RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 SLC34A2O95436 690 aa13.89□□□□□ -0.19
SOX9-AS1-201ENST00000412640 CFAP70Q5T0N1 1121 aa13.89□□□□□ -0.19
SOX9-AS1-201ENST00000412640 LRRC37A3O60309 1634 aa13.89□□□□□ -0.19
SOX9-AS1-201ENST00000412640 MINK1Q8N4C8 1332 aaPredicted RBP13.89□□□□□ -0.19
SOX9-AS1-201ENST00000412640 LMO7Q8WWI1 1683 aa13.88□□□□□ -0.19
SOX9-AS1-201ENST00000412640 APLP1P51693 650 aa13.88□□□□□ -0.19
SOX9-AS1-201ENST00000412640 C14orf93Q9H972 538 aaKnown RBP13.88□□□□□ -0.19
SOX9-AS1-201ENST00000412640 RAB3GAP2Q9H2M9 1393 aa13.87□□□□□ -0.19
SOX9-AS1-201ENST00000412640 POLD1P28340 1107 aa13.87□□□□□ -0.19
SOX9-AS1-201ENST00000412640 ZNF827Q17R98 1081 aa13.87□□□□□ -0.19
SOX9-AS1-201ENST00000412640 CRB1P82279 1406 aa13.87□□□□□ -0.19
SOX9-AS1-201ENST00000412640 COL5A2P05997 1499 aaPredicted RBP13.87□□□□□ -0.19
SOX9-AS1-201ENST00000412640 ZBTB7CA1YPR0 619 aa13.86□□□□□ -0.19
SOX9-AS1-201ENST00000412640 SLC4A1APQ9BWU0 796 aaKnown RBP13.86□□□□□ -0.19
SOX9-AS1-201ENST00000412640 TULP4Q9NRJ4 1543 aa13.85□□□□□ -0.19
SOX9-AS1-201ENST00000412640 CPDO75976 1380 aa13.84□□□□□ -0.19
SOX9-AS1-201ENST00000412640 AATKQ6ZMQ8 1374 aa13.84□□□□□ -0.19
SOX9-AS1-201ENST00000412640 SPATA31E1Q6ZUB1 1445 aa13.84□□□□□ -0.19
SOX9-AS1-201ENST00000412640 WASLO00401 505 aaPredicted RBP13.84□□□□□ -0.19
SOX9-AS1-201ENST00000412640 KIF3CO14782 793 aa13.84□□□□□ -0.19
SOX9-AS1-201ENST00000412640 ADCY9O60503 1353 aa13.83□□□□□ -0.19
SOX9-AS1-201ENST00000412640 TOM1L2Q6ZVM7 507 aa13.83□□□□□ -0.2
SOX9-AS1-201ENST00000412640 EIF3AQ14152 1382 aaKnown RBP13.83□□□□□ -0.2
SOX9-AS1-201ENST00000412640 BCL9O00512 1426 aa13.82□□□□□ -0.2
SOX9-AS1-201ENST00000412640 ABTB2Q8N961 1025 aa13.82□□□□□ -0.2
SOX9-AS1-201ENST00000412640 SLC16A10Q8TF71 515 aa13.82□□□□□ -0.2
SOX9-AS1-201ENST00000412640 TRAK1Q9UPV9 953 aa13.82□□□□□ -0.2
SOX9-AS1-201ENST00000412640 PAPPAQ13219 1627 aa13.82□□□□□ -0.2
SOX9-AS1-201ENST00000412640 TOPAZ1Q8N9V7 1692 aa13.82□□□□□ -0.2
SOX9-AS1-201ENST00000412640 GCP02774 474 aa13.81□□□□□ -0.2
SOX9-AS1-201ENST00000412640 ACSBG1Q96GR2 724 aa13.81□□□□□ -0.2
SOX9-AS1-201ENST00000412640 LRRC4BQ9NT99 713 aa13.81□□□□□ -0.2
SOX9-AS1-201ENST00000412640 AKAP12Q02952 1782 aa13.81□□□□□ -0.2
SOX9-AS1-201ENST00000412640 NUDT16Q96DE0 195 aaKnown RBP13.8□□□□□ -0.2
SOX9-AS1-201ENST00000412640 HTRA3P83110 453 aa13.79□□□□□ -0.2
SOX9-AS1-201ENST00000412640 USP19O94966 1318 aa13.79□□□□□ -0.2
SOX9-AS1-201ENST00000412640 AKT1S1Q96B36 256 aa13.78□□□□□ -0.2
SOX9-AS1-201ENST00000412640 PNPLA7Q6ZV29 1317 aa13.78□□□□□ -0.2
SOX9-AS1-201ENST00000412640 EXOC5O00471 708 aa13.77□□□□□ -0.21
SOX9-AS1-201ENST00000412640 ACEP12821 1306 aa13.77□□□□□ -0.21
SOX9-AS1-201ENST00000412640 COL24A1Q17RW2 1714 aa13.76□□□□□ -0.21
SOX9-AS1-201ENST00000412640 NLRP13Q86W25 1043 aa13.76□□□□□ -0.21
SOX9-AS1-201ENST00000412640 JMYQ8N9B5 988 aa13.76□□□□□ -0.21
SOX9-AS1-201ENST00000412640 KLRG1Q96E93 195 aa13.76□□□□□ -0.21
SOX9-AS1-201ENST00000412640 CDCA7Q9BWT1 371 aaPredicted RBP13.76□□□□□ -0.21
SOX9-AS1-201ENST00000412640 WNK3Q9BYP7 1800 aa13.75□□□□□ -0.21
SOX9-AS1-201ENST00000412640 WDR17Q8IZU2 1322 aa13.74□□□□□ -0.21
SOX9-AS1-201ENST00000412640 TOMM70O94826 608 aa13.74□□□□□ -0.21
SOX9-AS1-201ENST00000412640 TFCP2L1Q9NZI6 479 aa13.74□□□□□ -0.21
SOX9-AS1-201ENST00000412640 WWC3Q9ULE0 1092 aa13.74□□□□□ -0.21
SOX9-AS1-201ENST00000412640 AXIN2Q9Y2T1 843 aa13.74□□□□□ -0.21
SOX9-AS1-201ENST00000412640 ITSN1Q15811 1721 aa13.73□□□□□ -0.21
SOX9-AS1-201ENST00000412640 NHSQ6T4R5 1651 aa13.73□□□□□ -0.21
SOX9-AS1-201ENST00000412640 KCNQ4P56696 695 aa13.73□□□□□ -0.21
SOX9-AS1-201ENST00000412640 USP6P35125 1406 aa13.73□□□□□ -0.21
SOX9-AS1-201ENST00000412640 POLR3AO14802 1390 aaPredicted RBP13.72□□□□□ -0.21
SOX9-AS1-201ENST00000412640 BRD4O60885 1362 aaPredicted RBP13.72□□□□□ -0.21
SOX9-AS1-201ENST00000412640 MSH5O43196 834 aa13.72□□□□□ -0.21
SOX9-AS1-201ENST00000412640 WDR90Q96KV7 1748 aa13.72□□□□□ -0.21
SOX9-AS1-201ENST00000412640 MSL1Q68DK7 614 aa13.71□□□□□ -0.21
SOX9-AS1-201ENST00000412640 BTAF1O14981 1849 aa13.7□□□□□ -0.22
SOX9-AS1-201ENST00000412640 CSB-PGBD3P0DP91 1061 aa13.7□□□□□ -0.22
SOX9-AS1-201ENST00000412640 CARD10Q9BWT7 1032 aa13.7□□□□□ -0.22
SOX9-AS1-201ENST00000412640 CDK19Q9BWU1 502 aa13.7□□□□□ -0.22
SOX9-AS1-201ENST00000412640 PCDH10Q9P2E7 1040 aa13.7□□□□□ -0.22
SOX9-AS1-201ENST00000412640 QSER1Q2KHR3 1735 aa13.7□□□□□ -0.22
SOX9-AS1-201ENST00000412640 ADGRB1O14514 1584 aa13.69□□□□□ -0.22
SOX9-AS1-201ENST00000412640 TUBGCP6Q96RT7 1819 aa13.69□□□□□ -0.22
SOX9-AS1-201ENST00000412640 PLEKHG3A1L390 1219 aa13.68□□□□□ -0.22
SOX9-AS1-201ENST00000412640 NLRP6P59044 892 aa13.68□□□□□ -0.22
SOX9-AS1-201ENST00000412640 CD2APQ9Y5K6 639 aa13.68□□□□□ -0.22
SOX9-AS1-201ENST00000412640 CCDC61Q9Y6R9 512 aa13.68□□□□□ -0.22
SOX9-AS1-201ENST00000412640 TNS2Q63HR2 1409 aa13.67□□□□□ -0.22
SOX9-AS1-201ENST00000412640 PCNTO95613 3336 aa13.67□□□□□ -0.22
SOX9-AS1-201ENST00000412640 SLC27A3Q5K4L6 730 aa13.67□□□□□ -0.22
SOX9-AS1-201ENST00000412640 COL23A1Q86Y22 540 aaPredicted RBP13.67□□□□□ -0.22
SOX9-AS1-201ENST00000412640 NMRK2Q9NPI5 230 aa13.67□□□□□ -0.22
SOX9-AS1-201ENST00000412640 COL18A1P39060 1754 aa13.67□□□□□ -0.22
SOX9-AS1-201ENST00000412640 ARHGEF28Q8N1W1 1705 aaKnown RBP13.67□□□□□ -0.22
SOX9-AS1-201ENST00000412640 HSPA1AP0DMV8 641 aaKnown RBP13.64□□□□□ -0.23
SOX9-AS1-201ENST00000412640 HSPA1BP0DMV9 641 aaKnown RBP13.64□□□□□ -0.23
SOX9-AS1-201ENST00000412640 IGSF1Q8N6C5 1336 aa13.64□□□□□ -0.23
SOX9-AS1-201ENST00000412640 RGPD5Q99666 1765 aa13.63□□□□□ -0.23
SOX9-AS1-201ENST00000412640 SOX12O15370 315 aa13.63□□□□□ -0.23
SOX9-AS1-201ENST00000412640 RBM46Q8TBY0 533 aaKnown RBP13.63□□□□□ -0.23
SOX9-AS1-201ENST00000412640 TIMELESSQ9UNS1 1208 aa13.63□□□□□ -0.23
SOX9-AS1-201ENST00000412640 KAT6BQ8WYB5 2073 aa13.63□□□□□ -0.23
SOX9-AS1-201ENST00000412640 CCDC7Q96M83 1385 aa13.62□□□□□ -0.23
SOX9-AS1-201ENST00000412640 ARHGEF25Q86VW2 580 aa13.62□□□□□ -0.23
SOX9-AS1-201ENST00000412640 MPHOSPH9Q99550 1183 aa13.62□□□□□ -0.23
SOX9-AS1-201ENST00000412640 SLIT3O75094 1523 aa13.62□□□□□ -0.23
SOX9-AS1-201ENST00000412640 PPIP5K1Q6PFW1 1433 aa13.62□□□□□ -0.23
SOX9-AS1-201ENST00000412640 C16orf71Q8IYS4 520 aaPredicted RBP13.61□□□□□ -0.23
SOX9-AS1-201ENST00000412640 CPSF1Q10570 1443 aaKnown RBP13.61□□□□□ -0.23
SOX9-AS1-201ENST00000412640 ABCC6O95255 1503 aa13.6□□□□□ -0.23
SOX9-AS1-201ENST00000412640 KDM2AQ9Y2K7 1162 aa13.6□□□□□ -0.23
SOX9-AS1-201ENST00000412640 SYTL4Q96C24 671 aaPredicted RBP13.59□□□□□ -0.23
SOX9-AS1-201ENST00000412640 TRPM1Q7Z4N2 1603 aa13.59□□□□□ -0.23
SOX9-AS1-201ENST00000412640 FSTL1Q12841 308 aa13.58□□□□□ -0.24
SOX9-AS1-201ENST00000412640 IL2RBP14784 551 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms