RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 IP6K1Q92551 441 aa34.84■■■■□ 3.17
RHBDD3-203ENST00000413137 CFAP53Q96M91 514 aa34.84■■■■□ 3.17
RHBDD3-203ENST00000413137 PNISRQ8TF01 805 aaKnown RBP34.83■■■■□ 3.17
RHBDD3-203ENST00000413137 PRDM11Q9NQV5 511 aa34.82■■■■□ 3.16
RHBDD3-203ENST00000413137 KIF24Q5T7B8 1368 aa34.82■■■■□ 3.16
RHBDD3-203ENST00000413137 FAM83GA6ND36 823 aa34.81■■■■□ 3.16
RHBDD3-203ENST00000413137 RTL1A6NKG5 1358 aa34.81■■■■□ 3.16
RHBDD3-203ENST00000413137 ADAMTS2O95450 1211 aa34.8■■■■□ 3.16
RHBDD3-203ENST00000413137 IL13P35225 146 aa34.79■■■■□ 3.16
RHBDD3-203ENST00000413137 EIF4A2Q14240 407 aaKnown RBP34.79■■■■□ 3.16
RHBDD3-203ENST00000413137 DIAPH1O60610 1272 aaKnown RBP34.78■■■■□ 3.16
RHBDD3-203ENST00000413137 COL18A1P39060 1754 aa34.77■■■■□ 3.16
RHBDD3-203ENST00000413137 LTV1Q96GA3 475 aaPredicted RBP34.76■■■■□ 3.16
RHBDD3-203ENST00000413137 FAM9BQ8IZU0 186 aa34.75■■■■□ 3.15
RHBDD3-203ENST00000413137 SPATA31A6Q5VVP1 1343 aa34.74■■■■□ 3.15
RHBDD3-203ENST00000413137 LRP6O75581 1613 aa34.72■■■■□ 3.15
RHBDD3-203ENST00000413137 CAMTA1Q9Y6Y1 1673 aa34.7■■■■□ 3.15
RHBDD3-203ENST00000413137 ADAMTS8Q9UP79 889 aa34.7■■■■□ 3.15
RHBDD3-203ENST00000413137 BLMP54132 1417 aaPredicted RBP34.7■■■■□ 3.15
RHBDD3-203ENST00000413137 U2SURPO15042 1029 aaKnown RBP34.7■■■■□ 3.14
RHBDD3-203ENST00000413137 ANKRD24Q8TF21 1146 aa34.7■■■■□ 3.14
RHBDD3-203ENST00000413137 LMO7Q8WWI1 1683 aa34.69■■■■□ 3.14
RHBDD3-203ENST00000413137 RGPD5Q99666 1765 aa34.69■■■■□ 3.14
RHBDD3-203ENST00000413137 WDR43Q15061 677 aaKnown RBP eCLIP34.67■■■■□ 3.14
RHBDD3-203ENST00000413137 ABCC6O95255 1503 aa34.67■■■■□ 3.14
RHBDD3-203ENST00000413137 NUDCQ9Y266 331 aa34.66■■■■□ 3.14
RHBDD3-203ENST00000413137 U2AF1L5P0DN76 240 aaPredicted RBP34.66■■■■□ 3.14
RHBDD3-203ENST00000413137 U2AF1Q01081 240 aaKnown RBP eCLIP34.66■■■■□ 3.14
RHBDD3-203ENST00000413137 ERBB3P21860 1342 aa34.65■■■■□ 3.14
RHBDD3-203ENST00000413137 EYA1Q99502 592 aa34.65■■■■□ 3.14
RHBDD3-203ENST00000413137 BTG4Q9NY30 223 aa34.65■■■■□ 3.14
RHBDD3-203ENST00000413137 COL14A1Q05707 1796 aaKnown RBP34.62■■■■□ 3.13
RHBDD3-203ENST00000413137 NBPF6Q5VWK0 638 aa34.62■■■■□ 3.13
RHBDD3-203ENST00000413137 NBPF4Q96M43 638 aa34.62■■■■□ 3.13
RHBDD3-203ENST00000413137 COL5A2P05997 1499 aaPredicted RBP34.61■■■■□ 3.13
RHBDD3-203ENST00000413137 C8orf37Q96NL8 207 aa34.61■■■■□ 3.13
RHBDD3-203ENST00000413137 HMOX1P09601 288 aa34.6■■■■□ 3.13
RHBDD3-203ENST00000413137 AEBP1Q8IUX7 1158 aa34.6■■■■□ 3.13
RHBDD3-203ENST00000413137 STRN4Q9NRL3 753 aa34.6■■■■□ 3.13
RHBDD3-203ENST00000413137 USHBP1Q8N6Y0 703 aa34.59■■■■□ 3.13
RHBDD3-203ENST00000413137 RGPD1P0DJD0 1748 aa34.58■■■■□ 3.13
RHBDD3-203ENST00000413137 IGSF1Q8N6C5 1336 aa34.58■■■■□ 3.13
RHBDD3-203ENST00000413137 CSB-PGBD3P0DP91 1061 aa34.57■■■■□ 3.12
RHBDD3-203ENST00000413137 SULT6B1Q6IMI4 303 aa34.57■■■■□ 3.12
RHBDD3-203ENST00000413137 CCDC146Q8IYE0 955 aa34.56■■■■□ 3.12
RHBDD3-203ENST00000413137 NGLY1Q96IV0 654 aa34.56■■■■□ 3.12
RHBDD3-203ENST00000413137 EVA1CP58658 441 aa34.55■■■■□ 3.12
RHBDD3-203ENST00000413137 LARP1Q6PKG0 1096 aaKnown RBP34.55■■■■□ 3.12
RHBDD3-203ENST00000413137 RGPD2P0DJD1 1756 aa34.55■■■■□ 3.12
RHBDD3-203ENST00000413137 PLCH1Q4KWH8 1693 aa34.54■■■■□ 3.12
RHBDD3-203ENST00000413137 MEX3CQ5U5Q3 659 aaKnown RBP34.54■■■■□ 3.12
RHBDD3-203ENST00000413137 NLRP2Q9NX02 1062 aa34.54■■■■□ 3.12
RHBDD3-203ENST00000413137 WDR17Q8IZU2 1322 aa34.54■■■■□ 3.12
RHBDD3-203ENST00000413137 SLIT2O94813 1529 aa34.54■■■■□ 3.12
RHBDD3-203ENST00000413137 SENP3-EIF4A1A0A087X0R7 540 aa34.53■■■■□ 3.12
RHBDD3-203ENST00000413137 RSPH6AQ9H0K4 717 aa34.53■■■■□ 3.12
RHBDD3-203ENST00000413137 FCHSD2O94868 740 aa34.49■■■■□ 3.11
RHBDD3-203ENST00000413137 TOM1L2Q6ZVM7 507 aa34.49■■■■□ 3.11
RHBDD3-203ENST00000413137 ILDR1Q86SU0 546 aaPredicted RBP34.49■■■■□ 3.11
RHBDD3-203ENST00000413137 FNBP4Q8N3X1 1017 aaPredicted RBP34.49■■■■□ 3.11
RHBDD3-203ENST00000413137 PLEKHF1Q96S99 279 aa34.49■■■■□ 3.11
RHBDD3-203ENST00000413137 PRKAR2BP31323 418 aa34.49■■■■□ 3.11
RHBDD3-203ENST00000413137 KDRP35968 1356 aa34.48■■■■□ 3.11
RHBDD3-203ENST00000413137 BCL9LQ86UU0 1499 aa34.47■■■■□ 3.11
RHBDD3-203ENST00000413137 NCAPD2Q15021 1401 aa34.46■■■■□ 3.11
RHBDD3-203ENST00000413137 NRAPQ86VF7 1730 aa34.46■■■■□ 3.11
RHBDD3-203ENST00000413137 UNC5CLQ8IV45 518 aa34.45■■■■□ 3.1
RHBDD3-203ENST00000413137 PHACTR3Q96KR7 559 aa34.45■■■■□ 3.1
RHBDD3-203ENST00000413137 YTHDC1Q96MU7 727 aaKnown RBP34.45■■■■□ 3.1
RHBDD3-203ENST00000413137 CARD10Q9BWT7 1032 aa34.43■■■■□ 3.1
RHBDD3-203ENST00000413137 AFF2P51816 1311 aa34.42■■■■□ 3.1
RHBDD3-203ENST00000413137 NWD2Q9ULI1 1742 aa34.42■■■■□ 3.1
RHBDD3-203ENST00000413137 RUNDC1Q96C34 613 aa34.42■■■■□ 3.1
RHBDD3-203ENST00000413137 USP35Q9P2H5 1018 aa34.42■■■■□ 3.1
RHBDD3-203ENST00000413137 USP21Q9UK80 565 aa34.42■■■■□ 3.1
RHBDD3-203ENST00000413137 CRB1P82279 1406 aa34.42■■■■□ 3.1
RHBDD3-203ENST00000413137 FAM208AQ9UK61 1670 aaKnown RBP34.42■■■■□ 3.1
RHBDD3-203ENST00000413137 APAF1O14727 1248 aa34.38■■■■□ 3.09
RHBDD3-203ENST00000413137 TCP11L2Q8N4U5 519 aa34.36■■■■□ 3.09
RHBDD3-203ENST00000413137 PNNQ9H307 717 aaKnown RBP34.36■■■■□ 3.09
RHBDD3-203ENST00000413137 HNRNPUQ00839 825 aaKnown RBP eCLIP34.34■■■■□ 3.09
RHBDD3-203ENST00000413137 RRP7AQ9Y3A4 280 aaKnown RBP34.34■■■■□ 3.09
RHBDD3-203ENST00000413137 SPATA31A1Q5TZJ5 1347 aa34.34■■■■□ 3.09
RHBDD3-203ENST00000413137 SPATA31A5Q5VU36 1347 aa34.34■■■■□ 3.09
RHBDD3-203ENST00000413137 SPATA31A7Q8IWB4 1347 aa34.34■■■■□ 3.09
RHBDD3-203ENST00000413137 MEGF6O75095 1541 aa34.33■■■■□ 3.09
RHBDD3-203ENST00000413137 VPS72Q15906 364 aa34.33■■■■□ 3.09
RHBDD3-203ENST00000413137 MAPK8IP3Q9UPT6 1336 aa34.33■■■■□ 3.09
RHBDD3-203ENST00000413137 CCDC9Q9Y3X0 531 aaKnown RBP34.32■■■■□ 3.09
RHBDD3-203ENST00000413137 SALL2Q9Y467 1007 aaPredicted RBP34.32■■■■□ 3.08
RHBDD3-203ENST00000413137 RAPGEF4Q8WZA2 1011 aa34.3■■■■□ 3.08
RHBDD3-203ENST00000413137 MTHFSDQ2M296 383 aaKnown RBP34.29■■■■□ 3.08
RHBDD3-203ENST00000413137 TMPOP42166 694 aaKnown RBP34.28■■■■□ 3.08
RHBDD3-203ENST00000413137 NEUROD2Q15784 382 aa34.28■■■■□ 3.08
RHBDD3-203ENST00000413137 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.27■■■■□ 3.08
RHBDD3-203ENST00000413137 NEFMP07197 916 aa34.27■■■■□ 3.08
RHBDD3-203ENST00000413137 TATP17735 454 aaPredicted RBP34.27■■■■□ 3.08
RHBDD3-203ENST00000413137 IL2RBP14784 551 aa34.26■■■■□ 3.07
RHBDD3-203ENST00000413137 NFE2L2Q16236 605 aa34.25■■■■□ 3.07
RHBDD3-203ENST00000413137 ATRNO75882 1429 aa34.24■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms