RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 AXIN2Q9Y2T1 843 aa22.52■■□□□ 1.2
LINC00398-201ENST00000414407 MAP3K19Q56UN5 1328 aa22.52■■□□□ 1.2
LINC00398-201ENST00000414407 EVA1CP58658 441 aa22.51■■□□□ 1.19
LINC00398-201ENST00000414407 KIF24Q5T7B8 1368 aa22.5■■□□□ 1.19
LINC00398-201ENST00000414407 COL5A2P05997 1499 aaPredicted RBP22.5■■□□□ 1.19
LINC00398-201ENST00000414407 IP6K1Q92551 441 aa22.5■■□□□ 1.19
LINC00398-201ENST00000414407 RTL1A6NKG5 1358 aa22.5■■□□□ 1.19
LINC00398-201ENST00000414407 BLMP54132 1417 aaPredicted RBP22.49■■□□□ 1.19
LINC00398-201ENST00000414407 LTN1O94822 1766 aa22.49■■□□□ 1.19
LINC00398-201ENST00000414407 MORC1Q86VD1 984 aa22.49■■□□□ 1.19
LINC00398-201ENST00000414407 STRN4Q9NRL3 753 aa22.49■■□□□ 1.19
LINC00398-201ENST00000414407 CDK12Q9NYV4 1490 aaPredicted RBP22.48■■□□□ 1.19
LINC00398-201ENST00000414407 FBLN1P23142 703 aa22.48■■□□□ 1.19
LINC00398-201ENST00000414407 AMPHP49418 695 aa22.48■■□□□ 1.19
LINC00398-201ENST00000414407 SPATA31A5Q5VU36 1347 aa22.48■■□□□ 1.19
LINC00398-201ENST00000414407 SPATA31A7Q8IWB4 1347 aa22.48■■□□□ 1.19
LINC00398-201ENST00000414407 ZNF316A6NFI3 1004 aaPredicted RBP22.47■■□□□ 1.19
LINC00398-201ENST00000414407 RRS1Q15050 365 aaKnown RBP22.47■■□□□ 1.19
LINC00398-201ENST00000414407 HOXC9P31274 260 aa22.46■■□□□ 1.19
LINC00398-201ENST00000414407 CCDC9Q9Y3X0 531 aaKnown RBP22.46■■□□□ 1.19
LINC00398-201ENST00000414407 WDR17Q8IZU2 1322 aa22.46■■□□□ 1.19
LINC00398-201ENST00000414407 LARP1Q6PKG0 1096 aaKnown RBP22.45■■□□□ 1.18
LINC00398-201ENST00000414407 SPATA31A1Q5TZJ5 1347 aa22.45■■□□□ 1.18
LINC00398-201ENST00000414407 ONECUT3O60422 494 aaPredicted RBP22.44■■□□□ 1.18
LINC00398-201ENST00000414407 GLI3P10071 1580 aa22.44■■□□□ 1.18
LINC00398-201ENST00000414407 ERBB3P21860 1342 aa22.44■■□□□ 1.18
LINC00398-201ENST00000414407 FLT4P35916 1363 aa22.44■■□□□ 1.18
LINC00398-201ENST00000414407 CRB1P82279 1406 aa22.44■■□□□ 1.18
LINC00398-201ENST00000414407 POLKQ9UBT6 870 aa22.44■■□□□ 1.18
LINC00398-201ENST00000414407 DDX10Q13206 875 aaKnown RBP22.43■■□□□ 1.18
LINC00398-201ENST00000414407 CC2D1BQ5T0F9 858 aaKnown RBP22.43■■□□□ 1.18
LINC00398-201ENST00000414407 TNNT2P45379 298 aaPredicted RBP22.42■■□□□ 1.18
LINC00398-201ENST00000414407 THRAP3Q9Y2W1 955 aaKnown RBP22.42■■□□□ 1.18
LINC00398-201ENST00000414407 EMILIN1Q9Y6C2 1016 aa22.42■■□□□ 1.18
LINC00398-201ENST00000414407 INSRP06213 1382 aa22.41■■□□□ 1.18
LINC00398-201ENST00000414407 RGPD5Q99666 1765 aa22.41■■□□□ 1.18
LINC00398-201ENST00000414407 CSB-PGBD3P0DP91 1061 aa22.41■■□□□ 1.18
LINC00398-201ENST00000414407 ILDR2Q71H61 639 aa22.41■■□□□ 1.18
LINC00398-201ENST00000414407 ANKRD24Q8TF21 1146 aa22.41■■□□□ 1.18
LINC00398-201ENST00000414407 SMG6Q86US8 1419 aaKnown RBP22.4■■□□□ 1.18
LINC00398-201ENST00000414407 BARGINQ6ZT62 677 aa22.4■■□□□ 1.18
LINC00398-201ENST00000414407 TOM1L2Q6ZVM7 507 aa22.4■■□□□ 1.18
LINC00398-201ENST00000414407 CARD10Q9BWT7 1032 aa22.4■■□□□ 1.18
LINC00398-201ENST00000414407 MAP2P11137 1827 aaKnown RBP22.39■■□□□ 1.17
LINC00398-201ENST00000414407 TCP11L2Q8N4U5 519 aa22.39■■□□□ 1.17
LINC00398-201ENST00000414407 PEAK1Q9H792 1746 aa22.38■■□□□ 1.17
LINC00398-201ENST00000414407 HSP90AB2PQ58FF8 381 aa22.38■■□□□ 1.17
LINC00398-201ENST00000414407 RGS12O14924 1447 aa22.38■■□□□ 1.17
LINC00398-201ENST00000414407 PPM1GO15355 546 aaPredicted RBP22.37■■□□□ 1.17
LINC00398-201ENST00000414407 FAM98CQ17RN3 349 aaKnown RBP22.36■■□□□ 1.17
LINC00398-201ENST00000414407 USP35Q9P2H5 1018 aa22.36■■□□□ 1.17
LINC00398-201ENST00000414407 NLRP2Q9NX02 1062 aa22.35■■□□□ 1.17
LINC00398-201ENST00000414407 FAM208AQ9UK61 1670 aaKnown RBP22.35■■□□□ 1.17
LINC00398-201ENST00000414407 SEPT12Q8IYM1 358 aa22.34■■□□□ 1.17
LINC00398-201ENST00000414407 LTV1Q96GA3 475 aaPredicted RBP22.34■■□□□ 1.17
LINC00398-201ENST00000414407 CDCA7Q9BWT1 371 aaPredicted RBP22.33■■□□□ 1.17
LINC00398-201ENST00000414407 THSD7AQ9UPZ6 1657 aa22.31■■□□□ 1.16
LINC00398-201ENST00000414407 MTHFSP49914 203 aa22.31■■□□□ 1.16
LINC00398-201ENST00000414407 CNGB1Q14028 1251 aaPredicted RBP22.31■■□□□ 1.16
LINC00398-201ENST00000414407 PARD3Q8TEW0 1356 aa22.3■■□□□ 1.16
LINC00398-201ENST00000414407 A0A0G2JS52 829 aa22.28■■□□□ 1.16
LINC00398-201ENST00000414407 MYT1Q01538 1121 aa22.28■■□□□ 1.16
LINC00398-201ENST00000414407 EIF4A2Q14240 407 aaKnown RBP22.28■■□□□ 1.16
LINC00398-201ENST00000414407 NBPF6Q5VWK0 638 aa22.28■■□□□ 1.16
LINC00398-201ENST00000414407 NBPF4Q96M43 638 aa22.28■■□□□ 1.16
LINC00398-201ENST00000414407 DISP2A7MBM2 1401 aa22.28■■□□□ 1.16
LINC00398-201ENST00000414407 RALBP1Q15311 655 aa22.27■■□□□ 1.16
LINC00398-201ENST00000414407 PPP2R1AP30153 589 aa22.26■■□□□ 1.15
LINC00398-201ENST00000414407 NCAPD2Q15021 1401 aa22.25■■□□□ 1.15
LINC00398-201ENST00000414407 IL2RBP14784 551 aa22.25■■□□□ 1.15
LINC00398-201ENST00000414407 KRT27Q7Z3Y8 459 aa22.25■■□□□ 1.15
LINC00398-201ENST00000414407 PARP4Q9UKK3 1724 aaKnown RBP22.24■■□□□ 1.15
LINC00398-201ENST00000414407 EYA1Q99502 592 aa22.24■■□□□ 1.15
LINC00398-201ENST00000414407 WNK3Q9BYP7 1800 aa22.23■■□□□ 1.15
LINC00398-201ENST00000414407 IL13P35225 146 aa22.22■■□□□ 1.15
LINC00398-201ENST00000414407 DDB1Q16531 1140 aa22.22■■□□□ 1.15
LINC00398-201ENST00000414407 RGPD2P0DJD1 1756 aa22.21■■□□□ 1.15
LINC00398-201ENST00000414407 PDE3BQ13370 1112 aa22.21■■□□□ 1.15
LINC00398-201ENST00000414407 CFAP53Q96M91 514 aa22.21■■□□□ 1.15
LINC00398-201ENST00000414407 BRWD3Q6RI45 1802 aa22.21■■□□□ 1.15
LINC00398-201ENST00000414407 IGSF1Q8N6C5 1336 aa22.21■■□□□ 1.15
LINC00398-201ENST00000414407 EXOC5O00471 708 aa22.2■■□□□ 1.14
LINC00398-201ENST00000414407 DIAPH1O60610 1272 aaKnown RBP22.2■■□□□ 1.14
LINC00398-201ENST00000414407 USHBP1Q8N6Y0 703 aa22.19■■□□□ 1.14
LINC00398-201ENST00000414407 RAPGEF4Q8WZA2 1011 aa22.19■■□□□ 1.14
LINC00398-201ENST00000414407 LRRC37A3O60309 1634 aa22.18■■□□□ 1.14
LINC00398-201ENST00000414407 COL3A1P02461 1466 aaPredicted RBP22.18■■□□□ 1.14
LINC00398-201ENST00000414407 PLEKHG2Q9H7P9 1386 aa22.18■■□□□ 1.14
LINC00398-201ENST00000414407 SOCS7O14512 581 aa22.18■■□□□ 1.14
LINC00398-201ENST00000414407 PRKRIP1Q9H875 184 aaPredicted RBP22.18■■□□□ 1.14
LINC00398-201ENST00000414407 TNS2Q63HR2 1409 aa22.17■■□□□ 1.14
LINC00398-201ENST00000414407 OVOS2A0A0G2JMS6 1433 aa22.16■■□□□ 1.14
LINC00398-201ENST00000414407 MYBBP1AQ9BQG0 1328 aaKnown RBP22.16■■□□□ 1.14
LINC00398-201ENST00000414407 TATP17735 454 aaPredicted RBP22.16■■□□□ 1.14
LINC00398-201ENST00000414407 MEGF6O75095 1541 aa22.16■■□□□ 1.14
LINC00398-201ENST00000414407 RGPD1P0DJD0 1748 aa22.14■■□□□ 1.14
LINC00398-201ENST00000414407 FAM196AQ6ZSG2 479 aa22.14■■□□□ 1.13
LINC00398-201ENST00000414407 KDRP35968 1356 aa22.13■■□□□ 1.13
LINC00398-201ENST00000414407 ZCRB1Q8TBF4 217 aaKnown RBP22.13■■□□□ 1.13
LINC00398-201ENST00000414407 BCL9O00512 1426 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms