RNA–Protein interactions for RNA: ENST00000416098.1

NXF4-202, Transcript of nuclear RNA export factor 4 pseudogene, humanhuman

BASIC

Gene NXF4, Length 1,465 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF4-202ENST00000416098 TRAIPQ9BWF2 469 aa8.76□□□□□ -1.01
NXF4-202ENST00000416098 PTCRAQ6ISU1 281 aaPredicted RBP8.75□□□□□ -1.01
NXF4-202ENST00000416098 TBC1D9Q6ZT07 1266 aa8.75□□□□□ -1.01
NXF4-202ENST00000416098 CDAN1Q8IWY9 1227 aa8.75□□□□□ -1.01
NXF4-202ENST00000416098 KIF27Q86VH2 1401 aa8.75□□□□□ -1.01
NXF4-202ENST00000416098 FHAD1B1AJZ9 1412 aa8.74□□□□□ -1.01
NXF4-202ENST00000416098 OCSTAMPQ9BR26 566 aa8.74□□□□□ -1.01
NXF4-202ENST00000416098 CUL7Q14999 1698 aa8.73□□□□□ -1.01
NXF4-202ENST00000416098 IL21Q9HBE4 155 aa8.73□□□□□ -1.01
NXF4-202ENST00000416098 CLASP1Q7Z460 1538 aa8.73□□□□□ -1.01
NXF4-202ENST00000416098 GRIN2AQ12879 1464 aa8.73□□□□□ -1.01
NXF4-202ENST00000416098 CDCA8Q53HL2 280 aa8.72□□□□□ -1.01
NXF4-202ENST00000416098 PDXDC2PQ6P474 469 aa8.72□□□□□ -1.01
NXF4-202ENST00000416098 CCDC24Q8N4L8 307 aa8.72□□□□□ -1.01
NXF4-202ENST00000416098 ARMC2Q8NEN0 867 aa8.72□□□□□ -1.01
NXF4-202ENST00000416098 MAFBQ9Y5Q3 323 aaPredicted RBP8.72□□□□□ -1.01
NXF4-202ENST00000416098 PIK3CDO00329 1044 aa8.71□□□□□ -1.01
NXF4-202ENST00000416098 PTK2Q05397 1052 aa8.71□□□□□ -1.01
NXF4-202ENST00000416098 POTEGQ6S5H5 508 aa8.71□□□□□ -1.01
NXF4-202ENST00000416098 NKX2-3Q8TAU0 364 aa8.71□□□□□ -1.01
NXF4-202ENST00000416098 SLC6A16Q9GZN6 736 aa8.71□□□□□ -1.01
NXF4-202ENST00000416098 GPSM3Q9Y4H4 160 aa8.71□□□□□ -1.01
NXF4-202ENST00000416098 RIMBP3CA6NJZ7 1639 aa8.71□□□□□ -1.02
NXF4-202ENST00000416098 RIMBP3BA6NNM3 1639 aa8.71□□□□□ -1.02
NXF4-202ENST00000416098 RIMBP3Q9UFD9 1639 aa8.71□□□□□ -1.02
NXF4-202ENST00000416098 ATP9BO43861 1147 aa8.7□□□□□ -1.02
NXF4-202ENST00000416098 GPKOWQ92917 476 aaPredicted RBP eCLIP8.7□□□□□ -1.02
NXF4-202ENST00000416098 UNC93B1Q9H1C4 597 aa8.7□□□□□ -1.02
NXF4-202ENST00000416098 MYT1LQ9UL68 1186 aa8.7□□□□□ -1.02
NXF4-202ENST00000416098 ARHGEF11O15085 1522 aa8.7□□□□□ -1.02
NXF4-202ENST00000416098 NUP160Q12769 1436 aa8.69□□□□□ -1.02
NXF4-202ENST00000416098 NBPF14Q5TI25 921 aa8.69□□□□□ -1.02
NXF4-202ENST00000416098 CEP126Q9P2H0 1117 aa8.69□□□□□ -1.02
NXF4-202ENST00000416098 IGF1RP08069 1367 aa8.68□□□□□ -1.02
NXF4-202ENST00000416098 CEP170Q5SW79 1584 aa8.68□□□□□ -1.02
NXF4-202ENST00000416098 ZBTB7CA1YPR0 619 aa8.67□□□□□ -1.02
NXF4-202ENST00000416098 S1PR4O95977 384 aa8.67□□□□□ -1.02
NXF4-202ENST00000416098 FAM174AQ8TBP5 190 aa8.67□□□□□ -1.02
NXF4-202ENST00000416098 ADAM32Q8TC27 787 aa8.67□□□□□ -1.02
NXF4-202ENST00000416098 PCDHB9Q9Y5E1 797 aa8.67□□□□□ -1.02
NXF4-202ENST00000416098 KANK4Q5T7N3 995 aaPredicted RBP8.66□□□□□ -1.02
NXF4-202ENST00000416098 SH3BP5LQ7L8J4 393 aa8.66□□□□□ -1.02
NXF4-202ENST00000416098 AEBP1Q8IUX7 1158 aa8.66□□□□□ -1.02
NXF4-202ENST00000416098 NFATC2IPQ8NCF5 419 aa8.66□□□□□ -1.02
NXF4-202ENST00000416098 ARHGAP9Q9BRR9 750 aa8.66□□□□□ -1.02
NXF4-202ENST00000416098 SHROOM2Q13796 1616 aa8.65□□□□□ -1.02
NXF4-202ENST00000416098 CARNS1A5YM72 827 aa8.65□□□□□ -1.02
NXF4-202ENST00000416098 SKIP12755 728 aa8.65□□□□□ -1.02
NXF4-202ENST00000416098 PHTF2Q8N3S3 785 aa8.65□□□□□ -1.02
NXF4-202ENST00000416098 BAP1Q92560 729 aa8.65□□□□□ -1.02
NXF4-202ENST00000416098 VRTNQ9H8Y1 702 aa8.65□□□□□ -1.02
NXF4-202ENST00000416098 ATG7O95352 703 aa8.64□□□□□ -1.03
NXF4-202ENST00000416098 CSB-PGBD3P0DP91 1061 aa8.64□□□□□ -1.03
NXF4-202ENST00000416098 MCCD1P59942 119 aaPredicted RBP8.64□□□□□ -1.03
NXF4-202ENST00000416098 ZBTB33Q86T24 672 aa8.64□□□□□ -1.03
NXF4-202ENST00000416098 KCTD17Q8N5Z5 321 aa8.64□□□□□ -1.03
NXF4-202ENST00000416098 FCF1Q9Y324 198 aaKnown RBP8.64□□□□□ -1.03
NXF4-202ENST00000416098 CARMIL1Q5VZK9 1371 aa8.64□□□□□ -1.03
NXF4-202ENST00000416098 RUSC2Q8N2Y8 1516 aa8.64□□□□□ -1.03
NXF4-202ENST00000416098 PDE4CQ08493 712 aa8.64□□□□□ -1.03
NXF4-202ENST00000416098 DEPDC4Q8N2C3 294 aa8.64□□□□□ -1.03
NXF4-202ENST00000416098 USP17L3A6NCW0 530 aa8.63□□□□□ -1.03
NXF4-202ENST00000416098 USP17L4A6NCW7 530 aa8.63□□□□□ -1.03
NXF4-202ENST00000416098 USP17L5A8MUK1 530 aa8.63□□□□□ -1.03
NXF4-202ENST00000416098 SLFNL1Q499Z3 407 aa8.63□□□□□ -1.03
NXF4-202ENST00000416098 USP17L2Q6R6M4 530 aa8.63□□□□□ -1.03
NXF4-202ENST00000416098 USP17L1Q7RTZ2 530 aa8.63□□□□□ -1.03
NXF4-202ENST00000416098 SH3RF1Q7Z6J0 888 aa8.63□□□□□ -1.03
NXF4-202ENST00000416098 FOXJ1Q92949 421 aa8.63□□□□□ -1.03
NXF4-202ENST00000416098 PPEF1O14829 653 aaPredicted RBP8.62□□□□□ -1.03
NXF4-202ENST00000416098 TSGA10IPQ3SY00 556 aa8.62□□□□□ -1.03
NXF4-202ENST00000416098 LINC01559Q495D7 138 aa8.62□□□□□ -1.03
NXF4-202ENST00000416098 PLEKHM2Q8IWE5 1019 aa8.62□□□□□ -1.03
NXF4-202ENST00000416098 CARD14Q9BXL6 1004 aa8.62□□□□□ -1.03
NXF4-202ENST00000416098 USTQ9Y2C2 406 aa8.62□□□□□ -1.03
NXF4-202ENST00000416098 CCDC9Q9Y3X0 531 aaKnown RBP8.62□□□□□ -1.03
NXF4-202ENST00000416098 ARAP1Q96P48 1450 aa8.62□□□□□ -1.03
NXF4-202ENST00000416098 MAGEB6P1A0A0J9YX57 407 aa8.61□□□□□ -1.03
NXF4-202ENST00000416098 C4orf48Q5BLP8 95 aa8.61□□□□□ -1.03
NXF4-202ENST00000416098 RNF135Q8IUD6 432 aa8.61□□□□□ -1.03
NXF4-202ENST00000416098 ZNF592Q92610 1267 aa8.61□□□□□ -1.03
NXF4-202ENST00000416098 KIAA0586Q9BVV6 1533 aa8.61□□□□□ -1.03
NXF4-202ENST00000416098 DZIP3Q86Y13 1208 aaKnown RBP8.6□□□□□ -1.03
NXF4-202ENST00000416098 ZNF511Q8NB15 262 aa8.6□□□□□ -1.03
NXF4-202ENST00000416098 CHIC2Q9UKJ5 165 aa8.6□□□□□ -1.03
NXF4-202ENST00000416098 EEA1Q15075 1411 aa8.6□□□□□ -1.03
NXF4-202ENST00000416098 RAPGEF2Q9Y4G8 1499 aa8.6□□□□□ -1.03
NXF4-202ENST00000416098 TMEM88BA6NKF7 163 aa8.59□□□□□ -1.03
NXF4-202ENST00000416098 AGERQ15109 404 aa8.59□□□□□ -1.03
NXF4-202ENST00000416098 ERFEQ4G0M1 354 aa8.59□□□□□ -1.03
NXF4-202ENST00000416098 BPHLQ86WA6 291 aaPredicted RBP8.59□□□□□ -1.03
NXF4-202ENST00000416098 PLPP7Q8NBV4 271 aa8.59□□□□□ -1.03
NXF4-202ENST00000416098 MKRN1Q9UHC7 482 aaKnown RBP8.59□□□□□ -1.03
NXF4-202ENST00000416098 NCOA4Q13772 614 aa8.58□□□□□ -1.04
NXF4-202ENST00000416098 GIGYF1O75420 1035 aaPredicted RBP8.57□□□□□ -1.04
NXF4-202ENST00000416098 SH3BP2P78314 561 aa8.57□□□□□ -1.04
NXF4-202ENST00000416098 KCNC4Q03721 635 aa8.57□□□□□ -1.04
NXF4-202ENST00000416098 CYB5RLQ6IPT4 315 aa8.57□□□□□ -1.04
NXF4-202ENST00000416098 HCSTQ9UBK5 93 aa8.57□□□□□ -1.04
NXF4-202ENST00000416098 CTTNBP2Q8WZ74 1663 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms