RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 THSD7AQ9UPZ6 1657 aa18.19■□□□□ 0.5
HDAC8-210ENST00000412342 SPATA31A5Q5VU36 1347 aa18.19■□□□□ 0.5
HDAC8-210ENST00000412342 SPATA31A7Q8IWB4 1347 aa18.19■□□□□ 0.5
HDAC8-210ENST00000412342 BRWD3Q6RI45 1802 aa18.18■□□□□ 0.5
HDAC8-210ENST00000412342 CGNL1Q0VF96 1302 aa18.18■□□□□ 0.5
HDAC8-210ENST00000412342 PEAK1Q9H792 1746 aa18.18■□□□□ 0.5
HDAC8-210ENST00000412342 WNK3Q9BYP7 1800 aa18.17■□□□□ 0.5
HDAC8-210ENST00000412342 SPATA31A1Q5TZJ5 1347 aa18.17■□□□□ 0.5
HDAC8-210ENST00000412342 ZBTB7CA1YPR0 619 aa18.16■□□□□ 0.5
HDAC8-210ENST00000412342 ONECUT3O60422 494 aaPredicted RBP18.16■□□□□ 0.5
HDAC8-210ENST00000412342 FBLN1P23142 703 aa18.16■□□□□ 0.5
HDAC8-210ENST00000412342 ZEB1P37275 1124 aaPredicted RBP18.16■□□□□ 0.5
HDAC8-210ENST00000412342 LARP1Q6PKG0 1096 aaKnown RBP18.16■□□□□ 0.5
HDAC8-210ENST00000412342 STRN4Q9NRL3 753 aa18.16■□□□□ 0.5
HDAC8-210ENST00000412342 MAP3K19Q56UN5 1328 aa18.15■□□□□ 0.5
HDAC8-210ENST00000412342 NSD2O96028 1365 aa18.15■□□□□ 0.5
HDAC8-210ENST00000412342 CRB1P82279 1406 aa18.15■□□□□ 0.5
HDAC8-210ENST00000412342 PER1O15534 1290 aaPredicted RBP18.14■□□□□ 0.49
HDAC8-210ENST00000412342 BLMP54132 1417 aaPredicted RBP18.14■□□□□ 0.49
HDAC8-210ENST00000412342 FAM208AQ9UK61 1670 aaKnown RBP18.13■□□□□ 0.49
HDAC8-210ENST00000412342 SOCS7O14512 581 aa18.13■□□□□ 0.49
HDAC8-210ENST00000412342 CCDC9Q9Y3X0 531 aaKnown RBP18.13■□□□□ 0.49
HDAC8-210ENST00000412342 MAP2P11137 1827 aaKnown RBP18.13■□□□□ 0.49
HDAC8-210ENST00000412342 WDR17Q8IZU2 1322 aa18.13■□□□□ 0.49
HDAC8-210ENST00000412342 RTL1A6NKG5 1358 aa18.13■□□□□ 0.49
HDAC8-210ENST00000412342 EVA1CP58658 441 aa18.12■□□□□ 0.49
HDAC8-210ENST00000412342 AMER1Q5JTC6 1135 aaPredicted RBP18.12■□□□□ 0.49
HDAC8-210ENST00000412342 IP6K1Q92551 441 aa18.12■□□□□ 0.49
HDAC8-210ENST00000412342 ERBB3P21860 1342 aa18.12■□□□□ 0.49
HDAC8-210ENST00000412342 PARP4Q9UKK3 1724 aaKnown RBP18.12■□□□□ 0.49
HDAC8-210ENST00000412342 RRS1Q15050 365 aaKnown RBP18.11■□□□□ 0.49
HDAC8-210ENST00000412342 KIF24Q5T7B8 1368 aa18.1■□□□□ 0.49
HDAC8-210ENST00000412342 HOXC9P31274 260 aa18.1■□□□□ 0.49
HDAC8-210ENST00000412342 FAM98CQ17RN3 349 aaKnown RBP18.1■□□□□ 0.49
HDAC8-210ENST00000412342 RGPD2P0DJD1 1756 aa18.09■□□□□ 0.49
HDAC8-210ENST00000412342 BARGINQ6ZT62 677 aa18.09■□□□□ 0.49
HDAC8-210ENST00000412342 SEPT12Q8IYM1 358 aa18.09■□□□□ 0.49
HDAC8-210ENST00000412342 KNSTRNQ9Y448 316 aa18.09■□□□□ 0.49
HDAC8-210ENST00000412342 LRRC37A3O60309 1634 aa18.08■□□□□ 0.48
HDAC8-210ENST00000412342 DISP2A7MBM2 1401 aa18.07■□□□□ 0.48
HDAC8-210ENST00000412342 SMG6Q86US8 1419 aaKnown RBP18.07■□□□□ 0.48
HDAC8-210ENST00000412342 NPC1L1Q9UHC9 1359 aa18.07■□□□□ 0.48
HDAC8-210ENST00000412342 TCP11L2Q8N4U5 519 aa18.07■□□□□ 0.48
HDAC8-210ENST00000412342 USP35Q9P2H5 1018 aa18.07■□□□□ 0.48
HDAC8-210ENST00000412342 THRAP3Q9Y2W1 955 aaKnown RBP18.07■□□□□ 0.48
HDAC8-210ENST00000412342 FLT4P35916 1363 aa18.06■□□□□ 0.48
HDAC8-210ENST00000412342 TOM1L2Q6ZVM7 507 aa18.06■□□□□ 0.48
HDAC8-210ENST00000412342 ANKRD24Q8TF21 1146 aa18.06■□□□□ 0.48
HDAC8-210ENST00000412342 CARD10Q9BWT7 1032 aa18.06■□□□□ 0.48
HDAC8-210ENST00000412342 EMILIN1Q9Y6C2 1016 aa18.06■□□□□ 0.48
HDAC8-210ENST00000412342 INSRP06213 1382 aa18.05■□□□□ 0.48
HDAC8-210ENST00000412342 AMPHP49418 695 aa18.05■□□□□ 0.48
HDAC8-210ENST00000412342 POLKQ9UBT6 870 aa18.05■□□□□ 0.48
HDAC8-210ENST00000412342 EP400Q96L91 3159 aa18.03■□□□□ 0.48
HDAC8-210ENST00000412342 CSB-PGBD3P0DP91 1061 aa18.03■□□□□ 0.48
HDAC8-210ENST00000412342 HSP90AB2PQ58FF8 381 aa18.03■□□□□ 0.48
HDAC8-210ENST00000412342 TNNT2P45379 298 aaPredicted RBP18.01■□□□□ 0.47
HDAC8-210ENST00000412342 MORC1Q86VD1 984 aa18.01■□□□□ 0.47
HDAC8-210ENST00000412342 NCAPD2Q15021 1401 aa18■□□□□ 0.47
HDAC8-210ENST00000412342 KRT27Q7Z3Y8 459 aa18■□□□□ 0.47
HDAC8-210ENST00000412342 LTV1Q96GA3 475 aaPredicted RBP18■□□□□ 0.47
HDAC8-210ENST00000412342 A0A0G2JS52 829 aa17.99■□□□□ 0.47
HDAC8-210ENST00000412342 MYT1Q01538 1121 aa17.99■□□□□ 0.47
HDAC8-210ENST00000412342 CC2D1BQ5T0F9 858 aaKnown RBP17.99■□□□□ 0.47
HDAC8-210ENST00000412342 UPF1Q92900 1129 aaKnown RBP eCLIP17.99■□□□□ 0.47
HDAC8-210ENST00000412342 NLRP2Q9NX02 1062 aa17.99■□□□□ 0.47
HDAC8-210ENST00000412342 SHANK3Q9BYB0 1731 aa17.98■□□□□ 0.47
HDAC8-210ENST00000412342 NBPF6Q5VWK0 638 aa17.97■□□□□ 0.47
HDAC8-210ENST00000412342 NBPF4Q96M43 638 aa17.97■□□□□ 0.47
HDAC8-210ENST00000412342 CDCA7Q9BWT1 371 aaPredicted RBP17.97■□□□□ 0.47
HDAC8-210ENST00000412342 TNS2Q63HR2 1409 aa17.97■□□□□ 0.47
HDAC8-210ENST00000412342 RGPD1P0DJD0 1748 aa17.96■□□□□ 0.47
HDAC8-210ENST00000412342 PPM1GO15355 546 aaPredicted RBP17.96■□□□□ 0.47
HDAC8-210ENST00000412342 MEGF6O75095 1541 aa17.95■□□□□ 0.46
HDAC8-210ENST00000412342 TNS1Q9HBL0 1735 aaKnown RBP17.95■□□□□ 0.46
HDAC8-210ENST00000412342 FAM182BQ5T319 152 aa17.94■□□□□ 0.46
HDAC8-210ENST00000412342 SBF2Q86WG5 1849 aa17.93■□□□□ 0.46
HDAC8-210ENST00000412342 IL2RBP14784 551 aa17.93■□□□□ 0.46
HDAC8-210ENST00000412342 EIF4A2Q14240 407 aaKnown RBP17.93■□□□□ 0.46
HDAC8-210ENST00000412342 DDB1Q16531 1140 aa17.93■□□□□ 0.46
HDAC8-210ENST00000412342 COL3A1P02461 1466 aaPredicted RBP17.93■□□□□ 0.46
HDAC8-210ENST00000412342 USHBP1Q8N6Y0 703 aa17.92■□□□□ 0.46
HDAC8-210ENST00000412342 PKD1L3Q7Z443 1732 aa17.92■□□□□ 0.46
HDAC8-210ENST00000412342 OVOS2A0A0G2JMS6 1433 aa17.91■□□□□ 0.46
HDAC8-210ENST00000412342 PDE3BQ13370 1112 aa17.91■□□□□ 0.46
HDAC8-210ENST00000412342 BCL9O00512 1426 aa17.9■□□□□ 0.46
HDAC8-210ENST00000412342 MTHFSP49914 203 aa17.9■□□□□ 0.46
HDAC8-210ENST00000412342 DDX10Q13206 875 aaKnown RBP17.9■□□□□ 0.46
HDAC8-210ENST00000412342 MARCH10Q8NA82 808 aaPredicted RBP17.9■□□□□ 0.46
HDAC8-210ENST00000412342 EYA1Q99502 592 aa17.9■□□□□ 0.46
HDAC8-210ENST00000412342 PARD3Q8TEW0 1356 aa17.9■□□□□ 0.46
HDAC8-210ENST00000412342 IGSF1Q8N6C5 1336 aa17.89■□□□□ 0.45
HDAC8-210ENST00000412342 CNGB1Q14028 1251 aaPredicted RBP17.88■□□□□ 0.45
HDAC8-210ENST00000412342 EXOC5O00471 708 aa17.87■□□□□ 0.45
HDAC8-210ENST00000412342 IL13P35225 146 aa17.87■□□□□ 0.45
HDAC8-210ENST00000412342 FAM196AQ6ZSG2 479 aa17.87■□□□□ 0.45
HDAC8-210ENST00000412342 CCDC125Q86Z20 511 aa17.86■□□□□ 0.45
HDAC8-210ENST00000412342 NHSQ6T4R5 1651 aa17.86■□□□□ 0.45
HDAC8-210ENST00000412342 PPP2R1AP30153 589 aa17.85■□□□□ 0.45
HDAC8-210ENST00000412342 KDRP35968 1356 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 308.3 ms