RNA–Protein interactions for RNA: ENST00000413437.1

CSTF2-202, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 5

Gene CSTF2, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-202ENST00000413437 GJD4Q96KN9 370 aaPredicted RBP10.64□□□□□ -0.71
CSTF2-202ENST00000413437 CCDC9Q9Y3X0 531 aaKnown RBP10.64□□□□□ -0.71
CSTF2-202ENST00000413437 AATKQ6ZMQ8 1374 aa10.64□□□□□ -0.71
CSTF2-202ENST00000413437 MAP3K19Q56UN5 1328 aa10.63□□□□□ -0.71
CSTF2-202ENST00000413437 LTN1O94822 1766 aa10.63□□□□□ -0.71
CSTF2-202ENST00000413437 TNNT2P45379 298 aaPredicted RBP10.63□□□□□ -0.71
CSTF2-202ENST00000413437 CGNL1Q0VF96 1302 aa10.62□□□□□ -0.71
CSTF2-202ENST00000413437 RGS12O14924 1447 aa10.62□□□□□ -0.71
CSTF2-202ENST00000413437 EVA1CP58658 441 aa10.62□□□□□ -0.71
CSTF2-202ENST00000413437 AMER1Q5JTC6 1135 aaPredicted RBP10.62□□□□□ -0.71
CSTF2-202ENST00000413437 USP35Q9P2H5 1018 aa10.62□□□□□ -0.71
CSTF2-202ENST00000413437 COL5A2P05997 1499 aaPredicted RBP10.61□□□□□ -0.71
CSTF2-202ENST00000413437 PEAK1Q9H792 1746 aa10.61□□□□□ -0.71
CSTF2-202ENST00000413437 SPATA31A5Q5VU36 1347 aa10.61□□□□□ -0.71
CSTF2-202ENST00000413437 SPATA31A7Q8IWB4 1347 aa10.61□□□□□ -0.71
CSTF2-202ENST00000413437 FAM98CQ17RN3 349 aaKnown RBP10.61□□□□□ -0.71
CSTF2-202ENST00000413437 LTV1Q96GA3 475 aaPredicted RBP10.61□□□□□ -0.71
CSTF2-202ENST00000413437 KNSTRNQ9Y448 316 aa10.61□□□□□ -0.71
CSTF2-202ENST00000413437 EMILIN1Q9Y6C2 1016 aa10.61□□□□□ -0.71
CSTF2-202ENST00000413437 SPATA31A1Q5TZJ5 1347 aa10.6□□□□□ -0.71
CSTF2-202ENST00000413437 CC2D1BQ5T0F9 858 aaKnown RBP10.6□□□□□ -0.71
CSTF2-202ENST00000413437 IP6K1Q92551 441 aa10.6□□□□□ -0.71
CSTF2-202ENST00000413437 ANKRD26Q9UPS8 1709 aa10.59□□□□□ -0.71
CSTF2-202ENST00000413437 HOXC9P31274 260 aa10.59□□□□□ -0.71
CSTF2-202ENST00000413437 HSP90AB2PQ58FF8 381 aa10.59□□□□□ -0.71
CSTF2-202ENST00000413437 SEPT12Q8IYM1 358 aa10.59□□□□□ -0.71
CSTF2-202ENST00000413437 ANKRD24Q8TF21 1146 aa10.59□□□□□ -0.71
CSTF2-202ENST00000413437 AMPHP49418 695 aa10.58□□□□□ -0.72
CSTF2-202ENST00000413437 DDX10Q13206 875 aaKnown RBP10.58□□□□□ -0.72
CSTF2-202ENST00000413437 FAM182BQ5T319 152 aa10.58□□□□□ -0.72
CSTF2-202ENST00000413437 TOM1L2Q6ZVM7 507 aa10.58□□□□□ -0.72
CSTF2-202ENST00000413437 MORC1Q86VD1 984 aa10.58□□□□□ -0.72
CSTF2-202ENST00000413437 POLKQ9UBT6 870 aa10.58□□□□□ -0.72
CSTF2-202ENST00000413437 BRWD3Q6RI45 1802 aa10.58□□□□□ -0.72
CSTF2-202ENST00000413437 WDR17Q8IZU2 1322 aa10.58□□□□□ -0.72
CSTF2-202ENST00000413437 RGPD2P0DJD1 1756 aa10.57□□□□□ -0.72
CSTF2-202ENST00000413437 MAP2P11137 1827 aaKnown RBP10.57□□□□□ -0.72
CSTF2-202ENST00000413437 PPM1GO15355 546 aaPredicted RBP10.57□□□□□ -0.72
CSTF2-202ENST00000413437 ONECUT3O60422 494 aaPredicted RBP10.57□□□□□ -0.72
CSTF2-202ENST00000413437 CSB-PGBD3P0DP91 1061 aa10.57□□□□□ -0.72
CSTF2-202ENST00000413437 CRB1P82279 1406 aa10.57□□□□□ -0.72
CSTF2-202ENST00000413437 CDK12Q9NYV4 1490 aaPredicted RBP10.56□□□□□ -0.72
CSTF2-202ENST00000413437 USHBP1Q8N6Y0 703 aa10.56□□□□□ -0.72
CSTF2-202ENST00000413437 NLRP2Q9NX02 1062 aa10.56□□□□□ -0.72
CSTF2-202ENST00000413437 ERBB3P21860 1342 aa10.56□□□□□ -0.72
CSTF2-202ENST00000413437 THSD7AQ9UPZ6 1657 aa10.55□□□□□ -0.72
CSTF2-202ENST00000413437 A0A0G2JS52 829 aa10.55□□□□□ -0.72
CSTF2-202ENST00000413437 MYT1Q01538 1121 aa10.55□□□□□ -0.72
CSTF2-202ENST00000413437 TCP11L2Q8N4U5 519 aa10.55□□□□□ -0.72
CSTF2-202ENST00000413437 NSD2O96028 1365 aa10.54□□□□□ -0.72
CSTF2-202ENST00000413437 ABCC6O95255 1503 aa10.54□□□□□ -0.72
CSTF2-202ENST00000413437 NBPF6Q5VWK0 638 aa10.54□□□□□ -0.72
CSTF2-202ENST00000413437 BARGINQ6ZT62 677 aa10.54□□□□□ -0.72
CSTF2-202ENST00000413437 NBPF4Q96M43 638 aa10.54□□□□□ -0.72
CSTF2-202ENST00000413437 CARD10Q9BWT7 1032 aa10.54□□□□□ -0.72
CSTF2-202ENST00000413437 INSRP06213 1382 aa10.53□□□□□ -0.72
CSTF2-202ENST00000413437 BLMP54132 1417 aaPredicted RBP10.53□□□□□ -0.72
CSTF2-202ENST00000413437 SOCS7O14512 581 aa10.53□□□□□ -0.72
CSTF2-202ENST00000413437 RTL1A6NKG5 1358 aa10.52□□□□□ -0.72
CSTF2-202ENST00000413437 FLT4P35916 1363 aa10.52□□□□□ -0.72
CSTF2-202ENST00000413437 ZNF316A6NFI3 1004 aaPredicted RBP10.52□□□□□ -0.73
CSTF2-202ENST00000413437 EIF4A2Q14240 407 aaKnown RBP10.52□□□□□ -0.73
CSTF2-202ENST00000413437 KRT27Q7Z3Y8 459 aa10.52□□□□□ -0.73
CSTF2-202ENST00000413437 FAM208AQ9UK61 1670 aaKnown RBP10.52□□□□□ -0.73
CSTF2-202ENST00000413437 DISP2A7MBM2 1401 aa10.51□□□□□ -0.73
CSTF2-202ENST00000413437 MTHFSP49914 203 aa10.51□□□□□ -0.73
CSTF2-202ENST00000413437 THRAP3Q9Y2W1 955 aaKnown RBP10.51□□□□□ -0.73
CSTF2-202ENST00000413437 WNK3Q9BYP7 1800 aa10.51□□□□□ -0.73
CSTF2-202ENST00000413437 NPC1L1Q9UHC9 1359 aa10.51□□□□□ -0.73
CSTF2-202ENST00000413437 SMG6Q86US8 1419 aaKnown RBP10.5□□□□□ -0.73
CSTF2-202ENST00000413437 UPF1Q92900 1129 aaKnown RBP eCLIP10.5□□□□□ -0.73
CSTF2-202ENST00000413437 EYA1Q99502 592 aa10.5□□□□□ -0.73
CSTF2-202ENST00000413437 LRRC37A3O60309 1634 aa10.49□□□□□ -0.73
CSTF2-202ENST00000413437 PPP2R1AP30153 589 aa10.49□□□□□ -0.73
CSTF2-202ENST00000413437 MARCH10Q8NA82 808 aaPredicted RBP10.49□□□□□ -0.73
CSTF2-202ENST00000413437 PARP4Q9UKK3 1724 aaKnown RBP10.49□□□□□ -0.73
CSTF2-202ENST00000413437 KIF24Q5T7B8 1368 aa10.49□□□□□ -0.73
CSTF2-202ENST00000413437 MEGF6O75095 1541 aa10.48□□□□□ -0.73
CSTF2-202ENST00000413437 IL2RBP14784 551 aa10.48□□□□□ -0.73
CSTF2-202ENST00000413437 IL13P35225 146 aa10.48□□□□□ -0.73
CSTF2-202ENST00000413437 DDB1Q16531 1140 aa10.48□□□□□ -0.73
CSTF2-202ENST00000413437 PTF1AQ7RTS3 328 aa10.48□□□□□ -0.73
CSTF2-202ENST00000413437 ADRA2BP18089 450 aa10.47□□□□□ -0.73
CSTF2-202ENST00000413437 PDE3BQ13370 1112 aa10.47□□□□□ -0.73
CSTF2-202ENST00000413437 AEBP1Q8IUX7 1158 aa10.47□□□□□ -0.73
CSTF2-202ENST00000413437 EXOC5O00471 708 aa10.46□□□□□ -0.73
CSTF2-202ENST00000413437 COL3A1P02461 1466 aaPredicted RBP10.46□□□□□ -0.74
CSTF2-202ENST00000413437 NCAPD2Q15021 1401 aa10.45□□□□□ -0.74
CSTF2-202ENST00000413437 PARD3Q8TEW0 1356 aa10.45□□□□□ -0.74
CSTF2-202ENST00000413437 DDX54Q8TDD1 881 aaKnown RBP10.45□□□□□ -0.74
CSTF2-202ENST00000413437 RGPD1P0DJD0 1748 aa10.44□□□□□ -0.74
CSTF2-202ENST00000413437 SHANK3Q9BYB0 1731 aa10.44□□□□□ -0.74
CSTF2-202ENST00000413437 IGSF1Q8N6C5 1336 aa10.44□□□□□ -0.74
CSTF2-202ENST00000413437 TRIM37O94972 964 aa10.44□□□□□ -0.74
CSTF2-202ENST00000413437 CDCA7Q9BWT1 371 aaPredicted RBP10.44□□□□□ -0.74
CSTF2-202ENST00000413437 OVOS2A0A0G2JMS6 1433 aa10.43□□□□□ -0.74
CSTF2-202ENST00000413437 TNS2Q63HR2 1409 aa10.43□□□□□ -0.74
CSTF2-202ENST00000413437 KCNQ2O43526 872 aa10.43□□□□□ -0.74
CSTF2-202ENST00000413437 DIAPH1O60610 1272 aaKnown RBP10.43□□□□□ -0.74
CSTF2-202ENST00000413437 HMOX1P09601 288 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms