RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 NWD2Q9ULI1 1742 aa13.59□□□□□ -0.23
LINC01090-201ENST00000415357 NRKQ7Z2Y5 1582 aa13.58□□□□□ -0.23
LINC01090-201ENST00000415357 COL14A1Q05707 1796 aaKnown RBP13.58□□□□□ -0.23
LINC01090-201ENST00000415357 ABTB2Q8N961 1025 aa13.58□□□□□ -0.24
LINC01090-201ENST00000415357 GJD4Q96KN9 370 aaPredicted RBP13.58□□□□□ -0.24
LINC01090-201ENST00000415357 CLSPNQ9HAW4 1339 aa13.58□□□□□ -0.24
LINC01090-201ENST00000415357 AKAP12Q02952 1782 aa13.58□□□□□ -0.24
LINC01090-201ENST00000415357 ATAD2Q6PL18 1390 aa13.58□□□□□ -0.24
LINC01090-201ENST00000415357 KIAA0232Q92628 1395 aa13.58□□□□□ -0.24
LINC01090-201ENST00000415357 ST20-MTHFSA0A0A6YYL1 179 aa13.57□□□□□ -0.24
LINC01090-201ENST00000415357 CCER1Q8TC90 406 aaPredicted RBP13.57□□□□□ -0.24
LINC01090-201ENST00000415357 BTG4Q9NY30 223 aa13.57□□□□□ -0.24
LINC01090-201ENST00000415357 PIK3C2AO00443 1686 aa13.56□□□□□ -0.24
LINC01090-201ENST00000415357 SSH2Q76I76 1423 aa13.56□□□□□ -0.24
LINC01090-201ENST00000415357 ZC3H6P61129 1189 aaKnown RBP13.56□□□□□ -0.24
LINC01090-201ENST00000415357 CHRNA2Q15822 529 aa13.56□□□□□ -0.24
LINC01090-201ENST00000415357 KIF12Q96FN5 646 aa13.56□□□□□ -0.24
LINC01090-201ENST00000415357 PRDM11Q9NQV5 511 aa13.56□□□□□ -0.24
LINC01090-201ENST00000415357 USP19O94966 1318 aa13.56□□□□□ -0.24
LINC01090-201ENST00000415357 MAP3K13O43283 966 aa13.55□□□□□ -0.24
LINC01090-201ENST00000415357 UPF1Q92900 1129 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC01090-201ENST00000415357 TESK2Q96S53 571 aa13.55□□□□□ -0.24
LINC01090-201ENST00000415357 CCDC9Q9Y3X0 531 aaKnown RBP13.55□□□□□ -0.24
LINC01090-201ENST00000415357 USP47Q96K76 1375 aa13.55□□□□□ -0.24
LINC01090-201ENST00000415357 VPS72Q15906 364 aa13.54□□□□□ -0.24
LINC01090-201ENST00000415357 BRD4O60885 1362 aaPredicted RBP13.54□□□□□ -0.24
LINC01090-201ENST00000415357 CPSF1Q10570 1443 aaKnown RBP13.54□□□□□ -0.24
LINC01090-201ENST00000415357 CD163L1Q9NR16 1453 aa13.54□□□□□ -0.24
LINC01090-201ENST00000415357 MON2Q7Z3U7 1717 aa13.53□□□□□ -0.24
LINC01090-201ENST00000415357 TMC1Q8TDI8 760 aa13.53□□□□□ -0.24
LINC01090-201ENST00000415357 PCDHB13Q9Y5F0 798 aa13.53□□□□□ -0.24
LINC01090-201ENST00000415357 TTC21BQ7Z4L5 1316 aa13.53□□□□□ -0.24
LINC01090-201ENST00000415357 KTN1Q86UP2 1357 aaKnown RBP13.53□□□□□ -0.24
LINC01090-201ENST00000415357 EP400Q96L91 3159 aa13.53□□□□□ -0.24
LINC01090-201ENST00000415357 CHRM1P11229 460 aaPredicted RBP13.52□□□□□ -0.25
LINC01090-201ENST00000415357 NLRP6P59044 892 aa13.52□□□□□ -0.25
LINC01090-201ENST00000415357 NLRP13Q86W25 1043 aa13.52□□□□□ -0.25
LINC01090-201ENST00000415357 SLC12A5Q9H2X9 1139 aa13.52□□□□□ -0.25
LINC01090-201ENST00000415357 TIMELESSQ9UNS1 1208 aa13.52□□□□□ -0.25
LINC01090-201ENST00000415357 SLIT3O75094 1523 aa13.52□□□□□ -0.25
LINC01090-201ENST00000415357 ZBTB7CA1YPR0 619 aa13.51□□□□□ -0.25
LINC01090-201ENST00000415357 GCP02774 474 aa13.51□□□□□ -0.25
LINC01090-201ENST00000415357 SP7Q8TDD2 431 aaPredicted RBP13.51□□□□□ -0.25
LINC01090-201ENST00000415357 LMO7Q8WWI1 1683 aa13.5□□□□□ -0.25
LINC01090-201ENST00000415357 CPDO75976 1380 aa13.5□□□□□ -0.25
LINC01090-201ENST00000415357 STRN4Q9NRL3 753 aa13.5□□□□□ -0.25
LINC01090-201ENST00000415357 BRWD3Q6RI45 1802 aa13.5□□□□□ -0.25
LINC01090-201ENST00000415357 CAMTA1Q9Y6Y1 1673 aa13.5□□□□□ -0.25
LINC01090-201ENST00000415357 A0A1W2PP64 1363 aa13.49□□□□□ -0.25
LINC01090-201ENST00000415357 RGL2O15211 777 aa13.49□□□□□ -0.25
LINC01090-201ENST00000415357 SOX12O15370 315 aa13.49□□□□□ -0.25
LINC01090-201ENST00000415357 FAM98CQ17RN3 349 aaKnown RBP13.49□□□□□ -0.25
LINC01090-201ENST00000415357 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.49□□□□□ -0.25
LINC01090-201ENST00000415357 SEPT12Q8IYM1 358 aa13.49□□□□□ -0.25
LINC01090-201ENST00000415357 MS4A3Q96HJ5 214 aa13.49□□□□□ -0.25
LINC01090-201ENST00000415357 SPATA31A5Q5VU36 1347 aa13.48□□□□□ -0.25
LINC01090-201ENST00000415357 SPATA31A7Q8IWB4 1347 aa13.48□□□□□ -0.25
LINC01090-201ENST00000415357 TTC21AQ8NDW8 1320 aa13.48□□□□□ -0.25
LINC01090-201ENST00000415357 A0A0G2JS52 829 aa13.48□□□□□ -0.25
LINC01090-201ENST00000415357 MYT1Q01538 1121 aa13.48□□□□□ -0.25
LINC01090-201ENST00000415357 GALR2O43603 387 aaPredicted RBP13.47□□□□□ -0.25
LINC01090-201ENST00000415357 HDGFL2Q7Z4V5 671 aaPredicted RBP13.47□□□□□ -0.25
LINC01090-201ENST00000415357 NME9Q86XW9 330 aa13.47□□□□□ -0.25
LINC01090-201ENST00000415357 RNF25Q96BH1 459 aaPredicted RBP13.47□□□□□ -0.25
LINC01090-201ENST00000415357 NFAT5O94916 1531 aa13.46□□□□□ -0.25
LINC01090-201ENST00000415357 TMF1P82094 1093 aa13.46□□□□□ -0.25
LINC01090-201ENST00000415357 IFNL1Q8IU54 200 aa13.46□□□□□ -0.25
LINC01090-201ENST00000415357 PUS7Q96PZ0 661 aaKnown RBP13.46□□□□□ -0.25
LINC01090-201ENST00000415357 PCDHB8Q9UN66 801 aa13.46□□□□□ -0.25
LINC01090-201ENST00000415357 EDC4Q6P2E9 1401 aaKnown RBP13.46□□□□□ -0.26
LINC01090-201ENST00000415357 SPATA31A1Q5TZJ5 1347 aa13.45□□□□□ -0.26
LINC01090-201ENST00000415357 THSD7AQ9UPZ6 1657 aa13.45□□□□□ -0.26
LINC01090-201ENST00000415357 COL5A2P05997 1499 aaPredicted RBP13.45□□□□□ -0.26
LINC01090-201ENST00000415357 ONECUT3O60422 494 aaPredicted RBP13.45□□□□□ -0.26
LINC01090-201ENST00000415357 GABBR2O75899 941 aa13.45□□□□□ -0.26
LINC01090-201ENST00000415357 LARP1Q6PKG0 1096 aaKnown RBP13.45□□□□□ -0.26
LINC01090-201ENST00000415357 TERF2IPQ9NYB0 399 aa13.45□□□□□ -0.26
LINC01090-201ENST00000415357 USP35Q9P2H5 1018 aa13.45□□□□□ -0.26
LINC01090-201ENST00000415357 USP54Q70EL1 1684 aa13.44□□□□□ -0.26
LINC01090-201ENST00000415357 EVA1CP58658 441 aa13.44□□□□□ -0.26
LINC01090-201ENST00000415357 ZNF467Q7Z7K2 595 aaPredicted RBP13.44□□□□□ -0.26
LINC01090-201ENST00000415357 SGIP1Q9BQI5 828 aa13.44□□□□□ -0.26
LINC01090-201ENST00000415357 COL18A1P39060 1754 aa13.44□□□□□ -0.26
LINC01090-201ENST00000415357 AATKQ6ZMQ8 1374 aa13.44□□□□□ -0.26
LINC01090-201ENST00000415357 USP31Q70CQ4 1352 aa13.44□□□□□ -0.26
LINC01090-201ENST00000415357 NINLQ9Y2I6 1382 aa13.44□□□□□ -0.26
LINC01090-201ENST00000415357 RIOK3O14730 519 aaKnown RBP13.42□□□□□ -0.26
LINC01090-201ENST00000415357 SLC24A1O60721 1099 aa13.42□□□□□ -0.26
LINC01090-201ENST00000415357 CLCN6P51797 869 aa13.42□□□□□ -0.26
LINC01090-201ENST00000415357 KRT27Q7Z3Y8 459 aa13.42□□□□□ -0.26
LINC01090-201ENST00000415357 ARHGEF25Q86VW2 580 aa13.42□□□□□ -0.26
LINC01090-201ENST00000415357 KCNH5Q8NCM2 988 aa13.42□□□□□ -0.26
LINC01090-201ENST00000415357 AXIN2Q9Y2T1 843 aa13.42□□□□□ -0.26
LINC01090-201ENST00000415357 MYOM1P52179 1685 aa13.42□□□□□ -0.26
LINC01090-201ENST00000415357 ANKRD36BQ8N2N9 1353 aa13.42□□□□□ -0.26
LINC01090-201ENST00000415357 OVOS2A0A0J9YW53 1432 aa13.41□□□□□ -0.26
LINC01090-201ENST00000415357 OVOS2Q6IE36 1432 aa13.41□□□□□ -0.26
LINC01090-201ENST00000415357 RGPD5Q99666 1765 aa13.41□□□□□ -0.26
LINC01090-201ENST00000415357 FAM182BQ5T319 152 aa13.41□□□□□ -0.26
LINC01090-201ENST00000415357 CRB1P82279 1406 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms