RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 OVOS2Q6IE36 1432 aa22.49■■□□□ 1.19
DDR1-230ENST00000412274 COL18A1P39060 1754 aa22.49■■□□□ 1.19
DDR1-230ENST00000412274 BRWD3Q6RI45 1802 aa22.49■■□□□ 1.19
DDR1-230ENST00000412274 HSPA5P11021 654 aaKnown RBP22.48■■□□□ 1.19
DDR1-230ENST00000412274 WDR17Q8IZU2 1322 aa22.48■■□□□ 1.19
DDR1-230ENST00000412274 THSD7AQ9UPZ6 1657 aa22.48■■□□□ 1.19
DDR1-230ENST00000412274 SOX12O15370 315 aa22.47■■□□□ 1.19
DDR1-230ENST00000412274 ZRANB1Q9UGI0 708 aa22.47■■□□□ 1.19
DDR1-230ENST00000412274 USP35Q9P2H5 1018 aa22.46■■□□□ 1.19
DDR1-230ENST00000412274 C11orf95C9JLR9 678 aaPredicted RBP22.45■■□□□ 1.18
DDR1-230ENST00000412274 TOM1L2Q6ZVM7 507 aa22.45■■□□□ 1.18
DDR1-230ENST00000412274 CDCA7Q9BWT1 371 aaPredicted RBP22.45■■□□□ 1.18
DDR1-230ENST00000412274 AXIN2Q9Y2T1 843 aa22.45■■□□□ 1.18
DDR1-230ENST00000412274 BLMP54132 1417 aaPredicted RBP22.45■■□□□ 1.18
DDR1-230ENST00000412274 SF3B2Q13435 895 aaKnown RBP22.44■■□□□ 1.18
DDR1-230ENST00000412274 CARD10Q9BWT7 1032 aa22.43■■□□□ 1.18
DDR1-230ENST00000412274 FYB1O15117 783 aa22.42■■□□□ 1.18
DDR1-230ENST00000412274 CSB-PGBD3P0DP91 1061 aa22.42■■□□□ 1.18
DDR1-230ENST00000412274 PDE3BQ13370 1112 aa22.42■■□□□ 1.18
DDR1-230ENST00000412274 MYOM1P52179 1685 aa22.42■■□□□ 1.18
DDR1-230ENST00000412274 CCDC7Q96M83 1385 aa22.4■■□□□ 1.18
DDR1-230ENST00000412274 FAM196AQ6ZSG2 479 aa22.4■■□□□ 1.18
DDR1-230ENST00000412274 LTN1O94822 1766 aa22.4■■□□□ 1.18
DDR1-230ENST00000412274 EP400Q96L91 3159 aa22.39■■□□□ 1.18
DDR1-230ENST00000412274 IP6K1Q92551 441 aa22.39■■□□□ 1.17
DDR1-230ENST00000412274 ERBB3P21860 1342 aa22.38■■□□□ 1.17
DDR1-230ENST00000412274 PARP4Q9UKK3 1724 aaKnown RBP22.37■■□□□ 1.17
DDR1-230ENST00000412274 CARD14Q9BXL6 1004 aa22.37■■□□□ 1.17
DDR1-230ENST00000412274 NSD3Q9BZ95 1437 aa22.37■■□□□ 1.17
DDR1-230ENST00000412274 RGPD5Q99666 1765 aa22.37■■□□□ 1.17
DDR1-230ENST00000412274 CGNL1Q0VF96 1302 aa22.36■■□□□ 1.17
DDR1-230ENST00000412274 POLR3GLQ9BT43 218 aa22.36■■□□□ 1.17
DDR1-230ENST00000412274 GGNBP2Q9H3C7 697 aa22.36■■□□□ 1.17
DDR1-230ENST00000412274 RTL1A6NKG5 1358 aa22.36■■□□□ 1.17
DDR1-230ENST00000412274 KIF20BQ96Q89 1820 aa22.36■■□□□ 1.17
DDR1-230ENST00000412274 AMPHP49418 695 aa22.35■■□□□ 1.17
DDR1-230ENST00000412274 KIF24Q5T7B8 1368 aa22.35■■□□□ 1.17
DDR1-230ENST00000412274 DDB1Q16531 1140 aa22.34■■□□□ 1.17
DDR1-230ENST00000412274 ANKRD24Q8TF21 1146 aa22.34■■□□□ 1.17
DDR1-230ENST00000412274 MAP3K19Q56UN5 1328 aa22.33■■□□□ 1.17
DDR1-230ENST00000412274 BAG6P46379 1132 aa22.32■■□□□ 1.16
DDR1-230ENST00000412274 RGPD1P0DJD0 1748 aa22.31■■□□□ 1.16
DDR1-230ENST00000412274 FAM208AQ9UK61 1670 aaKnown RBP22.31■■□□□ 1.16
DDR1-230ENST00000412274 HOXC9P31274 260 aa22.31■■□□□ 1.16
DDR1-230ENST00000412274 NLRP2Q9NX02 1062 aa22.31■■□□□ 1.16
DDR1-230ENST00000412274 EXOC5O00471 708 aa22.3■■□□□ 1.16
DDR1-230ENST00000412274 WNK3Q9BYP7 1800 aa22.29■■□□□ 1.16
DDR1-230ENST00000412274 DISP2A7MBM2 1401 aa22.29■■□□□ 1.16
DDR1-230ENST00000412274 PANK3Q9H999 370 aa22.28■■□□□ 1.16
DDR1-230ENST00000412274 OVOS2A0A0G2JMS6 1433 aa22.28■■□□□ 1.16
DDR1-230ENST00000412274 NSD2O96028 1365 aa22.27■■□□□ 1.16
DDR1-230ENST00000412274 FAM182BQ5T319 152 aa22.27■■□□□ 1.16
DDR1-230ENST00000412274 SMG6Q86US8 1419 aaKnown RBP22.27■■□□□ 1.16
DDR1-230ENST00000412274 LRRC37A3O60309 1634 aa22.27■■□□□ 1.16
DDR1-230ENST00000412274 BCL9O00512 1426 aa22.26■■□□□ 1.15
DDR1-230ENST00000412274 IL2RBP14784 551 aa22.26■■□□□ 1.15
DDR1-230ENST00000412274 FLT4P35916 1363 aa22.25■■□□□ 1.15
DDR1-230ENST00000412274 RRS1Q15050 365 aaKnown RBP22.25■■□□□ 1.15
DDR1-230ENST00000412274 INSRP06213 1382 aa22.25■■□□□ 1.15
DDR1-230ENST00000412274 DEFB132Q7Z7B7 95 aa22.23■■□□□ 1.15
DDR1-230ENST00000412274 KNSTRNQ9Y448 316 aa22.23■■□□□ 1.15
DDR1-230ENST00000412274 KIF7Q2M1P5 1343 aa22.23■■□□□ 1.15
DDR1-230ENST00000412274 PARD3Q8TEW0 1356 aa22.23■■□□□ 1.15
DDR1-230ENST00000412274 TRIM37O94972 964 aa22.22■■□□□ 1.15
DDR1-230ENST00000412274 FBLN1P23142 703 aa22.22■■□□□ 1.15
DDR1-230ENST00000412274 LTV1Q96GA3 475 aaPredicted RBP22.22■■□□□ 1.15
DDR1-230ENST00000412274 TNS2Q63HR2 1409 aa22.22■■□□□ 1.15
DDR1-230ENST00000412274 ANKRD26Q9UPS8 1709 aa22.21■■□□□ 1.15
DDR1-230ENST00000412274 MARCH10Q8NA82 808 aaPredicted RBP22.2■■□□□ 1.14
DDR1-230ENST00000412274 PEAK1Q9H792 1746 aa22.2■■□□□ 1.14
DDR1-230ENST00000412274 TNS1Q9HBL0 1735 aaKnown RBP22.2■■□□□ 1.14
DDR1-230ENST00000412274 APBA3O96018 575 aa22.19■■□□□ 1.14
DDR1-230ENST00000412274 WASHC2AQ641Q2 1341 aa22.18■■□□□ 1.14
DDR1-230ENST00000412274 HSP90AB2PQ58FF8 381 aa22.17■■□□□ 1.14
DDR1-230ENST00000412274 BCL11BQ9C0K0 894 aaPredicted RBP22.17■■□□□ 1.14
DDR1-230ENST00000412274 EN1Q05925 392 aaPredicted RBP22.16■■□□□ 1.14
DDR1-230ENST00000412274 POLKQ9UBT6 870 aa22.15■■□□□ 1.14
DDR1-230ENST00000412274 EMILIN1Q9Y6C2 1016 aa22.15■■□□□ 1.14
DDR1-230ENST00000412274 PPM1GO15355 546 aaPredicted RBP22.14■■□□□ 1.13
DDR1-230ENST00000412274 NBPF6Q5VWK0 638 aa22.14■■□□□ 1.13
DDR1-230ENST00000412274 MORC1Q86VD1 984 aa22.14■■□□□ 1.13
DDR1-230ENST00000412274 NBPF4Q96M43 638 aa22.14■■□□□ 1.13
DDR1-230ENST00000412274 CAMKK2Q96RR4 588 aa22.14■■□□□ 1.13
DDR1-230ENST00000412274 MAP2P11137 1827 aaKnown RBP22.14■■□□□ 1.13
DDR1-230ENST00000412274 PLSCR1O15162 318 aa22.13■■□□□ 1.13
DDR1-230ENST00000412274 RAPGEF4Q8WZA2 1011 aa22.13■■□□□ 1.13
DDR1-230ENST00000412274 SBF2Q86WG5 1849 aa22.12■■□□□ 1.13
DDR1-230ENST00000412274 ZCRB1Q8TBF4 217 aaKnown RBP22.11■■□□□ 1.13
DDR1-230ENST00000412274 TATP17735 454 aaPredicted RBP22.1■■□□□ 1.13
DDR1-230ENST00000412274 EZH2Q15910 746 aaKnown RBP22.1■■□□□ 1.13
DDR1-230ENST00000412274 AMER1Q5JTC6 1135 aaPredicted RBP22.1■■□□□ 1.13
DDR1-230ENST00000412274 RGPD3A6NKT7 1758 aaPredicted RBP22.1■■□□□ 1.13
DDR1-230ENST00000412274 RGPD4Q7Z3J3 1758 aa22.1■■□□□ 1.13
DDR1-230ENST00000412274 PER1O15534 1290 aaPredicted RBP22.09■■□□□ 1.13
DDR1-230ENST00000412274 TNNT2P45379 298 aaPredicted RBP22.08■■□□□ 1.13
DDR1-230ENST00000412274 NPC1L1Q9UHC9 1359 aa22.08■■□□□ 1.12
DDR1-230ENST00000412274 RGPD2P0DJD1 1756 aa22.07■■□□□ 1.12
DDR1-230ENST00000412274 NBPF14Q5TI25 921 aa22.07■■□□□ 1.12
DDR1-230ENST00000412274 DDX54Q8TDD1 881 aaKnown RBP22.07■■□□□ 1.12
DDR1-230ENST00000412274 PLEKHG2Q9H7P9 1386 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms