RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 PODXL2Q9NZ53 605 aa9.29□□□□□ -0.92
LSM5-206ENST00000409987 USTQ9Y2C2 406 aa9.29□□□□□ -0.92
LSM5-206ENST00000409987 CARNS1A5YM72 827 aa9.28□□□□□ -0.92
LSM5-206ENST00000409987 GIGYF1O75420 1035 aaPredicted RBP9.28□□□□□ -0.92
LSM5-206ENST00000409987 GGCXP38435 758 aa9.28□□□□□ -0.92
LSM5-206ENST00000409987 TRIM32Q13049 653 aa9.28□□□□□ -0.92
LSM5-206ENST00000409987 NCOA4Q13772 614 aa9.28□□□□□ -0.92
LSM5-206ENST00000409987 PPP1R18Q6NYC8 613 aa9.28□□□□□ -0.92
LSM5-206ENST00000409987 TRAF7Q6Q0C0 670 aa9.28□□□□□ -0.92
LSM5-206ENST00000409987 ZBTB24O43167 697 aaPredicted RBP9.27□□□□□ -0.93
LSM5-206ENST00000409987 SKOR1P84550 965 aa9.27□□□□□ -0.93
LSM5-206ENST00000409987 SLC10A4Q96EP9 437 aa9.27□□□□□ -0.93
LSM5-206ENST00000409987 CCDC85AQ96PX6 553 aaPredicted RBP9.27□□□□□ -0.93
LSM5-206ENST00000409987 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.27□□□□□ -0.93
LSM5-206ENST00000409987 PDE4CQ08493 712 aa9.26□□□□□ -0.93
LSM5-206ENST00000409987 MAP7D1Q3KQU3 841 aa9.26□□□□□ -0.93
LSM5-206ENST00000409987 TRMT44Q8IYL2 757 aaKnown RBP9.26□□□□□ -0.93
LSM5-206ENST00000409987 MKRN1Q9UHC7 482 aaKnown RBP9.26□□□□□ -0.93
LSM5-206ENST00000409987 TMEM88BA6NKF7 163 aa9.25□□□□□ -0.93
LSM5-206ENST00000409987 KCTD17Q8N5Z5 321 aa9.25□□□□□ -0.93
LSM5-206ENST00000409987 ZMIZ1Q9ULJ6 1067 aa9.25□□□□□ -0.93
LSM5-206ENST00000409987 ZBTB7CA1YPR0 619 aa9.24□□□□□ -0.93
LSM5-206ENST00000409987 ESPNB1AK53 854 aa9.24□□□□□ -0.93
LSM5-206ENST00000409987 LZTS3O60299 673 aaPredicted RBP9.24□□□□□ -0.93
LSM5-206ENST00000409987 ELOAQ14241 798 aaKnown RBP9.24□□□□□ -0.93
LSM5-206ENST00000409987 CRTC2Q53ET0 693 aaPredicted RBP9.24□□□□□ -0.93
LSM5-206ENST00000409987 AEBP1Q8IUX7 1158 aa9.24□□□□□ -0.93
LSM5-206ENST00000409987 RPIAP49247 311 aa9.23□□□□□ -0.93
LSM5-206ENST00000409987 WNT7BP56706 349 aa9.23□□□□□ -0.93
LSM5-206ENST00000409987 EML3Q32P44 896 aa9.23□□□□□ -0.93
LSM5-206ENST00000409987 STK32AQ8WU08 396 aa9.23□□□□□ -0.93
LSM5-206ENST00000409987 NOVA2Q9UNW9 492 aaKnown RBP9.23□□□□□ -0.93
LSM5-206ENST00000409987 DOLKQ9UPQ8 538 aa9.23□□□□□ -0.93
LSM5-206ENST00000409987 FAM196BA6NMK8 535 aa9.22□□□□□ -0.93
LSM5-206ENST00000409987 USP17L15C9J2P7 530 aa9.22□□□□□ -0.93
LSM5-206ENST00000409987 USP17L10C9JJH3 530 aa9.22□□□□□ -0.93
LSM5-206ENST00000409987 USP17L13C9JLJ4 530 aa9.22□□□□□ -0.93
LSM5-206ENST00000409987 USP17L12C9JPN9 530 aa9.22□□□□□ -0.93
LSM5-206ENST00000409987 USP17L11C9JVI0 530 aa9.22□□□□□ -0.93
LSM5-206ENST00000409987 USP17L21D6R901 530 aa9.22□□□□□ -0.93
LSM5-206ENST00000409987 USP17L18D6R9N7 530 aa9.22□□□□□ -0.93
LSM5-206ENST00000409987 USP17L22D6RA61 530 aa9.22□□□□□ -0.93
LSM5-206ENST00000409987 USP17L17D6RBQ6 530 aa9.22□□□□□ -0.93
LSM5-206ENST00000409987 USP17L19D6RCP7 530 aa9.22□□□□□ -0.93
LSM5-206ENST00000409987 USP17L20D6RJB6 530 aa9.22□□□□□ -0.93
LSM5-206ENST00000409987 ATP5J2-PTCD1G3V325 749 aa9.22□□□□□ -0.93
LSM5-206ENST00000409987 USP17L24Q0WX57 530 aa9.22□□□□□ -0.93
LSM5-206ENST00000409987 NBPF20Q3BBV1 942 aa9.22□□□□□ -0.93
LSM5-206ENST00000409987 RASA1P20936 1047 aa9.21□□□□□ -0.94
LSM5-206ENST00000409987 VARSP26640 1264 aaKnown RBP9.21□□□□□ -0.94
LSM5-206ENST00000409987 PTK7Q13308 1070 aa9.21□□□□□ -0.94
LSM5-206ENST00000409987 TMEM164Q5U3C3 297 aa9.21□□□□□ -0.94
LSM5-206ENST00000409987 RNF20Q5VTR2 975 aa9.21□□□□□ -0.94
LSM5-206ENST00000409987 LIAT1Q6ZQX7 453 aa9.21□□□□□ -0.94
LSM5-206ENST00000409987 EMID1Q96A84 441 aaPredicted RBP9.21□□□□□ -0.94
LSM5-206ENST00000409987 CDCA7Q9BWT1 371 aaPredicted RBP9.21□□□□□ -0.94
LSM5-206ENST00000409987 CDV3Q9UKY7 258 aaKnown RBP9.21□□□□□ -0.94
LSM5-206ENST00000409987 OXLD1Q5BKU9 147 aa9.2□□□□□ -0.94
LSM5-206ENST00000409987 LARP1Q6PKG0 1096 aaKnown RBP9.2□□□□□ -0.94
LSM5-206ENST00000409987 KCTD15Q96SI1 283 aaPredicted RBP9.2□□□□□ -0.94
LSM5-206ENST00000409987 NOD1Q9Y239 953 aa9.2□□□□□ -0.94
LSM5-206ENST00000409987 CLDN10P78369 228 aa9.19□□□□□ -0.94
LSM5-206ENST00000409987 SEPT12Q8IYM1 358 aa9.19□□□□□ -0.94
LSM5-206ENST00000409987 OGFOD1Q8N543 542 aa9.19□□□□□ -0.94
LSM5-206ENST00000409987 PCDHB11Q9Y5F2 797 aa9.19□□□□□ -0.94
LSM5-206ENST00000409987 BRD1O95696 1058 aa9.18□□□□□ -0.94
LSM5-206ENST00000409987 RC3H1Q5TC82 1133 aaKnown RBP9.18□□□□□ -0.94
LSM5-206ENST00000409987 TRIM50Q86XT4 487 aa9.18□□□□□ -0.94
LSM5-206ENST00000409987 EHBP1Q8NDI1 1231 aa9.18□□□□□ -0.94
LSM5-206ENST00000409987 MAP4K5Q9Y4K4 846 aa9.18□□□□□ -0.94
LSM5-206ENST00000409987 CD2BP2O95400 341 aaKnown RBP9.17□□□□□ -0.94
LSM5-206ENST00000409987 RAB15P59190 212 aa9.17□□□□□ -0.94
LSM5-206ENST00000409987 INTS6LQ5JSJ4 861 aaKnown RBP9.17□□□□□ -0.94
LSM5-206ENST00000409987 VASH1Q7L8A9 365 aaPredicted RBP9.17□□□□□ -0.94
LSM5-206ENST00000409987 DNAAF2Q9NVR5 837 aaKnown RBP9.17□□□□□ -0.94
LSM5-206ENST00000409987 KIAA1024Q9UPX6 916 aa9.17□□□□□ -0.94
LSM5-206ENST00000409987 ZBTB7BO15156 539 aaPredicted RBP9.16□□□□□ -0.94
LSM5-206ENST00000409987 DKK1O94907 266 aa9.16□□□□□ -0.94
LSM5-206ENST00000409987 GTF2IP78347 998 aa9.16□□□□□ -0.94
LSM5-206ENST00000409987 IFFO2Q5TF58 517 aa9.16□□□□□ -0.94
LSM5-206ENST00000409987 ANKMY2Q8IV38 441 aa9.16□□□□□ -0.94
LSM5-206ENST00000409987 ZNF594Q96JF6 807 aaPredicted RBP9.16□□□□□ -0.94
LSM5-206ENST00000409987 ATP1A2P50993 1020 aa9.15□□□□□ -0.94
LSM5-206ENST00000409987 FAM69CQ0P6D2 419 aa9.15□□□□□ -0.94
LSM5-206ENST00000409987 DPYDQ12882 1025 aa9.15□□□□□ -0.94
LSM5-206ENST00000409987 CCDC125Q86Z20 511 aa9.15□□□□□ -0.94
LSM5-206ENST00000409987 FAM200AQ8TCP9 573 aa9.15□□□□□ -0.94
LSM5-206ENST00000409987 CDK15Q96Q40 435 aa9.15□□□□□ -0.94
LSM5-206ENST00000409987 SLAIN2Q9P270 581 aa9.15□□□□□ -0.94
LSM5-206ENST00000409987 TLL2Q9Y6L7 1015 aa9.15□□□□□ -0.94
LSM5-206ENST00000409987 ERVH48-1M5A8F1 160 aa9.14□□□□□ -0.95
LSM5-206ENST00000409987 KCNA1Q09470 495 aa9.14□□□□□ -0.95
LSM5-206ENST00000409987 ARID5BQ14865 1188 aa9.14□□□□□ -0.95
LSM5-206ENST00000409987 SIX5Q8N196 739 aa9.14□□□□□ -0.95
LSM5-206ENST00000409987 LARGE2Q8N3Y3 721 aa9.14□□□□□ -0.95
LSM5-206ENST00000409987 PCDHGA11Q9Y5H2 935 aa9.14□□□□□ -0.95
LSM5-206ENST00000409987 SIAH2O43255 324 aa9.13□□□□□ -0.95
LSM5-206ENST00000409987 GRM5P41594 1212 aa9.13□□□□□ -0.95
LSM5-206ENST00000409987 USP4Q13107 963 aa9.13□□□□□ -0.95
LSM5-206ENST00000409987 SLC19A1P41440 591 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms