00000417470 MTHFSP49914 203 aa23.74■■□□□ 1.39
COMMD3-BMI1-201ENST00000417470 NBPF6Q5VWK0 638 aa23.74■■□□□ 1.39
COMMD3-BMI1-201ENST00000417470 NBPF4Q96M43 638 aa23.74■■□□□ 1.39
COMMD3-BMI1-201ENST00000417470 DISP2A7MBM2 1401 aa23.74■■□□□ 1.39
COMMD3-BMI1-201ENST00000417470 PARD3Q8TEW0 1356 aa23.73■■□□□ 1.39
COMMD3-BMI1-201ENST00000417470 EIF4A2Q14240 407 aaKnown RBP23.72■■□□□ 1.39
COMMD3-BMI1-201ENST00000417470 NCAPD2Q15021 1401 aa23.71■■□□□ 1.39
COMMD3-BMI1-201ENST00000417470 IL2RBP14784 551 aa23.7■■□□□ 1.38
COMMD3-BMI1-201ENST00000417470 RALBP1Q15311 655 aa23.7■■□□□ 1.38
COMMD3-BMI1-201ENST00000417470 KRT27Q7Z3Y8 459 aa23.7■■□□□ 1.38
COMMD3-BMI1-201ENST00000417470 A0A0G2JS52 829 aa23.69■■□□□ 1.38
COMMD3-BMI1-201ENST00000417470 PPP2R1AP30153 589 aa23.69■■□□□ 1.38
COMMD3-BMI1-201ENST00000417470 MYT1Q01538 1121 aa23.69■■□□□ 1.38
COMMD3-BMI1-201ENST00000417470 CNGB1Q14028 1251 aaPredicted RBP23.69■■□□□ 1.38
COMMD3-BMI1-201ENST00000417470 PARP4Q9UKK3 1724 aaKnown RBP23.68■■□□□ 1.38
COMMD3-BMI1-201ENST00000417470 EYA1Q99502 592 aa23.68■■□□□ 1.38
COMMD3-BMI1-201ENST00000417470 IL13P35225 146 aa23.67■■□□□ 1.38
COMMD3-BMI1-201ENST00000417470 DDB1Q16531 1140 aa23.66■■□□□ 1.38
COMMD3-BMI1-201ENST00000417470 BRWD3Q6RI45 1802 aa23.66■■□□□ 1.38
COMMD3-BMI1-201ENST00000417470 WNK3Q9BYP7 1800 aa23.66■■□□□ 1.38
COMMD3-BMI1-201ENST00000417470 IGSF1Q8N6C5 1336 aa23.65■■□□□ 1.38
COMMD3-BMI1-201ENST00000417470 EXOC5O00471 708 aa23.65■■□□□ 1.38
COMMD3-BMI1-201ENST00000417470 SOCS7O14512 581 aa23.65■■□□□ 1.38
COMMD3-BMI1-201ENST00000417470 PDE3BQ13370 1112 aa23.65■■□□□ 1.38
COMMD3-BMI1-201ENST00000417470 RGPD2P0DJD1 1756 aa23.64■■□□□ 1.37
COMMD3-BMI1-201ENST00000417470 PLEKHG2Q9H7P9 1386 aa23.64■■□□□ 1.37
COMMD3-BMI1-201ENST00000417470 DIAPH1O60610 1272 aaKnown RBP23.62■■□□□ 1.37
COMMD3-BMI1-201ENST00000417470 USHBP1Q8N6Y0 703 aa23.62■■□□□ 1.37
COMMD3-BMI1-201ENST00000417470 CFAP53Q96M91 514 aa23.62■■□□□ 1.37
COMMD3-BMI1-201ENST00000417470 TNS2Q63HR2 1409 aa23.61■■□□□ 1.37
COMMD3-BMI1-201ENST00000417470 RAPGEF4Q8WZA2 1011 aa23.61■■□□□ 1.37
COMMD3-BMI1-201ENST00000417470 LRRC37A3O60309 1634 aa23.61■■□□□ 1.37
COMMD3-BMI1-201ENST00000417470 COL3A1P02461 1466 aaPredicted RBP23.61■■□□□ 1.37
COMMD3-BMI1-201ENST00000417470 PRKRIP1Q9H875 184 aaPredicted RBP23.6■■□□□ 1.37
COMMD3-BMI1-201ENST00000417470 OVOS2A0A0G2JMS6 1433 aa23.59■■□□□ 1.37
COMMD3-BMI1-201ENST00000417470 BCL9O00512 1426 aa23.59■■□□□ 1.37
COMMD3-BMI1-201ENST00000417470 TATP17735 454 aaPredicted RBP23.59■■□□□ 1.37
COMMD3-BMI1-201ENST00000417470 FAM196AQ6ZSG2 479 aa23.59■■□□□ 1.37
COMMD3-BMI1-201ENST00000417470 MEGF6O75095 1541 aa23.59■■□□□ 1.37
COMMD3-BMI1-201ENST00000417470 KDRP35968 1356 aa23.58■■□□□ 1.37
COMMD3-BMI1-201ENST00000417470 EP400Q96L91 3159 aa23.58■■□□□ 1.36
COMMD3-BMI1-201ENST00000417470 CCDC125Q86Z20 511 aa23.57■■□□□ 1.36
COMMD3-BMI1-201ENST00000417470 MARCH10Q8NA82 808 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms