RNA–Protein interactions for RNA: ENST00000411836.1

LSM12P1-201, Transcript of LSM12 pseudogene 1, humanhuman

BASIC

Gene LSM12P1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12P1-201ENST00000411836 ONECUT3O60422 494 aaPredicted RBP28.19■■■□□ 2.1
LSM12P1-201ENST00000411836 CSB-PGBD3P0DP91 1061 aa28.19■■■□□ 2.1
LSM12P1-201ENST00000411836 COL5A2P05997 1499 aaPredicted RBP28.19■■■□□ 2.1
LSM12P1-201ENST00000411836 C11orf95C9JLR9 678 aaPredicted RBP28.18■■■□□ 2.1
LSM12P1-201ENST00000411836 AXIN2Q9Y2T1 843 aa28.18■■■□□ 2.1
LSM12P1-201ENST00000411836 USP54Q70EL1 1684 aa28.17■■■□□ 2.1
LSM12P1-201ENST00000411836 TOM1L2Q6ZVM7 507 aa28.17■■■□□ 2.1
LSM12P1-201ENST00000411836 PANK3Q9H999 370 aa28.16■■■□□ 2.1
LSM12P1-201ENST00000411836 TCP11L2Q8N4U5 519 aa28.15■■■□□ 2.1
LSM12P1-201ENST00000411836 UPF1Q92900 1129 aaKnown RBP eCLIP28.15■■■□□ 2.1
LSM12P1-201ENST00000411836 CGNL1Q0VF96 1302 aa28.15■■■□□ 2.1
LSM12P1-201ENST00000411836 CRB1P82279 1406 aa28.13■■■□□ 2.09
LSM12P1-201ENST00000411836 KRT27Q7Z3Y8 459 aa28.13■■■□□ 2.09
LSM12P1-201ENST00000411836 THRAP3Q9Y2W1 955 aaKnown RBP28.12■■■□□ 2.09
LSM12P1-201ENST00000411836 KIF7Q2M1P5 1343 aa28.12■■■□□ 2.09
LSM12P1-201ENST00000411836 WDR17Q8IZU2 1322 aa28.12■■■□□ 2.09
LSM12P1-201ENST00000411836 AMPHP49418 695 aa28.11■■■□□ 2.09
LSM12P1-201ENST00000411836 BARGINQ6ZT62 677 aa28.11■■■□□ 2.09
LSM12P1-201ENST00000411836 COL18A1P39060 1754 aa28.11■■■□□ 2.09
LSM12P1-201ENST00000411836 FBLN1P23142 703 aa28.09■■■□□ 2.09
LSM12P1-201ENST00000411836 ABCC6O95255 1503 aa28.08■■■□□ 2.08
LSM12P1-201ENST00000411836 KIF20BQ96Q89 1820 aa28.07■■■□□ 2.08
LSM12P1-201ENST00000411836 IP6K1Q92551 441 aa28.07■■■□□ 2.08
LSM12P1-201ENST00000411836 MAP3K19Q56UN5 1328 aa28.07■■■□□ 2.08
LSM12P1-201ENST00000411836 LTN1O94822 1766 aa28.06■■■□□ 2.08
LSM12P1-201ENST00000411836 ANKRD24Q8TF21 1146 aa28.06■■■□□ 2.08
LSM12P1-201ENST00000411836 RRS1Q15050 365 aaKnown RBP28.05■■■□□ 2.08
LSM12P1-201ENST00000411836 LTV1Q96GA3 475 aaPredicted RBP28.05■■■□□ 2.08
LSM12P1-201ENST00000411836 CARD10Q9BWT7 1032 aa28.05■■■□□ 2.08
LSM12P1-201ENST00000411836 NLRP2Q9NX02 1062 aa28.05■■■□□ 2.08
LSM12P1-201ENST00000411836 PDE3BQ13370 1112 aa28.04■■■□□ 2.08
LSM12P1-201ENST00000411836 KNSTRNQ9Y448 316 aa28.04■■■□□ 2.08
LSM12P1-201ENST00000411836 BRWD3Q6RI45 1802 aa28.04■■■□□ 2.08
LSM12P1-201ENST00000411836 RGPD5Q99666 1765 aa28.04■■■□□ 2.08
LSM12P1-201ENST00000411836 ERBB3P21860 1342 aa28.03■■■□□ 2.08
LSM12P1-201ENST00000411836 BLMP54132 1417 aaPredicted RBP28.02■■■□□ 2.08
LSM12P1-201ENST00000411836 HOXC9P31274 260 aa28.02■■■□□ 2.08
LSM12P1-201ENST00000411836 THSD7AQ9UPZ6 1657 aa28■■■□□ 2.07
LSM12P1-201ENST00000411836 CDCA7Q9BWT1 371 aaPredicted RBP28■■■□□ 2.07
LSM12P1-201ENST00000411836 CCDC7Q96M83 1385 aa27.99■■■□□ 2.07
LSM12P1-201ENST00000411836 FAM182BQ5T319 152 aa27.99■■■□□ 2.07
LSM12P1-201ENST00000411836 CCDC125Q86Z20 511 aa27.99■■■□□ 2.07
LSM12P1-201ENST00000411836 PPM1GO15355 546 aaPredicted RBP27.98■■■□□ 2.07
LSM12P1-201ENST00000411836 TNNT2P45379 298 aaPredicted RBP27.98■■■□□ 2.07
LSM12P1-201ENST00000411836 SF3B2Q13435 895 aaKnown RBP27.98■■■□□ 2.07
LSM12P1-201ENST00000411836 RTL1A6NKG5 1358 aa27.98■■■□□ 2.07
LSM12P1-201ENST00000411836 WASHC2AQ641Q2 1341 aa27.96■■■□□ 2.07
LSM12P1-201ENST00000411836 DDB1Q16531 1140 aa27.96■■■□□ 2.07
LSM12P1-201ENST00000411836 NSD2O96028 1365 aa27.95■■■□□ 2.06
LSM12P1-201ENST00000411836 MORC1Q86VD1 984 aa27.94■■■□□ 2.06
LSM12P1-201ENST00000411836 FAM196AQ6ZSG2 479 aa27.93■■■□□ 2.06
LSM12P1-201ENST00000411836 EMILIN1Q9Y6C2 1016 aa27.93■■■□□ 2.06
LSM12P1-201ENST00000411836 SMG6Q86US8 1419 aaKnown RBP27.92■■■□□ 2.06
LSM12P1-201ENST00000411836 FLT4P35916 1363 aa27.92■■■□□ 2.06
LSM12P1-201ENST00000411836 KIF24Q5T7B8 1368 aa27.92■■■□□ 2.06
LSM12P1-201ENST00000411836 EXOC5O00471 708 aa27.91■■■□□ 2.06
LSM12P1-201ENST00000411836 HSP90AB2PQ58FF8 381 aa27.91■■■□□ 2.06
LSM12P1-201ENST00000411836 IL2RBP14784 551 aa27.9■■■□□ 2.06
LSM12P1-201ENST00000411836 INSRP06213 1382 aa27.88■■■□□ 2.05
LSM12P1-201ENST00000411836 PARP4Q9UKK3 1724 aaKnown RBP27.87■■■□□ 2.05
LSM12P1-201ENST00000411836 ZEB1P37275 1124 aaPredicted RBP27.87■■■□□ 2.05
LSM12P1-201ENST00000411836 POLKQ9UBT6 870 aa27.86■■■□□ 2.05
LSM12P1-201ENST00000411836 ANKRD26Q9UPS8 1709 aa27.86■■■□□ 2.05
LSM12P1-201ENST00000411836 AMER1Q5JTC6 1135 aaPredicted RBP27.85■■■□□ 2.05
LSM12P1-201ENST00000411836 DISP2A7MBM2 1401 aa27.84■■■□□ 2.05
LSM12P1-201ENST00000411836 CNGB1Q14028 1251 aaPredicted RBP27.84■■■□□ 2.05
LSM12P1-201ENST00000411836 FAM208AQ9UK61 1670 aaKnown RBP27.84■■■□□ 2.05
LSM12P1-201ENST00000411836 PER1O15534 1290 aaPredicted RBP27.83■■■□□ 2.05
LSM12P1-201ENST00000411836 TRIM37O94972 964 aa27.83■■■□□ 2.05
LSM12P1-201ENST00000411836 CC2D1BQ5T0F9 858 aaKnown RBP27.83■■■□□ 2.05
LSM12P1-201ENST00000411836 BAG6P46379 1132 aa27.82■■■□□ 2.04
LSM12P1-201ENST00000411836 NBPF6Q5VWK0 638 aa27.82■■■□□ 2.04
LSM12P1-201ENST00000411836 NBPF4Q96M43 638 aa27.82■■■□□ 2.04
LSM12P1-201ENST00000411836 LRRC37A3O60309 1634 aa27.81■■■□□ 2.04
LSM12P1-201ENST00000411836 PEAK1Q9H792 1746 aa27.81■■■□□ 2.04
LSM12P1-201ENST00000411836 WNK3Q9BYP7 1800 aa27.81■■■□□ 2.04
LSM12P1-201ENST00000411836 EP400Q96L91 3159 aa27.81■■■□□ 2.04
LSM12P1-201ENST00000411836 OVOS2A0A0G2JMS6 1433 aa27.81■■■□□ 2.04
LSM12P1-201ENST00000411836 DEFB132Q7Z7B7 95 aa27.8■■■□□ 2.04
LSM12P1-201ENST00000411836 USHBP1Q8N6Y0 703 aa27.8■■■□□ 2.04
LSM12P1-201ENST00000411836 MARCH10Q8NA82 808 aaPredicted RBP27.8■■■□□ 2.04
LSM12P1-201ENST00000411836 MAP2P11137 1827 aaKnown RBP27.79■■■□□ 2.04
LSM12P1-201ENST00000411836 RAPGEF4Q8WZA2 1011 aa27.79■■■□□ 2.04
LSM12P1-201ENST00000411836 TNS2Q63HR2 1409 aa27.77■■■□□ 2.04
LSM12P1-201ENST00000411836 APBA3O96018 575 aa27.75■■■□□ 2.03
LSM12P1-201ENST00000411836 TATP17735 454 aaPredicted RBP27.74■■■□□ 2.03
LSM12P1-201ENST00000411836 DDX54Q8TDD1 881 aaKnown RBP27.74■■■□□ 2.03
LSM12P1-201ENST00000411836 RGPD1P0DJD0 1748 aa27.74■■■□□ 2.03
LSM12P1-201ENST00000411836 RGPD2P0DJD1 1756 aa27.73■■■□□ 2.03
LSM12P1-201ENST00000411836 EIF4A2Q14240 407 aaKnown RBP27.72■■■□□ 2.03
LSM12P1-201ENST00000411836 ZCRB1Q8TBF4 217 aaKnown RBP27.72■■■□□ 2.03
LSM12P1-201ENST00000411836 EN1Q05925 392 aaPredicted RBP27.71■■■□□ 2.03
LSM12P1-201ENST00000411836 NPC1L1Q9UHC9 1359 aa27.71■■■□□ 2.03
LSM12P1-201ENST00000411836 EYA1Q99502 592 aa27.69■■■□□ 2.02
LSM12P1-201ENST00000411836 MTHFSP49914 203 aa27.68■■■□□ 2.02
LSM12P1-201ENST00000411836 MEGF6O75095 1541 aa27.67■■■□□ 2.02
LSM12P1-201ENST00000411836 BCL11BQ9C0K0 894 aaPredicted RBP27.67■■■□□ 2.02
LSM12P1-201ENST00000411836 BCL9O00512 1426 aa27.66■■■□□ 2.02
LSM12P1-201ENST00000411836 ACSBG1Q96GR2 724 aa27.65■■■□□ 2.02
LSM12P1-201ENST00000411836 EZH2Q15910 746 aaKnown RBP27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms